Polypterus senegalus (gray bichir): 120541500
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Entry
120541500 CDS
T08668
Name
(RefSeq) integrin alpha-11-like
KO
K06587
integrin alpha 11
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04512
ECM-receptor interaction
psex04810
Regulation of actin cytoskeleton
psex04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120541500
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120541500
09142 Cell motility
04820 Cytoskeleton in muscle cells
120541500
04810 Regulation of actin cytoskeleton
120541500
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120541500
Cell adhesion molecules [BR:
psex04515
]
Integrins
Integrin alpha subunits
120541500
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
VWA_2
FG-GAP_3
Integrin_A_Ig_2
Integrin_A_Ig_3
Motif
Other DBs
NCBI-GeneID:
120541500
NCBI-ProteinID:
XP_039629136
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All DBs
Position
12:complement(108041125..108111601)
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AA seq
1193 aa
AA seq
DB search
MDFFKTIFLLCASGLFPEGTKAFNIDTKQPRIIQGSRESQFGYTVQQHEAGGQQWLLVGA
PYETTGYQRTGDIHRCPLSNKGNNSCSRLNLGRISLTNVSERKDKMRLGMTLTSNPKDNS
FVTCGPLWSHECGSSYYSTGICSRVNASFKFSRTIAPAFQRCETYMDIVIVLDGSNSIYP
WYEVQNFLINILQKFYIGPGQIQVGVVQYGEEVVHEFNLNDYKTVDEVVQAARHIEQRGG
AETRTAFGIEIARSEAFKRGGRRGSKKVMIVITDGESHDSPDLQKVIEDSEKDDITRYAI
AVLGYYNRRGINPEAFLKEIKFIASDPDEKHFFNVTDESALKDIVDALGERIFSLEGTNK
NETSFGLEMSQAGFSSHVVEDGILLGAVGAYDWNGAILKETGHGKVVPPKVSYRHEFPEE
LKNHGAYLGYTVTSVVSARGSRLFVAGAPRFNHTGKVIIFTLRNNGSLTILHSLKGFQIG
SYYGSEIGAVDVDNDGLTDVLLVGAPMYLSQGWERGKVYVYRVTELAQFEIDGALEMEHS
QNTRFGSSISPIPDLNADGYNDVVIGAPLEDEHRGAIYLFHGHKKRILTPYKQRIGAAEL
SPMLMYFGRSVHGKLDLNEDGLVDLAVGSLGAAVILWSRSIVHIHTSIRFEPSKVNMFNK
DCKRNGKEATCMAAIVCFNVTAKAPLTQVQEVALKYSTSIDERKFMPRAILDDINDKLFY
RNITVPPNMDTCEHVYFHVLDTTDYLRPILFTVEFAMLFPDDGPALDDDWPTTLKASLPF
WNGCDGEEHCIPDLVLQSRTDILDGRTYCHSVFQNWGNPCSRQAVSPESDHVIESPKRKI
TVDSVLENRGENAYNTQLDISFSRNLLFTGLTIKGYTDIKIECVSNMNVSLGLICNVSQP
FLRSQAQVAFRLEFEFSRTIFLDHVYINISASSDGEEDVLTMDDNSNIIFYQLKYETDLL
FTRDSSLTHYEIKINHTVEKYDSIGPSFNYTFQIQNLAFFPVDNMQLSIEIPEVTKSGNQ
LLLLEGHSIGQTEGGLCTAPTSVKNNRILSEDLSHYTQLNYSNSGTTTVKCSLSLHPNEE
LTVLVRGILRIDTLKSVRFKSLALVTTARLMLDGSSPFFLRDERLARNVILLITKEEDYR
IPFWIILGSTLGGLLLLALLILALWKLGFFQSTRHKKKEEEEAEPNGKVVEES
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttcaagaccatctttctgctctgtgcctctggtctttttccagaggggacc
aaggcctttaatattgacaccaagcagcctcgcatcatccagggatctcgagaatctcag
tttggctacacagtgcagcagcatgaagccggcggccagcagtggttattggttggggct
ccctacgaaaccacaggataccagcgaactggagatatccacagatgtccactgagtaac
aaaggcaacaacagctgctccagacttaacctggggaggatatcactgaccaatgtatcg
gagcgtaaggacaaaatgcgtctaggaatgaccctcaccagcaaccccaaagacaatagc
tttgtgacctgtggcccactctggtctcacgaatgtggcagctcctactacagcacgggc
atctgctccagagtcaacgccagcttcaagttctccagaacaattgctcctgcatttcag
agatgtgaaacctacatggacattgttattgttctggatggctccaattctatttacccc
tggtacgaagtccaaaatttcctcatcaacatcttgcagaagttttacattggccctgga
cagatacaggtgggcgtggtacagtacggagaagaagttgtccacgagtttaatctcaat
gactacaagacagtggatgaggtggtgcaggcagccagacacattgaacagaggggtgga
gctgaaaccaggacagcattcggcattgagattgccagatctgaagcttttaaacgtggt
ggccgtagaggatccaagaaggtaatgatagtgatcactgatggggagtcacacgatagc
cctgatctccagaaggtcatcgaggacagtgaaaaagatgatatcacccgctacgccatt
gcggtcctcggctactataacagaagaggcatcaatccagaggcatttctaaaggagatt
aagttcatcgctagcgatccggatgagaagcacttcttcaacgtgacagacgaatcagct
ttgaaggacatcgtggatgccctgggagagagaatattcagcctagaaggaactaacaag
aatgagacctcctttggcttagagatgtctcaggccgggttttcgtcacacgttgtggag
gatgggattctgctcggagctgtcggagcatacgactggaatggggccatcctgaaagaa
accggtcatggaaaggttgtccctcccaaagtttcctaccggcatgaatttcctgaagag
ctgaagaatcatggggcttatctaggttacacagtgacgtctgtcgtctcagcgagaggg
agcaggctgtttgtggcaggagccccacgcttcaaccatactggcaaagtgatcatcttc
acactgaggaacaatggaagcctgaccatccttcactctctcaagggtttccagattggc
tcatattatggcagtgagattggagcagtcgatgtggataatgacggattgactgacgtg
ctgctcgtgggtgctcccatgtacctaagtcagggctgggagagagggaaagtgtacgtc
tacagagtgaccgagcttgctcagtttgaaatagatggtgctctggaaatggaacactct
cagaacacgaggtttgggtcatccatatctccaatccctgacctcaatgctgacggctac
aatgatgtagtgattggggcaccgctggaagatgagcaccggggagctatttatctattc
catgggcacaaaaagcggatccttactccctataagcagaggataggtgctgctgagctc
tcacccatgctcatgtattttggacgaagtgtccatgggaagctggaccttaatgaagat
gggttggtggatctggctgtgggttccttgggtgctgcagttattctttggtctcgcagc
attgtccacatacataccagcatccgctttgaaccatccaaggtgaacatgttcaacaaa
gactgcaagcggaatggcaaagaagccacctgtatggcagcaatagtttgtttcaatgtg
acagccaaagctccgctcactcaggtgcaggaagtggctctgaaatatagtacctccata
gatgagcgcaaattcatgccaagagcaatcctcgatgacattaatgataagcttttctac
cggaacatcactgtgccgcccaacatggatacgtgtgagcatgtctacttccatgtattg
gacacaacagactacctgcggccgattttatttacagtggagtttgcaatgctgtttcct
gatgatggaccagcgctggatgatgactggcccacaacgctgaaagcatcgcttccgttc
tggaatgggtgtgatggagaggagcactgcatccctgacctggtcctgcagagcagaacg
gatatcctggatggaaggacatactgccattctgtcttccaaaactggggaaacccctgc
agtcgtcaagctgtgtcacctgagtcagatcacgtaattgagagtccaaaacgaaagata
actgtggatagcgtactggagaacagaggagagaatgcgtacaacacccagctggacatc
tccttctccaggaacctgctcttcacaggcctaacaattaagggatacacagatatcaaa
attgaatgtgtatctaacatgaatgtgagcctgggtttaatctgcaatgtcagccaaccc
ttcctgaggtcccaagcacaggttgcattccgactggaatttgagttcagcagaaccatc
tttctggaccatgtatacatcaatatctcagccagcagtgatggtgaagaagatgtgttg
accatggatgacaattctaacattatcttttaccaacttaagtatgagacagatctcctg
ttcacaagggattcaagccttacccactatgagattaaaattaaccacacggtggagaag
tacgacagcattggcccctctttcaactacactttccagatccagaatcttgcgtttttc
cccgtggacaacatgcagctgagcattgaaattccagaagtaacaaaaagtggaaaccag
ttacttctcctggagggacactccattgggcagacagaaggtggactttgcacagcccct
accagtgtgaagaacaaccgtattttgtcagaggacctgtcgcactacacacaactgaat
tacagcaactctggcacaaccacggtgaaatgttcactgagtcttcatcccaatgaggaa
ttaaccgttctcgtacgaggaatcttaaggatagatactctgaaatcggtccgattcaaa
tcactggcacttgtcacaacagcaagactcatgctggatggatccagtcctttcttccta
agagatgagcgtctcgcacgcaatgtcattctcctaatcacaaaagaggaagactataga
attcctttctggatcatattggggagtacactgggtggtctgctactgctggctctgctg
attctcgctttgtggaagcttggctttttccaaagtactcgtcacaagaaaaaagaagag
gaggaagcagagccaaatgggaaagtagtggaggaaagctaa
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integrated database retrieval system