Polypterus senegalus (gray bichir): 120541553
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Entry
120541553 CDS
T08668
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120541553 (chd2)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
120541553 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
CHDCT2
Motif
Other DBs
NCBI-GeneID:
120541553
NCBI-ProteinID:
XP_039629232
LinkDB
All DBs
Position
12:complement(118394087..118591683)
Genome browser
AA seq
1811 aa
AA seq
DB search
MMKNTDEKQKDDGSTQSNGSSNSASEESNHSAYDSGSQSESEQGSEQAPEPGSDHCSDTN
SSSESESRSESGSESAESKSQQTPSQAKDKPISKKERIADVKKMWEEHPDVYGVRRSNRS
RHEPARLNLGMEGSSDSENESPKRRGTRQKKRGITWKDDGSNNEEEEDESSSEQEETKVK
SQRPTAKRKQVRKPAKKQQRPQNKKRKRHESSDEDDEDEDDDDDDTPKRQTRRRAAKNVS
YKEDEDDFETDSDDLIEMTGDGMEDQQDDSETIEKVLDNRIGKKGATGATTTVYAIEANG
DPNADFDLQKEEGEVHYLVKWKGWSYIHCTWESIDSLTQQKVKGLKKLENFKKKDEEIKQ
WLSKASPEDIEYYNCQQELTVDLNKQYQIVERVIAMKTGKSSQVHTDFPSHKTSSSNEPE
YLCKWMGLPYAECSWEDGILIQKKFPLCIEKFSNRNNCKTIPSKDCKVLKQRPRFVTLKK
QPSYIGGENLELRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTISFLSYLFHQHQL
YGPFLLVVPLSTLTSWQREFETWAPDTNVVVYLGDIGSRNTIRDYEWVHPQTKRLKFNAL
LTTYEILLKDKAVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFRSNHRLLITGTPLQNS
LKELWSLLHFLMPEKFDSWEDFESDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAK
VEQILRVDMSAQQKQYYKWILTRNYKALSKGARGSTSGFLNIVMELKKCCNHCYLVKMLE
ENENEKPEEHLQKLIRSSGKLVLLDKLLTRLRERGNRVLIFSQMVRMLDIIADYLTIKRY
PFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQ
NDLQAQARAHRIGQKKQVNIYRLVTKGTVEEDIIERAKKKMVLDHLVIQRMDTTGRTVLD
NNSGNSNSNPFNKEELSAILKFGAEDLFKEPEGEESEPQEMDIDEILRLAETRESEQSVS
ATDELLSQFKVANFSTMEESSELEERTAKDWDDIIPEDQRKKVEEEEKQKEMEDIYMLPR
SRSSTKKTQANDSDSDVGSKLKPQRSSGSESETDDTDDDKRPKRRGRPRARKDNVEGFTD
TEIRRFIKAFKKFGAPLERLEAIARDAELVDKSVADLKRLGELIHNTCAAAVLEHEEHLK
ENPSEAKGPGKRRGITIKISGVQVNAKSIIQHEEEFASLHKAIPADPEERKNFHLNCHVK
VSHFDVEWDVEDDSNLLLGIYEHGYSNWDLIKADPDLKLTNKILPDDPSKKPQAKHLQGR
ADYLLKLLKRQLENKDSSKLTEETKVKKRKPRIKKENKLPKDDHGNEISSPRHSDNPSEE
GEVKEEGVERSPPRKKTKKKDNKENKEKQILKKEKEVDKERKKTKPKKEKAKSGAKGKKP
QGPVHITAGSEPVPIGEDDDELDQETFSICKERMRPVKKALKQLDKPDEGLSVQEQLQHT
RTCLLKIGDRITECLKMYSDSEQVKLWRRNLWIFVSKFTEFDARKLHKLYKMAQKKRSQE
EEKEPKKEDFSGCKKPFRPEPSGSSRDSAGSQTPQKPQLPLSRPSQQQQQQSNPHYRDNY
GQTNKRHFDRGDWPRERKYYPGNSNPSWQNERHHQYDQHRYKDHHYSERRIHNDPHRVNF
RTNTSPRKRPYDQYDNDRDHRGHRDYYDRHQDPKRRRPDDFRSQNYHQGSSHQQDYRRPP
DHRVQMGYHSQGAPEHYRPFHPDKPIPPATPALIDPRSPQSQKSPHDSRSPLDRPVDQKN
TPDFSWNVRKT
NT seq
5436 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaatacggatgaaaaacaaaaggacgatggctccacacaaagtaatgggtcc
agcaactcagcttctgaagagtcaaaccactctgcttatgattcaggaagtcaatcggag
agtgaacaaggcagtgagcaggccccggagccaggcagtgatcattgctcagataccaac
agcagctcagaatctgaaagtcgatctgagtcaggaagcgagtcagctgagtcaaaatcc
cagcaaacaccttcacaggctaaggataagccaatcagcaaaaaggaaagaatagcagat
gttaagaagatgtgggaggaacatccagatgtttatggggtcaggagatcaaatcgaagc
agacacgaacctgctcgtttaaaccttggaatggaggggagtagtgattctgaaaatgaa
agtcctaaaagaaggggtactcgacaaaagaagagaggaatcacatggaaagatgatggc
tctaataatgaagaagaggaggatgagtccagcagtgaacaagaggaaacaaaagttaaa
tctcagagacctactgcgaaaagaaaacaagtgagaaaacctgctaaaaagcagcagcgg
cctcagaacaagaaacggaaaagacacgagtcttcagatgaagatgatgaagatgaagat
gatgatgatgatgacacccccaagagacaaacacgtcgacgtgcagccaaaaatgtcagt
tacaaagaagatgaagatgactttgaaactgactcagatgacttgattgaaatgacaggt
gatggcatggaagaccagcaggatgacagtgaaacaatagaaaaggttcttgataacaga
attggaaaaaagggggctacaggcgcaactactacagtttatgctatagaagctaatgga
gatcccaatgctgattttgatctacagaaggaagaaggggaagttcactacctcgtaaaa
tggaaaggctggtcttacattcattgtacttgggaaagcatagattctctgactcaacag
aaagtaaagggtctgaaaaagctagagaactttaagaaaaaagatgaagaaataaagcaa
tggctttcaaaagcatctcctgaagatattgagtactacaattgtcaacaagagttgaca
gttgatttaaataagcagtaccagattgttgaaagagttatagcaatgaagacaggaaaa
tcatcacaggtacacactgacttcccctcacacaaaacctcctcttctaatgaaccagag
tatctctgcaaatggatggggcttccttatgccgaatgcagttgggaagatggaatactg
attcagaaaaaatttccactctgtattgaaaaattcagcaataggaataactgtaaaaca
atcccctctaaagactgtaaagtgctaaagcagaggcctcggtttgtcacactgaaaaag
caaccatcatatattggaggagaaaacctagagcttcgtgattaccaattagatgggctt
aactggcttgcccattcctggtgcaggtgtaatagcgtgatcttggctgatgaaatgggc
cttggtaaaaccattcagaccatttcatttttatcgtacctgttccatcagcaccagttg
tatggcccctttctattggtagtaccactctctaccttgacttcctggcagagagagttt
gaaacgtgggctccagatacgaatgtagtagtgtaccttggggacatagggagcagaaat
acgattcgagattatgagtgggtccatcctcaaacgaaaaggttgaaattcaatgcacta
ctaacaacctatgaaatcctactaaaagataaggcagtgttgggtagcataaactgggca
ttcctgggtgtagatgaagctcacaggctgaagaatgatgattcactgctgtataagacc
ctaattgatttcaggtcaaatcaccgcctgcttataacggggacacctcttcagaattcc
ctaaaggaattgtggtcacttcttcacttcctcatgccagaaaaatttgattcatgggag
gattttgaaagtgatcatggcaagggcagagaaaatggataccaaagtttgcacaaagtc
cttgagcctttcctacttcgacgtgtcaaaaaggatgtagagaagtcattgcctgctaaa
gtggagcaaatcttaagggtggatatgtcagcccaacaaaaacagtattataagtggatt
ttaacaaggaattacaaggcactttctaaaggggcacgaggaagcacttctggctttttg
aatatagtcatggaactaaaaaaatgttgtaatcattgttatttggttaaaatgctggaa
gaaaatgaaaatgaaaaaccagaggaacatttgcagaaactcatccgaagcagtgggaag
ctggtacttctggataaacttttgacaagacttcgtgagagaggcaacagagttcttatt
ttttcccagatggtgcgaatgctggatattatagctgattacctaactatcaagcgatat
ccttttcagcgcttggatggctcaataaaaggagaaatacgaaagcaagccctggatcat
tttaatgcagaaggttctgaggatttctgcttcctgctttctacacgggccggaggtttg
ggaatcaacttggcttctgctgacacagtagttatatttgactctgactggaatccccaa
aatgacttacaagctcaagccagagctcacaggattggtcagaaaaaacaggtcaatata
taccgattggttacaaagggaacagtagaagaagatattattgaacgagccaagaaaaag
atggttttagatcaccttgttatccaaagaatggacacaactggtcgcactgttctggat
aacaactcaggaaattcaaattcaaatccatttaacaaggaggaattgtcagcaatttta
aagtttggtgcagaagacctattcaaggaaccagaaggggaagaatcagaaccgcaggaa
atggatattgatgaaattctacgtctggcagaaacgagagagagtgaacagtcagttagt
gccactgatgaactgttgtctcagtttaaggttgcaaatttctctaccatggaagagagc
agtgaactggaggagaggactgcaaaggattgggatgacataataccagaagaccagagg
aaaaaggtagaggaagaagaaaagcagaaagaaatggaagatatctacatgctgccaaga
agcagaagttcgactaaaaagacccaagcaaacgacagtgactcagatgttggttcaaag
ctaaaaccccaaaggtcttcaggttcagagagtgaaacagatgacactgatgatgacaag
aggcctaaacgcagaggaaggccccgtgcacggaaggacaatgtagagggttttacagac
acagaaatccgaaggtttatcaaagctttcaaaaagtttggtgctccacttgagaggttg
gaagcaattgctcgagatgcagagctggttgataaatcagtggcagatctgaaacgtttg
ggagagttgattcataacacttgtgcagcagctgtgttagaacatgaggaacatttaaaa
gaaaacccaagtgaagctaaaggaccaggaaaacgaagaggtataacaatcaagatttct
ggtgttcaggtgaatgccaagtccatcattcaacatgaggaggaatttgcatccctgcat
aaagctatacctgcagatccagaagaaagaaaaaatttccatttgaactgccatgtaaag
gtttcccactttgatgttgaatgggatgtagaagatgacagcaacttactgttaggaata
tatgaacatggctacagcaactgggatttgatcaaagcagatccagaccttaagttaacc
aacaagattctacctgatgacccatctaagaagccccaagcaaaacatctgcaaggacgg
gcagattatctcctgaagctcctaaaacggcaacttgagaacaaagactcaagtaaactt
acagaagaaacaaaagtaaaaaagcgcaaaccacggattaaaaaagaaaacaaacttccc
aaagatgatcatggaaatgaaatttcttctcctcgccactcagacaatccatctgaggag
ggagaggtaaaggaagaaggtgttgaaaggagccctcccagaaaaaaaacaaaaaagaaa
gataataaagaaaataaagaaaagcaaatacttaaaaaggagaaggaagtggataaagaa
agaaagaaaacaaaaccgaaaaaagaaaaggccaaatctggagccaaagggaagaagcct
caaggccctgtgcatatcacagctggaagtgaacctgttcctattggagaagatgatgat
gaacttgaccaagaaactttcagtatttgtaaggagcgaatgcgaccagtaaagaaggct
ttaaagcaactggacaaacctgatgaaggtctatcagttcaagagcagctgcaacacact
cgcacctgtctgctaaaaattggggaccgcatcacagagtgccttaaaatgtatagtgac
tctgagcaagtcaaactgtggaggagaaacctatggatatttgtctccaagtttactgaa
tttgatgctagaaaactgcataagctttacaaaatggcacagaagaaacgatcacaagag
gaagagaaagagccaaagaaagaggatttttcaggatgtaaaaagccattccgacctgag
ccatctggttccagtcgagattctgcaggatctcagactcctcagaaaccacagttgcct
ctgtcacgcccttcccagcagcagcagcaacaatcaaatccacattatcgggataactat
ggacagactaacaagaggcattttgatcgtggtgattggccaagagagcgtaaatattat
ccaggaaatagtaatccatcttggcaaaatgaacggcatcatcagtatgaccagcacagg
tacaaagatcatcattacagtgaacgacgaattcacaatgacccacacagggttaacttt
cggacaaatacttctcctcgcaagcgaccttatgatcagtatgataatgacagagaccac
cggggacacagggattactatgacagacatcaagatccaaagcgacgacgtccagatgat
ttcagatctcaaaactaccaccaaggtagtagtcatcagcaggactataggagaccacct
gaccacagagtccagatgggatatcacagtcagggtgcacctgaacactaccgacccttc
caccctgacaaacctataccacctgccactcctgcactgatagatcctcgatctccccaa
tctcagaaatcacctcatgattccaggtcccctctggaccgacctgtagatcagaagaac
actcctgacttcagttggaatgtcagaaaaacttaa
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integrated database retrieval system
