Polypterus senegalus (gray bichir): 120541334
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Entry
120541334 CDS
T08668
Name
(RefSeq) cadherin-related family member 3-like isoform X1
KO
K16503
cadherin-related family member 3
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120541334
Cell adhesion molecules [BR:
psex04515
]
Cadherins
Cadherin related
120541334
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
120541334
NCBI-ProteinID:
XP_039628789
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Position
12:5052284..5089955
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AA seq
906 aa
AA seq
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MVKKEWTFFFCYALQVSTSCCGKCSVACPGPAVTAEIFPIGRTAVSRSLILILLSISLNS
PFAVTSSSCSPLPVDVFSALTITVDPLIKTIAENCPGGTSVASINVSVPVGATLNGNPVI
VNSSPAYHPFFIASSAASQWSVITASAPILDFEAVPTYRLQILVQDSKGRSASQFITVEL
SDVNEPPFFTGALALQDAEVFLPEDIVNNTLVYKVAAQDPDVTDLQLQFTIVSISPGNTG
FSIDGSGGIFTVMAFDYEGATKSYMVSVRVQDHGGLAVLGNIKVYITNVNDNGPTLNCTF
IGYSAGTKTLVPQTSTSGGTARFKVDEELTIGTLVATCVASDADLMNDLSFRLQPDNPLL
SVSTRAGSVLTAARMDVESDGFVPLQSFAVMVCDGGGRCAAIPATLEVLPINDVPPYCYQ
SFYNFIRAGSIPANTTVASLNCFDGDKPPDALQYTPYGGLLGPGQLFQQVTGSPMTIQVT
RTLDFNDPAVVAAEHIYQIMIVISDSTSPVHNVTATVVVEVTAVNEFTPVFESSLYKFSV
LETSVENYQIGSVRATDADYPLNCVSYTIASGDSQRLQRFWIDPVTGTIELMTSPDAETV
REYNLTVQARDCGPVNVKSTSTTVKIEIVPENDKKPVCIPATYKSVIFDNITVGTPINMF
RLSCKDFDSADEELRYEIVSGNVNNHFGFDPSRGSSSPKMILKSPFSDADMQDFYHLVVF
IIDDNVKVSKPRTGSVLVDISVRKAATPAPPTTSYYHRRGLTLLTPSVNSYEDKAWYVPL
VLTLMALFFVALVAFLCCLVWNSTGLKESCCLKAPKKIKVFREAPRKEKMKTTTEIKKYN
TVFDGEAVDPVTGKRYKYNSRSGARRWKDPIIVREVEEDRLFKDTELSMAASAAEKHSEL
PSVLKK
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaaaaggagtggacattttttttttgttatgctttacaagtcagtacttcctgt
tgtggaaaatgctcagttgcatgtcctggtccagctgttactgctgagatttttccgatt
gggaggactgctgtttcaaggtctcttatcctgattcttttgtccatctctctaaactcc
ccctttgctgtgacatcatcttcctgctctcctcttcctgtagatgtcttcagtgccctg
accataactgtggaccctctaatcaagaccatcgcagagaactgtcctggtgggacatcg
gtggcttccatcaacgtctcagtgcctgttggcgccactctgaatggaaaccctgtcatc
gtcaattcaagccccgcataccacccgttcttcattgcttccagtgctgccagccagtgg
agtgtgatcaccgcctccgctcccattctggattttgaagctgttcccacctacaggttg
cagatcctggtgcaggattccaaggggaggtctgcctcccagttcatcacggtggagctg
agcgatgtgaacgagcctcccttctttaccggggccctggcactacaagatgctgaggtg
ttcctcccagaggacattgtgaacaacactctcgtctataaagtcgcagctcaggaccca
gacgtgactgacctccagctccagttcaccatagtcagcatttccccaggaaacacggga
ttttcgattgatggttccggtgggatcttcacggtgatggcatttgactacgaaggagct
acgaaaagctacatggtttcagtaagagttcaggaccacggaggccttgctgtcctcggg
aatatcaaagtgtacatcaccaacgtcaacgataatggacccaccttaaactgcaccttc
ataggttacagtgctggcactaaaaccctcgtgcctcaaacttcgacctcaggtgggaca
gcccgcttcaaagtggacgaggagttgaccattggcaccctggtggccacctgcgtggcc
agtgacgcggacctcatgaacgacctgtccttccgccttcagccggataaccccctcttg
tcggtcagcacgcgagctggcagtgtgctgacagcggctcggatggatgtggaaagcgat
ggctttgtgccactccagtcctttgccgtcatggtctgcgatggaggcgggagatgtgca
gccatcccggccactcttgaagttctgcccattaatgatgtgccaccatactgctatcag
tccttttacaattttatccgtgcaggctccattcctgctaacaccaccgtggccagtctt
aactgtttcgacggtgacaaacccccagatgctcttcagtacactccatatggaggactt
ctgggaccagggcagctgtttcagcaggtcactggctcaccgatgaccattcaggtcact
cgtactctggactttaatgatcctgcagttgtggctgctgagcacatttaccagatcatg
atagtcatctctgactccaccagccctgttcacaatgtaacagcgacagtcgtagtggag
gtgaccgcagtcaatgagttcactcctgtttttgagtcatcgctttataaattcagtgtc
cttgaaacctcagttgaaaactaccaaattggaagcgtgcgggccacggacgccgattac
cctttgaactgtgtgtcctacacgatcgccagcggagactcgcagcgcctgcagcggttc
tggattgacccggttactgggacgattgagctgatgaccagccccgatgcagaaacggtg
cgggagtacaatttgaccgtgcaagcgagggactgtgggcctgttaacgtcaagagcacc
agcaccacggtgaaaattgaaatcgttccagaaaacgacaaaaagcctgtgtgcatccca
gcgacttacaaatcggtcatttttgacaacatcacggtgggaacgcccatcaacatgttc
agactgagctgtaaggacttcgactcggccgatgaagagctacgctatgaaatcgtctca
ggaaatgtgaacaaccactttggctttgacccgtccaggggctccagttctcctaagatg
attttaaagtcccctttcagtgatgccgacatgcaggacttctaccacttggtggtcttc
atcattgatgacaacgtgaaagtcagtaaaccgaggacaggctccgtcttggttgacatt
agcgtgaggaaagctgcaacacctgcgcccccaacaacctcttactatcaccggagaggc
ctgaccctcttgaccccctctgttaactcctatgaggacaaggcgtggtacgtccccctg
gtcctgaccctgatggccttgttttttgtggcgctggttgcttttttatgctgccttgta
tggaattctacgggtctcaaagagagctgctgcttgaaagctccaaagaagataaaagtg
ttcagagaggctccaaggaaggaaaaaatgaaaaccacgacagaaataaagaaatacaac
acagtgtttgatggtgaagccgtggacccagtgactggaaagagatataaatacaacagc
agatcaggcgcaagaaggtggaaggacccaatcattgtcagggaagtggaagaagacagg
ctgttcaaagacactgagctctctatggcagcttcagctgctgaaaaacactccgaactt
ccatcagttctaaagaaataa
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