Polypterus senegalus (gray bichir): 120541283
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Entry
120541283 CDS
T08668
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120541283 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120541283 (efl1)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
GTPases
120541283 (efl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
EFG_IV
Motif
Other DBs
NCBI-GeneID:
120541283
NCBI-ProteinID:
XP_039628704
LinkDB
All DBs
Position
12:complement(86714744..86918547)
Genome browser
AA seq
1160 aa
AA seq
DB search
MGACLLRKSVLSLCPGFYNRVVLFSNMSHTNLEKIKALQKKTGNIRNICILAHVDHGKTT
LADSLVASNGIISSRLAGKLRYMDSREDEQIRGITMKSSAISLHFTKGDEEYLVNLIDSP
GHVDFSSEVSTAVRLCDGAIIVVDAVEGVCPQTQAVLRQAWLENIRPVLVINKIDRLIIE
LKMTTQEVYTHLQKIMEQVNAVTGSLFTSKVLEERAEKSTDCQKNSENSGAEQLYDWSAG
LEETDDSHLYFSPDQGNVVFASAIDGWGFSILQFAQLYSQKMGIRIEVLQKTLWGDFYLN
AKAKKIMKGAQCKGKKTLFVQLVLDNIWSLYEAVVIKRDKEKVEKIVSSLGLRVSDRDLR
HTDPKVLLNAICSQWLPVSQAVLTMVCDKLPSPLDMSEERVERLMCVGAQRFDSLPCQTQ
ELKKAFMECTSADTAPVIIFVSKMFAVDSKALPQNKQRPLTQEEIAQRRELARERHAKRL
ASCQDQNNQEQTPISETCGENRKVEDLGIQLESTTLSAYRPEKEDNETFVAFARVYSGTV
QTGKKMFVLGPKYDPADALTRLPPGCSATEDLPSIPHMACCTLENLFLLMGRELEVLTEV
PSGNVIGIGGLQEYVLKSATLSSSPACPPFNALNFEAAPIVRVAVEPKHPSEMPKLVQGM
KLLNQADPCVEVLIQETGEHVLVTAGEVHLQRCLDDLKERFAKIEITASEPIIPFRETVI
RPPKVDMVNEDIGKQQKVAVIHQVKEEQSKYPDGVQVDSDGLVTLTTSNKLSTIGVRAMP
LPEGVTQLLEQSTDLIRTMETYNLSVKEGRNTLAINPKTLQAIQDLKEAFKSHLQGRKWR
NAVDQIWSFGPRRYGPNILLNRIEDYKRPSVWQCLDKAANDTAAYRDFDNSIVSGFQLAT
LSGPMCEEPLMGVCFIVEKWDMNLPFSQPSQDNYVNANVSMKLHSQGEQNGGEANAEARQ
SGDEDCKPIAPVSEASPSSAAQKRKNETAGSDCYGPFSGQLIATMKDACRYAFQAKPQRL
MAAMYTCEIMATGEVLGRVYGVLSKREGRILQEEMKEGTDMFIIKAVLPVAESFGFADEI
RKRTSGLASPQLVFSHWELIQSDPFWVPTTEEEYLHFGEKADSENQARKYMNAVRKRKGL
YVEEKIVEYAEKQRTLGRNK
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgtgcctgctaagaaaaagtgttctttcgttatgtcctggtttttacaaccga
gtagttttgttttcaaatatgagccacacaaatttggaaaaaatcaaagcccttcagaag
aagaccggaaacattcgaaatatttgcatattggcccatgttgaccacgggaagacgact
ttggcagattccctcgttgcaagcaatggcatcatctcgagtcgtttggctggtaagtta
cgctacatggacagcagggaagatgaacaaattcgtggaattacaatgaagtcaagtgcc
atatcgttacattttacaaaaggtgacgaggagtaccttgtgaatctcatagactctcct
ggccatgtggatttctcatcagaggtgtcaacagcagttcggttgtgcgatggagccatt
attgtggttgatgctgtcgaaggagtctgtcctcagactcaggctgttttaaggcaagct
tggctagagaacatccggcctgttctagtaataaacaaaatagacagactgattattgag
ctcaaaatgactacacaggaagtctacactcaccttcaaaaaattatggaacaggtgaat
gcagttactgggtcactgtttacatcaaaagtgttggaagaaagagcagaaaagagcaca
gactgccagaagaactccgaaaactctggtgcagagcagctctacgattggagtgccggg
cttgaagagacggacgattcccatttgtatttttcccctgaccaaggaaacgtcgttttt
gccagtgcaatcgatggatggggtttcagcattctccagtttgcccagttgtacagtcaa
aaaatgggcatcaggatagaggtgctgcagaagactttgtggggagatttttatctcaac
gccaaagcaaagaaaatcatgaaaggagcacagtgcaaagggaaaaaaacactctttgtt
cagctggttttggacaatatttggagtctgtatgaagctgttgtaatcaaaagagacaaa
gagaaagttgagaaaattgtgagttctttgggacttagagtttcggatcgagacttgagg
catacagatcccaaagtgctcctcaacgcaatctgttcacagtggctacccgtttctcaa
gctgtgctgactatggtatgtgataaacttcctagcccactagatatgtcagaggaaaga
gtggaaagattaatgtgtgttggcgcacaaaggttcgattccctgccatgccagactcag
gagcttaaaaaggcatttatggaatgtacaagtgcagatacagccccagtcatcatattt
gtctccaagatgtttgctgttgactccaaggccttaccgcaaaacaagcaaaggccttta
actcaggaagagatagcacagagaagggagctggccagggagagacatgctaaaaggctg
gcatcgtgtcaagaccaaaacaaccaagagcaaactcctatttccgagacatgtggggaa
aaccgaaaagttgaggatctgggcattcagttggagtccactaccttgagtgcttatcga
cccgagaaagaggacaatgaaactttcgttgcttttgccagagtttacagcggaactgtg
cagacagggaaaaaaatgtttgttttgggccccaagtacgaccccgctgacgctcttacc
aggttgccccccggctgctctgctacagaagatcttccgtcgatacctcacatggcttgc
tgtaccctggagaatctctttctactgatgggtcgtgagctcgaagtgctgaccgaggta
ccctctggaaatgtcataggtatcggcggattgcaagaatacgtgttgaaatcggcaact
ttgtcgagttcacctgcctgtcctcccttcaatgctctcaactttgaagcggctcctatc
gttcgagtggccgttgagccgaagcatccaagtgagatgccaaaattagtccaagggatg
aagttgctgaatcaagccgatccgtgtgtagaggtcctcattcaagagaccggagaacac
gtgctggtcaccgccggggaggttcaccttcagagatgccttgatgacctgaaagaaagg
tttgccaagatagaaatcaccgcatcggaaccaatcatcccattcagggagacagttata
cgacccccaaaggttgatatggtgaatgaagacatcggtaaacagcagaaagttgcggtg
atccaccaggtgaaagaggaacagtccaagtatccagatggtgtccaggtagattcggat
ggattagtcacactgaccacctcaaataagttatcgacgataggcgtgagagccatgcct
cttcccgaaggagtgacacaacttttagagcaaagcactgatctcatccgaacaatggag
acgtacaacttatcagtgaaagagggccgaaacactttagcaatcaatccgaagacgctg
caagcaatccaggatttaaaagaagcgtttaaatctcatttacaaggaaggaagtggaga
aatgccgtagatcagatctggtcttttggtcctcgtcgctacgggcctaatattttactt
aacaggatagaagattataagaggccctcggtttggcagtgtcttgataaagcagcgaat
gacacagctgcgtaccgtgatttcgacaatagcattgtcagtggcttccagttagctact
ctttctgggcccatgtgtgaggagccactgatgggagtctgttttattgtggaaaagtgg
gatatgaaccttcctttttcacagcccagccaagacaattatgtgaatgccaatgtgtcg
atgaagttgcacagccaaggagagcagaatggcggagaagcgaacgctgaagccaggcaa
agtggtgacgaagactgcaaacccattgctccagtcagtgaggcgtctccttccagtgcg
gcacagaaacgtaaaaacgaaacggccggatcggattgctatgggccattctccggtcag
ctcatcgccaccatgaaagatgcatgtcgatatgcattccaggctaagccccagcgactt
atggctgcaatgtatacttgtgaaattatggctactggagaggttcttggtcgagtctat
ggtgtcctttccaagagagaaggccgcattttgcaagaggaaatgaaggagggtactgac
atgttcatcattaaagctgtccttccagtagcagagagctttggctttgctgatgagatc
agaaagaggacgagcggcctggcaagtccacagctggtgttcagccactgggagttgatc
caaagtgatccattttgggttcctaccacggaggaggaatacctgcatttcggcgaaaaa
gcggactctgaaaaccaggctcgcaagtacatgaacgccgtgaggaagagaaaaggattg
tatgttgaagaaaaaattgtggagtacgcggagaaacaacgaacccttggccgaaacaag
tag
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