Polypterus senegalus (gray bichir): 120541243
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Entry
120541243 CDS
T08668
Symbol
lrrk1
Name
(RefSeq) leucine-rich repeat serine/threonine-protein kinase 1
KO
K08843
leucine-rich repeat kinase 1 [EC:
2.7.11.1
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
psex01001
]
120541243 (lrrk1)
Enzymes [BR:
psex01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120541243 (lrrk1)
Protein kinases [BR:
psex01001
]
Serine/threonine kinases: TKL group
LRRK family
120541243 (lrrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LRR_8
COR
LRR_4
Roc
Ank_2
Ank
LRR_14
Beta-prop_LRRK2
Arf
Ras
Ank_4
Beta-prop_RSE1_2nd
Ank_KRIT1
Gtr1_RagA
TniB
MMR_HSR1
ABC_ATPase
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
120541243
NCBI-ProteinID:
XP_039628634
LinkDB
All DBs
Position
12:complement(83811146..83937704)
Genome browser
AA seq
2006 aa
AA seq
DB search
MYWSVGTSQDGIGAKDGVANQCDAEEMGSKQSFPGTATLTESLTVENIQAAYQNGDMNKA
QNLIQVCCSETEGAPLDKHHLLGVAAANGDVVSVQYLLTEVKVELSQELTDDNPAVVAAY
YGHKDIIKMLLNSVAGPCLNRDLVNWMMTVACQQGQLEIVKLLVHSYHADPESCAVRKND
FAIITGLPLYVAAQAGNEEISEFLLHNGAAISSYTLMDHPEFTEKLLKTKFVEPSCPDPD
TDCSNTLTVQWSHLKLPWLELNWFLDISSRISVLDLSANCLQTLPSIIPWGLIQLQTLNL
SDNHLKELPAIQSSDQIICTSLLQIDLSRNQLSSLPPGFLHLTSLQKLTASKNQLVNLFE
VENGVNWIGLRKLEELDVSDNLLTELPSVFTHCFKSLSYLNVSRNKLKAFPVPWACPLKS
CKISSNFIEDIPNSLTVFWKNYLRDLDISNNCLKSVPACVFQLEVLASLKVSGNQLSSLP
PPDIWTCSRMKLLDLSKNHFGKTDKGSKLPRLSFFTTLRRSSDPAYSLYLPEFLCESLEI
LFLCDNQLEAVPPSVCGLKNLSELYLSNNPGIRELPCELGQLSNLWQLDIEDLNIGNVPA
EVRKKGAAATLGFLRAQLRRAEKCKLMKLIIVGPPRQGKSTLLEALQSGKVPQAMQKEAT
ISICTWELERPSGIKSVVDSVEFSVWDIGGPASMSTVNQCFFTDKALYVVVWNLAMGEEA
VANLQSWLLNIEARAPNAAVLVVGTHLDLIDTKFRTERIATLRAYVLALCRSPSGSRATG
YPDITCKHLHEVSCKTLEGLDNLRRLIFQASCCVKDMSNTSGSYRFVGRLIPRSYFLLQD
AVTAEKQRRKEEDEVQYLTDLELEQIIEKNPESDIKDYEDLQSAMNFLIETGVLLHFPDT
SRGLRNLYFLDAVWLSECLERIINIKSSKSVAKNGVIKGEDLRMLLVGTGFTEQTEEQYL
QLLAKFEIALPVASNSYLLPHLLPPKPGLDIHGLRQKIANTIQRLFKMSFVPAGFWQRFI
ARMLISLTEMDLQSFESKKNAKTLRERKTVIYSFAGTQQRNRCSTFRVRRSQTIYWKEGL
LVTFSGGYLSIESSELNWKKKKSGGIKIICQSEARDFSAMAFITDHVNSLIDQWFPALRA
SENDGTLLIEQYAPCPYCAVAIKDGGEVTSKSKAIHYFNMEDCVLAAVEMDHIICPNHPS
VPVFLQELVPELFMTDFPARLFLDNSKMEYSESENSILGQGGSGTVIYKAKYRDLPVAVK
RFHFKKCKQKTSDINTDSMVKHLQSMEALRNFSEFRQEASMLHSLQHPCIVSLIGISIHP
LCFALELAPLSSLNTVLEENSKGESFIPLGHMLTFKMTYQIAAGLAYLHRKNVIFCDLKS
DNILVWSLEVTDSVIVKLSDYGISRQSFHEGALGVEGTPGYQAPEIRPGIVYDEKVDMFS
YGMVVYELLSGRRPILDQHQPQIVKKLSKGVRPILGTPEEVQFHFLHALMLECWDTKPEK
RPLANSVVKQMQDPSFPALKYLLHCEKHSYLFFPAEQDHTVMFWDMEGEERKYTVVNIEK
GVEEVKKMPCSGMKLSCQLKIANTLWTATEDQNIYIYSLKEMCPLRTAQKTLTCPAVVTC
MLLVPAKSETLPILFVGMADGLIAVYTLIADMPHENESYLCSHTINKSLFKIPDDDPRQN
PYPITVMVLVKSCSELWCSNGPGILVIDCLNLQAVRRLDPYSFPSRILSMTSNSAFGGEE
AVWCLDDKTNTLLMYHVASFQLCAKYFCGDCNPLRDMFTIQTPAAVAPQISKPTMSENLV
SDPSSPMDVSIIYSKEVGTQIIRNQDSLTDYCSLSSMSSSDLSQSSCTNGIFDSLERSSS
VTNSGSIEEVDVSHTLAFGTVVSEGEHPNQASESTEGLQSVKVLAVKDTLWIPRQKGDII
VIELENEVGTHRGRVIALLRAADMVKYGMLLDAAVIEKDTVVCGFQNENKEWCLAVWRGW
GARDFEIFYQSYEEVGRLDTSMRKRR
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atgtattggtcagtgggtaccagtcaagatggcatcggtgccaaggatggtgtggccaac
caatgtgatgctgaggaaatgggaagcaagcagtctttcccaggcactgccacactgacc
gagtcgctgacagttgaaaacatacaagctgcttaccaaaatggtgatatgaacaaagca
cagaacctcatccaagtatgctgctctgaaactgagggagcccctctggataagcatcat
cttctgggagttgcagcagcaaatggtgatgtggtgtctgtacagtacttactaacagaa
gttaaagtggagctgtcacaagagctgaccgatgataacccagctgtagtagctgcttat
tatgggcataaggacattattaaaatgcttcttaactctgtagcaggaccgtgtctcaac
agggacttagtaaattggatgatgacggtggcttgtcaacaaggacaactcgaaattgtc
aagctgctggtgcatagctatcatgctgatcctgaaagctgtgccgtgcggaaaaatgac
tttgcaatcattacaggacttccactttatgtggcagcccaagcagggaatgaagaaatt
tctgagtttctgttgcacaatggagcagcgatctcctcttacaccctgatggaccatcct
gaatttacagaaaagctccttaaaacaaagtttgtggaaccgagctgcccagaccctgac
actgactgcagtaataccctcacagtgcagtggtctcatctgaagctgccatggctggag
ttgaattggtttcttgacatttcatcaaggatttctgtgctggacctgtctgcaaactgt
cttcaaactctaccatccatcatcccttggggtcttattcaacttcagactcttaatctc
tctgacaaccacttgaaagaactccccgccatccaatcttctgatcagatcatttgcaca
agcctacttcagattgatttatcaagaaatcaactgtccagcttaccaccgggatttttg
catcttacaagtctccaaaaacttacagcatcaaagaaccagctggtaaacctgtttgaa
gttgaaaatggtgtcaactggataggactgcgtaaattagaagaacttgatgtctcggat
aatcttcttacagaactcccttctgtgttcacgcactgcttcaagtctctcagttaccta
aatgtcagccggaacaaactgaaagcgtttcctgttccgtgggcatgccccctgaaatct
tgtaaaatctcttcaaatttcattgaggacattccaaactccctgaccgttttttggaaa
aattatttacgagatcttgatatttccaataactgcctgaaaagtgtcccagcttgtgtc
tttcagttggaagttttggcatccttgaaagtgtctggaaatcagttgtcatccttaccg
cctccagatatatggacatgttctcggatgaaattacttgatttgtctaagaatcacttt
ggaaagacagacaaaggatcaaagctgccaagattaagtttcttcactactttgagaaga
agctcagatccagcttactcgttatatctccctgaattcctctgtgagtctttagaaatt
ctgttcctttgtgataaccagctggaagcagtgcctccatcagtgtgcggtttaaagaac
ttgagtgagctctacctgtcaaataaccctgggattcgagaattgccttgtgagcttggg
cagctgtcaaatctttggcagctggatatcgaagacctgaacattggtaacgttcctgcg
gaggtcagaaagaaaggtgcagctgctactttggggtttttaagggctcagctgagaaga
gcagaaaaatgcaaactgatgaagctaattatagttgggcctccgcgccaaggcaaatcc
accttactggaagctttacaatcagggaaggttccacaggccatgcagaaggaggccact
atcagcatttgcacatgggagcttgagagacctagcgggatcaaatccgtggttgattcc
gtggagttcagtgtttgggacattggaggacctgccagcatgtccaccgtcaaccagtgc
ttcttcactgacaaggctctatatgtagttgtgtggaacttggctatgggtgaggaggca
gttgccaacctgcagtcgtggctgttgaatattgaggccagagctccaaatgctgcagtg
cttgtagttggaacccacctggacctgattgacacaaagttccgcaccgaaaggattgct
actttacgggcctatgtcctggcactttgtcgatcgccatctggaagtagagcaactggg
taccccgacattacctgcaagcatctccatgaggtctcttgcaaaacactggagggcctc
gataatttgagaaggttgatcttccaggcttcctgctgtgtaaaagatatgtccaacact
tcagggtcatacagatttgtggggagactgattccaagaagttattttcttcttcaagat
gctgtgactgcagagaagcaacgccgcaaagaagaggatgaagtacagtacttaactgat
cttgagctggaacaaatcattgagaaaaatcctgaaagtgatattaaagactatgaggac
ctacaatctgccatgaatttccttattgagactggggtgctgcttcacttccctgacaca
agtcgcggtttgaggaacctttacttcttggatgcagtctggctgtctgagtgtctcgag
aggattattaatattaagagctccaagtccgtggcaaagaatggtgtgatcaagggtgaa
gacctgcggatgttgttggtgggcactggctttacagagcaaacagaggagcagtacctt
caacttttagccaagtttgaaattgcactcccagtagcaagcaacagttaccttcttcca
catctgttacctcccaaacctggactggatatccatgggctccggcaaaagatagccaac
actatccagaggctgttcaaaatgagcttcgtcccggctggcttttggcagagattcatt
gcacgcatgttgatcagtctaacggagatggacctgcagtcatttgagagcaaaaaaaat
gcaaagaccttgagagaaaggaagactgttatttatagctttgctggcacccagcagaga
aaccgctgcagcacatttcgggtaaggagaagccagacgatttactggaaggagggactg
ctggttacattcagtggcggatacctcagcattgaatcatcagagctcaactggaagaag
aaaaaaagtggaggaatcaaaattatctgccaatcagaagccagagatttttctgccatg
gcctttattactgaccatgtgaattctctaattgatcagtggtttcctgctttaagagct
agtgagaatgatggcacactcttgattgagcagtatgctccatgtccttactgtgctgtg
gctatcaaagatggaggagaggtcaccagcaaatcaaaggctatacactattttaacatg
gaagactgtgttcttgctgctgtggagatggaccacattatctgtcctaaccatccatct
gtaccagtgtttctccaggaactagtgccagaactcttcatgactgacttcccggccagg
ttgtttcttgacaacagtaaaatggaatacagtgagagtgaaaacagcatattgggccaa
ggaggcagtgggaccgttatttataaggccaaatacagagacttacctgttgctgtgaag
agattccactttaaaaagtgtaagcagaaaacctctgacattaacacagacagcatggtt
aaacatttgcaatcaatggaagcccttaggaatttttctgagttccggcaggaagccagc
atgcttcactctctacagcatccctgcatcgtatctttgattggcatcagcatccatccc
ctttgctttgccctggaactcgctcccttaagcagtcttaacacagtgttggaggagaac
tcaaagggagaatcattcatacctcttggtcacatgctcacctttaaaatgacctatcag
attgcagcaggactggcttatctgcacagaaagaatgtcattttctgtgatttaaaatct
gataacattctggtctggtccctggaggtcacagattctgttattgtcaagctttccgat
tatggtatttcccgtcagtcttttcatgagggggcactgggagtggaaggaacacctggc
taccaagcaccagaaatcagacctggcattgtctacgatgagaaggtggacatgttctct
tatggcatggtggtttacgagctactgtctggacgccgtcctattttggatcagcatcaa
ccccagattgtgaagaagttatccaagggtgtgagaccaatactaggcacccctgaagaa
gtccagttccactttctgcatgcactcatgctggagtgctgggatacaaaacctgaaaag
aggccactggccaactcagtagtaaaacagatgcaagatcctagctttccagctttgaag
tacctccttcactgtgaaaaacactcttacctcttcttccctgctgaacaagatcacacc
gtcatgttttgggatatggagggagaggaaagaaaatacactgtggtgaatatagagaag
ggtgtagaggaggtaaaaaagatgccctgcagtggaatgaaactcagctgccaactcaaa
atcgcaaacactctatggacagcaacagaggatcaaaacatttatatttacagtttaaaa
gagatgtgcccattgcgcactgcacagaagacgctcacctgtccagcagttgtaacatgc
atgcttcttgtgcctgcaaaaagtgagactttacccattttatttgttggtatggcagat
ggactcatagcagtctacacactgattgccgatatgccacatgaaaacgagtcatacttg
tgttcccacaccatcaataagtccctctttaaaattccagatgatgacccaaggcaaaat
ccttaccccatcacagtaatggtgctagtaaagagttgttctgagctgtggtgcagcaat
ggtcctggcatccttgttatagactgtctaaatctacaggcagtcagaaggctagaccca
tatagctttccatctagaattctgtccatgacatctaattctgcatttggtggagaagaa
gccgtttggtgtctggatgacaagactaacactcttttaatgtatcatgttgcttccttc
caactttgtgccaagtacttttgtggggactgcaatccactacgggatatgtttacaatt
cagacacctgccgctgtggcaccacaaatctccaaacccactatgagtgaaaatctggtg
tctgaccccagtagtcccatggatgtaagcatcatctacagtaaagaggtgggcacccag
ataattagaaaccaagactccctcacagattattgctcgctatcttccatgtcttccagt
gacttgtctcagagtagttgcaccaatggaatctttgattccctggaaaggtcctctagt
gtgaccaactcgggaagtattgaggaagtggacgtatcgcataccttggcatttggcaca
gtggtatctgaaggtgaacatcccaaccaggcatctgaatcaactgaagggctacagtct
gtgaaagtgttggcagtcaaggacaccctctggatccctaggcaaaaaggggatataata
gttattgagctggaaaacgaggtgggcacacacagaggaagagtgattgcactgctcaga
gcagctgacatggtaaaatatgggatgctactggacgcagcagtaattgaaaaggatact
gtggtgtgtggatttcagaatgaaaacaaggagtggtgcctggctgtctggagaggctgg
ggtgccagagactttgaaatcttctaccagtcctacgaggaggtgggaaggctggatacc
agcatgagaaaaagaaggtag
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integrated database retrieval system
