Polypterus senegalus (gray bichir): 120541172
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Entry
120541172 CDS
T08668
Symbol
sec31b
Name
(RefSeq) protein transport protein Sec31A isoform X1
KO
K14005
protein transport protein SEC31
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120541172 (sec31b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120541172 (sec31b)
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psex02044
]
120541172 (sec31b)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120541172 (sec31b)
Secretion system [BR:
psex02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
120541172 (sec31b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40
Beta-prop_TEP1_2nd
EIF3I
WDR55
Beta-prop_EIPR1
Beta-prop_EML
TPR_Sec16
Beta-prop_WDR35_TULP_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_HPS5
MIOS_WD40
Prp18
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120541172
NCBI-ProteinID:
XP_039628494
LinkDB
All DBs
Position
1:257991751..258119141
Genome browser
AA seq
1236 aa
AA seq
DB search
MKLKEILRTANQAWSSSLQHPVYLATGTSAQQLDASFSTTSALEIFELDFSDPSLDMKPR
GSLSITNRFHSLIWVNYDMDKAEAPGLLIGGGDNGVVTVYNPSKILATEKDTIVGQCEKH
KGPVRALDFNPFQNNLLASGANDSEIYIWDLNNFCNPMTPGAKSQPYEDVSVVAWNRQVQ
HILASAHPSGKAVVWDLRKNEPIIKISDHSNKMHCSGMLWHPEVATQLVLASEDDRLPVI
QIWDLRFATSPLKVLENHTRGILSISWSNADPELLLSSAKDNRILCWNPNTGEVIYELPT
SSQWCFDVQWCPRNPAILSAASFDGRISIYSVMGGCLMAQEQSSSDKISSSFSTTDHLGT
GLSLPPLQIPQKVTHSTVIPPLKKPPKWIRRPVGAVFAFGGKLITFENPKVLQHQQAQTS
VPHHVCISQITTETEFLQQASDLQTALRTGSFSSFCQGKIHSATTDSEQSVWSFLKVNFE
DNPRTKFLKLLGYSREELDKKISMCLGKSLHLTSHGIDANDLAEKIQVLSAQQLDESSST
GDTLSSPASSSPSDFYGSFPNDKTKFQIPITSDTDGLISQALLIGNFEGAVELCLNDGRY
ADAIILAISGGEELLRKTQKRYLAKQKNSISMLMSTVVNQNWTDIVQLCDLQNWKEALAA
LLTYARPDEFSKLCDTLGSRLEFEGENSMCLEACLCYICSGNVEKLVECWVQKQECLSPL
ALEGVVEMMTILRKSIEKLQGSDVPFQGPVLAEKLTQYAHLLAAQGNLAAALTFLPTDSS
LISIMQLRDRLFYAQGEAVAGQQPPPFPYNRINVTAVKQPVDSTQNTNPKTNMPVSFQPT
PISLVPATSQPSHPKGFSQQSVQSPVVQTFPPVGIPAASQRAPSGMYIKPTACPMYPQPS
MSASGLPQPPPFSQPRDFPSGQPTIPAQHPLMPSAVPAAPSGSLIGLPSSSLSGPSFIPP
SSLPSYQLSGPTFHSSQLPCTQPVFPGSIHTPASMAASEPSVTYPVGPGFPYGGPGAPAA
SPLVPATLPPPPTGYFPWLQNRDEEGSQDGWNDPPSVHGVTRKKKLPENYTPPMPITAPV
MNPSVEHQPLQPNTSLPRESQAPPGAPKESNIQPLFQLPSEKIERKDIPQEHILLQTSFD
SLVQRCLLAAGDPQTKRKLDDASKRLEFLYDKLREQSLSPNILGGLHEIRRCIEVRNYQQ
ALLVHTQVVSSNNFSEISAFMPVLKVVMTIANKLAV
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttaaagaaatcctgaggacagccaatcaagcatggagttcttcattacaacat
ccagtatatttggcaacaggtacttcagcacagcagctagatgcctctttcagcacaact
tcagccctggagatttttgagttggatttttcagacccatcacttgacatgaagcccaga
ggatccctttccattacaaataggtttcacagtctgatctgggttaattatgacatggac
aaagctgaagctcctggattgcttataggtggaggagataatggtgtagtcactgtgtac
aacccctcaaaaattttggcaacagaaaaggacaccattgtagggcaatgcgaaaaacac
aaaggacctgtaagggctcttgactttaatccctttcagaataaccttttggcttctgga
gcaaatgattctgagatctacatttgggatttaaacaatttctgcaacccaatgacacct
ggagcaaaatcacagccttatgaagatgtcagtgttgttgcctggaacaggcaggtgcag
cacatcttggcatcagcccatcctagtggtaaggctgttgtttgggacctcagaaaaaat
gaaccaataattaaaatcagtgaccacagcaacaaaatgcattgttcaggaatgttatgg
caccctgaagttgcaacacaattggtcttagcatctgaagatgatcggttgccagttatt
cagatatgggatctgagatttgccacttcacctctcaaagtgttggaaaaccacactagg
ggaatcctttctatttcttggagcaatgctgatccagaattactcctaagcagtgcaaaa
gacaacagaatattatgttggaatccaaacacaggagaggttatttatgagcttccaaca
agtagccagtggtgttttgatgtccagtggtgtcctaggaatcctgccattctttctgct
gcttcatttgatggtcggatcagcatttattctgtaatgggtggctgtcttatggcccaa
gaacaaagcagttcagataagatttcttcatcttttagtacaacagatcaccttggaact
ggcctctctctgccaccattacagattccacagaaggtgacacattcaacagttatccca
ccattgaagaaacctccaaaatggattagaaggccagttggagctgtttttgcttttggt
gggaagctgataacctttgaaaatcctaaagttttacagcaccagcaggcccagacttct
gttccacatcatgtgtgcattagccagatcacaacagaaactgagtttcttcaacaagcc
agtgacttgcaaactgcacttcgtactggcagcttctcaagtttttgccaaggcaagatt
catagtgcaacaaccgattccgaacaaagcgtttggagtttcctaaaggtcaattttgaa
gataatcctagaactaaattcttgaagcttttaggctacagcagagaagaacttgataaa
aagatttcaatgtgtttaggaaaatctttgcatctaactagtcatggaattgatgcgaat
gacttggctgaaaagatccaggttttatctgcccagcaattagatgaatcaagttcaaca
ggagataccctgtcttcccctgcatcatcatcaccttcagatttttatggaagttttccc
aatgataagacaaagtttcaaattcccattacttcagatacagatgggttaatcagccaa
gcccttttgattggtaactttgaaggagcagtggagctctgcttgaatgatggcagatat
gcagatgcaatcatcttggcaataagtggaggggaagaactgctgaggaagacacaaaag
agatacttagccaagcagaagaacagcatttcaatgctcatgtctactgtagttaatcag
aactggacagacatagtacagttatgtgacttacagaactggaaagaagctttggctgca
ttgctaacctatgctcgtccagatgaattctcgaaactgtgtgataccttgggatctcgc
ttggaatttgagggagaaaattcaatgtgccttgaggcatgtttgtgctatatctgctct
ggaaatgttgagaaactagttgaatgctgggttcagaaacaagaatgtttgtcaccactt
gctttagagggtgtggtagagatgatgacaattttgcgcaagtctatagaaaagcttcaa
ggtagtgatgtaccatttcaaggtccagttcttgcagagaaattgactcagtatgctcat
cttctagcagctcagggtaatcttgcagcagccttgaccttcctgcctacagactcaagt
ttaatctcaataatgcagttgagggacaggcttttttatgctcagggagaggcagttgca
ggacagcagccacctcctttcccttataaccgaatcaatgttactgcagttaaacagcct
gtagattccacacagaatacaaatccaaagaccaatatgccggtgtcatttcagccaaca
ccgatttctttggtgcctgcgaccagccagccttcacaccctaaaggttttagtcaacag
tcagtacaatcccctgtggtacagacttttccaccagttggaatacctgctgcttcccag
agagctccatctggcatgtatataaagcctacagcttgccctatgtatccacaaccttca
atgtccgcttcaggactacctcagccaccacctttcagccagcctagagattttccaagt
ggacaaccgaccattcctgctcagcatccattaatgccatctgctgtgcctgcagctccc
tcgggtagcctcataggattgcctagctccagtttatctggaccaagcttcattccccca
tcatctcttccttcttatcagttgtctggccctacgtttcattcatcccaactcccttgc
acacagcctgtattcccaggaagtatccatacccctgcctccatggcagcatcagagcca
tcagtcacttatccagttggacctggcttcccatatggtggccctggagctcctgctgca
agtccattagtaccagcaactcttcctccaccacctacaggctacttcccttggttacaa
aatcgtgatgaagaaggttctcaagatggatggaatgatcccccgtctgtgcacggagtg
acaaggaaaaagaagctacctgagaattacactccaccaatgcctatcacagcacctgtc
atgaacccttctgtggagcatcagccactgcagcccaatacttcattacctagagaaagt
caagcaccacctggagcccctaaagaatctaatatccagccattatttcagttgccttca
gaaaaaattgagaggaaggacattccacaagaacatatactgttgcaaacaagttttgat
agtttagttcaacggtgtcttctagcagctggtgatccgcaaaccaaacgtaaacttgat
gatgcttccaagcgactggaattcctttatgacaaacttagagaacagtcgctttctcct
aatatccttggaggacttcatgagattagacgttgtattgaagttcgcaactatcagcaa
gcactcttagtccacactcaggttgtcagcagcaacaactttagtgaaatttctgccttc
atgcctgttcttaaagtggtaatgacaattgcaaacaaacttgctgtctaa
DBGET
integrated database retrieval system
