Polypterus senegalus (gray bichir): 120541520 Help Entry 120541520         CDS       T08668                                  Symbol spg11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism psex  Polypterus senegalus (gray bichir) Brite KEGG Orthology (KO) [BR:psex00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:psex03400]     120541520 (spg11) DNA repair and recombination proteins [BR:psex03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      120541520 (spg11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C KNOX2 Motif Other DBs NCBI-GeneID:  120541520 NCBI-ProteinID:  XP_039629175 LinkDB All DBs Position 12:109136857..109229852 Genome browser AA seq 2435 aa AA seqDB search MGSLEVLLSRWPNYKDVVKAKVCPRGSGALGCLTADGTLRIAMLGTGTCEHLLDGVFKDF VWEDMISSPADGSKLRLLCVSVHNDLAVYKLNAHTFSLISQCSEDDLRTQVVLKDLCLPS SLSLQLLSFANKHAFVLLNSCILVQISFSTPTHLEILGFYNLNLAPEASAEIVDSQICKG ILLLLDKAGHIYLYSTADGKHLANVNLVLNRINPEEDECKLFSFMLLRVSHNLSTVAVIT SCGSAVSVNLNKYFREHPQDLLCRHVQEQLPLKRDVALDEDSLESAAYSAIALGLPFKTE RSWEARLSTLCSKVAPAPVCTTKVFTPWYHHLPYVHLRETINLTRTSSFASFLKTFICVQ SHGGQKPTGEFSDMANSQSLSVMHFKDYKEHTAIAVSASEFSVFVLFISNDKSQVTVALW DLLANEVAYHPLCDSCVTAESSGEEQLCIILKESGLSMILFGLTQEDLLNRLIIYGSAGT VDSLCHLNGWGRCSIPIPALEAGLKNRQLDTVDFFLKSKKNILSTSITYSVPESSLNSSY VQLENIKSLTPALNLLSSAIKDNDLEAQSKQFSEQLLNITLSFLNKQVREIIERTQELDD HMQQCIDILSSYISELRTFMKKFPRFSSSDPDVSDFGDSENLLTKCNQRWKSLPLHEFIQ DAIMSNQIPLAQAYLRQHHDPAHCLDKLLKIGLNLVFQHLQQRKVTEAGRLLRNMGYDVN KKLHTVCFYTDDKDLRDFLAEHLQKQNHFSEKESSLLEFIKIVERQLLPSPRTKSTQVVC GTGSLQMEQIDSKHEAVLEKMLRDETLIQTKCSSILLDWAKWWDNNIQEVILLSRQIEED KCPAGDSRGLGMKTHITEVLWGYLTLLHIWQNIGIWLDFFGVPESTVSQKWPALTPVVIN SFTHCCSYMKNKVLDKLAKNKIFVTSDLDDFEQLLGRLCQAGGVMQDSLPVPNYLSSNGM DFHSHFITFCLENGLRYLLYVYLEYYRLNLSNCPILADEVLYAAHPWFELLVRFQEITKN PKDPYVIFQSSLTNSHILIPGSQASVSSMLLEGHTLLALATLMFAPGGFDEVVGQKDGEE SSWKVDPQLLKMALAPYPKLKSALFPQNSSRGIPAPDISIYNLIQALFPFNPSRHFGWQT ANTLATVGMYACQNLLESSGEMPHFASIDLVNKYAVAERLDYLHYLHHGRPSFAFGTFLV QQLSKTNSAIQAIKQAFCEAYGLGLLNFDQPVIAAACVCFCELLGVDSLKLRVDLQVGNL IFKHWTNSNEVAPQNSLRDSLAEKLFKLVDADKQSAEDLLTLLEEAIQDCIERSQFSRTS HQSSLEWALAVQFCRVHELALSTVYLQHCAWDNEFLQFLIFIQLHNYDSEQVKSLLKYFS PVLQEHLSLAFENLQLVPLEEEEEKKCLQDTDALKMSLPRRKAVPHELFHVLLLSQDKPR PWRYLLCEAISHNCPVLSVLAACEQGADVLQCLCVWILTSVDEHVMQEATCHVKESMDQH AWDLHDLSVIFKVLLKNLRVKPLLRGFKLFQKESPMVFMLEMYEQCSEYKDYTAAKCKLF EFQKCLINLKSQNSEISFPIPVQWLESHALLLPFLILQQCQTQYELRKVLQLLADTDSVW RCHGPDFKKLSILSQILQDTTILIDLSLPKNYSIEALQKECQKILEQLLEARLFALARQV ADLADLPIDRLVINQLLQELQTLKERKQWERRETRISFWKKCNSQFQSDSVRIVSVTEFF MAQAEAIPQVKGSVSEVQLTNIQEKRLLLTLAGHWLSQQDPTPIGQLEAIEKKIWECCIY QQTLLNKFEPANIFFHHVAVAGDSSYDTLIKEYSFSKLTVLNCPKYLHVEGLPVMDSSEI KLDTTEKQALAHLIGQLLDEGSIHEASRICRYFDFYNQDVILVLYCRALASGEVDTTAMH PGVQIILTAGCTAGLEKGTRRSRMSSTTSLTSSSSFVVVSQPEDQVISDLQILTDECHHG NNYCRQVLSLYELSKELNCSYSEISAQEPKTVLRKVLSSAQPDRFKKAQAFITIQGMGVQ SVAELVACDVLQALLASNQDLDSAASHKPIYNPEDGREAFLQLARLSQDPNIVGSMLLDK ISCVPHGELACTVELLILAHDCYTMTCNMEGIVRVLQAARHLSHNHLAPSEQYSLMVRLL TGIGRYNDMTYIFDLLYQNHRFEILLRKKVPSNTTLKTALLDYIKRCHPGDSEKHNMVAL CFSMCREIGENHEGAARTQLKLIESQPWAVTPELKKSLMKVLTLLKDAAESYSKDSCVRQ ALRCIKLAKLVTLQIHFLNINQDRRLINLARQDLMDAMISLPHFYQALVVAEAYDFVPDW AEIVFQQVVVRGDFSYLEEFKQQRPLQASLLEEISKKFKQPAESTTGQNLIRLLKSCDDV YMRYKVAYEHKLFGVANALLQDPKTSCYLNDKLAS NT seq 7308 nt NT seq  +upstreamnt  +downstreamnt atgggcagtttggaagtgttactcagtcgttggccaaattacaaagacgttgtaaaggca aaagtatgtccaagaggctccggtgctttgggctgtttgacagccgatgggaccctgcgt atcgcaatgctgggaactggtacttgtgagcatcttttagacggagtcttcaaagacttt gtttgggaagatatgatctcctcccctgctgatggaagcaagttgcgactcttgtgtgtt tctgtccataatgaccttgctgtttataagctgaatgcacacacattttctttaatatcc caatgttctgaagatgaccttcggacccaggttgtgcttaaagatctctgcctaccttca tctctttccttgcaacttttgtcctttgccaataaacatgcatttgtgttgctgaatagc tgcatccttgtgcaaatttcattttctacaccaactcatctagaaatcctgggattttat aatctcaatcttgctcctgaggcatcagcagaaatagtagacagtcaaatctgcaaaggg attcttcttcttctggacaaggcaggacatatatacctatatagtactgctgatgggaaa catcttgccaatgtcaacttggtgttaaatcgaattaatcccgaagaagatgaatgcaag ttattttcattcatgctgctcagagtgtcgcacaatttaagcacagttgctgtaattact tcctgtggctctgctgtctctgttaacttaaacaaatacttcagagagcatccgcaggat ttgctgtgtaggcatgtacaagagcagctgcctctgaagagagatgtagcccttgatgag gacagcttagagagtgctgcctatagtgcgattgcacttgggcttccattcaaaacagaa aggtcctgggaagcaagattgtctactttgtgcagtaaggtggctcctgctccagtttgt accactaaagtattcacgccttggtatcatcatcttccatatgttcatctaagagaaact atcaatctgactcggacttcctcatttgcctccttcctgaagacttttatctgtgtccaa agccatggtgggcagaagccaactggagaatttagtgatatggccaatagtcaaagcctg tctgtcatgcattttaaggactataaagaacatacagccattgcagtttctgcatcagaa ttttctgtttttgtacttttcatttccaatgataaatctcaagtaactgtggcactttgg gacctgctagccaatgaagttgcatatcatcctctttgtgattcctgtgtgacagctgag tctagtggggaggagcagctttgtattattctaaaagagtcaggattgtccatgatcctt tttggcttaacacaagaggatttgctgaacaggctaatcatctatggaagtgctggaacc gttgattcactgtgccatctgaatggctggggaaggtgttccattcccatccctgcctta gaggctggtctgaagaatcgtcagctggacacagttgacttctttctgaaaagtaaaaag aacatcctcagcacgtccattacttatagtgtgccggagtcgtctttgaactcttcttat gtgcaactggaaaatattaagagtctaacaccagctctcaatttgctgtcatctgccatc aaagacaatgatttggaggctcagagtaaacaattctctgaacaactgctcaacattact ctctcatttcttaataagcaagttcgtgagatcattgagagaactcaagaactggatgat cacatgcagcagtgcattgacattttaagcagctacatttctgaacttcgcactttcatg aagaagtttcctaggttttcaagtagtgacccagatgtctctgactttggtgacagtgaa aaccttctcaccaaatgtaaccagaggtggaaatctcttcctttacatgaatttattcaa gatgccatcatgagtaaccagatcccattggctcaggcttatttgagacaacatcatgac cctgctcactgtcttgataagcttctgaagataggccttaacttggtctttcagcatctt caacagaggaaggtgacagaagcaggaaggctcttgagaaatatggggtatgatgtaaat aagaagttacatactgtttgcttctatacagatgacaaagatctgcgtgactttttggct gagcatttacagaagcagaatcacttttctgaaaaggaaagcagcttgctggagttcatc aaaatagtggagaggcaacttctgccatcccctagaacaaaatctacacaggttgtatgt ggcactgggtctttgcagatggaacaaattgattcaaaacatgaggcagttttagaaaag atgttaagagatgaaactcttatccaaaccaagtgttcgagtatactattggattgggcc aaatggtgggacaacaacattcaggaagttatcctactatcaagacagattgaggaagat aagtgccctgcaggagatagccgtggtttaggtatgaaaacacacatcacagaagttctc tggggatacctgacgttgctgcatatttggcagaatattggaatatggttggattttttt ggtgttccagagagcacagtttcccagaaatggccagcacttacaccagtggttatcaat agtttcacgcattgctgcagctacatgaagaacaaagtgcttgacaagctggcaaagaat aaaatatttgtgacctcagacctggatgattttgagcagttgttgggaagactgtgtcag gctggaggggtgatgcaggattcattaccagtccctaattatctctcgtccaatggaatg gactttcactcccacttcattaccttctgtttagagaatggactgcgctacttgctatat gtttatctggaatattacaggttaaatctgagcaactgccctatcctggctgatgaagtt ttatatgcggctcacccttggtttgaattgttagtcaggtttcaggagatcacaaagaat ccaaaagatccctatgtcatattccagtctagcctgactaattcccatatactgatccct ggcagccaagctagtgtaagcagtatgctgttagaaggtcacaccttgctggctttggca acattaatgtttgcccctggagggtttgatgaggttgttgggcaaaaagatggagaggaa tcatcatggaaggtggacccgcaacttttaaaaatggctctggccccatacccaaaactt aaatctgcattgttccctcagaactcatctcgtggcattccagccccagacatctctatc tacaatcttattcaggctttgtttccatttaatccttcaaggcactttggatggcagact gccaacacactggccactgttggtatgtatgcatgccagaatttattagaatcttctgga gagatgccacactttgctagcattgatcttgtaaacaagtatgcggttgctgaacgcctt gattatctgcattacctgcaccatggacgcccgtcttttgcttttgggaccttcctggta cagcagctttcaaagaccaactctgcaattcaggcaattaagcaggctttctgtgaggct tacggccttggacttctaaattttgaccagcctgttattgctgcagcatgtgtttgtttc tgtgagctgctaggagttgacagccttaaacttagagtggatttacaagttggcaacctg attttcaaacactggactaacagcaacgaagttgctccacaaaactccctacgagacagc cttgccgaaaaactctttaaattagtggatgcagataaacaaagtgctgaagatttactg actttgcttgaggaggccatacaggactgcatcgagaggagtcaattcagcagaacatcc caccaatccagtctggaatgggccctggctgtacaattttgcagagttcatgagctggca ctcagcactgtttatctacaacactgtgcctgggacaatgaatttctacagttcctcatc ttcatccagcttcacaattatgattctgagcaggtaaaaagtttgttgaagtacttcagc cctgttcttcaggagcacctgtcattggcctttgaaaatctgcagttggtgcctttggag gaggaggaggagaagaaatgtctacaggacactgatgctttgaagatgtccttgccacgt aggaaggcagtcccacatgagctcttccatgttttgcttcttagtcaggacaagcctaga ccatggaggtaccttctttgtgaggcaatcagccacaactgcccagtcctcagtgttctg gctgcttgtgaacagggtgcagacgttttacagtgtctatgtgtctggattctaacatct gtggatgaacatgtcatgcaagaggccacttgtcatgtaaaggagagtatggatcagcat gcctgggatctacatgacctttcagttatcttcaaagtgctccttaaaaaccttcgagtc aagccacttttaagaggttttaagctttttcagaaggaatcgccaatggttttcatgttg gaaatgtacgagcagtgtagtgaatacaaggactacactgctgccaaatgcaagcttttt gagttccagaagtgcttgataaatctcaaatcacagaactctgaaatctcctttccaata cccgtacagtggcttgaatctcatgccttgctgctgcccttcctgattttacagcagtgt cagactcagtatgaattgaggaaggtgcttcagctgctggccgacacagactctgtctgg cggtgccacggtcctgatttcaaaaaactaagcatcctcagtcaaatcttacaggacaca acaattctcattgacctttctctaccaaagaattactcaatagaggccctgcagaaggag tgtcagaagattctggaacagttgctggaggccaggttgtttgctttagctcgacaagta gcagatctggctgacttgcccattgacagattagtaattaaccagctcttacaagaactg caaactttgaaggaacgcaagcagtgggagagaagagaaactcgaattagcttctggaag aagtgcaatagtcaatttcaaagtgatagtgtgcggatcgtcagtgtgacagagtttttc atggctcaggcagaagccataccacaagtcaagggttcagtatctgaggtgcagctaacc aacattcaggagaagcggcttctcctgacgttagcaggacactggctatcccagcaggac cctactcctattggacagcttgaagctattgagaagaagatatgggagtgttgtatttac cagcaaaccttactaaacaaatttgaaccagcgaatatatttttccaccatgttgcggtg gctggtgactcctcttatgacactttaatcaaggaatactctttttcaaagctaacagtg ttaaactgcccaaaatatctccatgtggagggtctcccagtcatggatagttctgaaatt aagctggataccacagagaaacaagcactagcccaccttattggacaattacttgatgaa ggttccatccatgaagccagtcgcatctgcagatactttgacttttacaaccaggatgtg atactagtattgtactgcagggctttagcatcgggggaagtggataccacagccatgcac ccaggggtgcagatcatcctcactgctgggtgtacagcaggtttggaaaaaggaaccaga aggtcacgaatgtcaagcaccacaagcctcacaagcagctcctcatttgtggttgtgtca cagccagaggatcaggttataagtgacttgcagattctaactgatgagtgtcaccatgga aacaactactgcagacaggtgcttagcctgtatgagctgtcgaaggaattgaactgctca tacagtgagatctctgcacaggagcctaagacggttctacgcaaagttctgtcatctgca cagcctgaccgttttaagaaagcacaggcttttatcaccatccagggcatgggagtgcag agtgtagccgagcttgtggcctgtgacgtcttgcaggcattacttgcttcaaatcaggat ctggactcggccgccagtcacaagcccatatacaacccagaggacggaagggaagccttc ctgcagctggccagactcagccaggatccaaacatcgtgggctctatgctgctggataaa atctcctgtgtgcctcatggagagctggcctgcacggtagagctgctcatccttgcacac gactgctacacgatgacctgcaacatggaaggaatcgtccgtgtcttgcaggcagcacgt cacctcagccacaaccacttggcacctagtgagcagtacagtctcatggttcgtctgctg actggaattgggagatacaatgacatgacctacatttttgaccttttgtaccagaaccat cgctttgaaattttgcttaggaagaaagtgccatcaaataccactctgaagacggctctc cttgattacatcaaacgctgtcatccaggtgacagtgagaagcacaacatggtagccctc tgctttagcatgtgccgtgagattggggaaaaccacgaaggagctgcccgtacccagctg aaactgattgagtcccagccttgggcagttacaccagaactgaagaagtcactaatgaaa gtcctgactctcttaaaggatgcagctgagagttattccaaggactcttgtgtgcgccag gctctaaggtgcataaaactggccaaactggtcaccctgcagatccactttctcaacatt aaccaggacagacgtctcattaacctggctcgacaggaccttatggatgccatgatctcc ctgccacatttctaccaggcacttgttgttgctgaagcttacgattttgtccctgactgg gcagaaatcgtgttccagcaagttgtcgtgagaggagacttctcttacctggaggaattc aagcaacagagaccactacaagctagcctgctagaggaaatttcaaaaaaattcaagcag ccggctgagtcaacgactggccagaacctcatacgactactcaagtcctgcgatgatgtc tatatgcgctacaaagtggcctacgaacacaagctgtttggtgtggcgaatgctcttctc caggatcccaaaaccagctgttacctaaacgacaagctggccagttag

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