Polypterus senegalus (gray bichir): 120541678
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Entry
120541678 CDS
T08668
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4 isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120541678 (igdcc4)
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
DCC/UNC5 family
120541678 (igdcc4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Interfer-bind
fn3_2
Ig_ILCR1
Adeno_E3_CR2
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
120541678
NCBI-ProteinID:
XP_039629479
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All DBs
Position
12:135427740..135459916
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AA seq
1174 aa
AA seq
DB search
MALDELVALCTLSLLLSVADEVCSLEVSCGAGPVSVLLDMTQELVLDCHLAALVQPVNIS
WLKDGLPVVSHDLLRLLPNGSLHITARPQNDSDGLPTPEGSYTCISTNSFGSIISRTVTV
QLSTLSHFMLHPVPQSVPQQGLARFECHVDGLPPPLITWEKDQSPVPSQPRFITLPNGVL
QIVNVQQEDTGTYRCMAASASRIQYSQDARLTVTSGPQIGPVDVEIIAPPKNITVIAGRT
AVMECMAHADTMPYVSWIRQDGKPITTDAVVLSTNLLISNTQPHHSGVYVCRANKPKTRH
FAKAAAELRVLGPPLLSQQPETISRTRASTARFMCKAFGDPMPFIIWMKNGNPILSNGRV
KIQSSGSLVINQIGVEDAGYYQCIAKNSLGTACSTAKLTVVVREGLPSAPKQVSIVSMTS
TTALVTWERPELNSEQIIGFSVHYQKTLGTENIEYQFAVSNDTTEFQVKDLEPNTNYSFY
VVAYSPLGASQMSSSATVQMLEDVPSAPPHLSLLSTSPTEIHVMWLPLSLDLSQGKVTKH
RIDYCAMEEDHMYSIEVAGNETQVTLHELKPNQMYKVRIAAGTSIGFGEPSEWMRHRTPA
WEDGATGLLFAPSELKVKAKIDSLHVMWQPPPNHSQVSGYKLYYREVSLEEGKATAVRLR
KKMKHYEITGLAPDHLYEVKVLAFSKHKDGYAAVWKGRTQKAPVQMEEAPQQKAFPQPPT
GVRATANSSTSIWLQWEKPAFSTVKIVNYTVRSSPLGITNASLVTYCVSSGESFLLTGLR
PFTRYELAVQSNAPGAAGPYSNVVLQSTLPDKPSTSPMGLHMSPLSPSSVLMRWEPPEEP
NGIVQEYLILLSTNSSLPDSMWTSVVRDGNTFSAEIQGLDSGSMYYFKIAARTLAGIGPY
SHVLGILMPSLKRSMPDVLDVHSVTGIIVGVCLGLLCILLCMCVSFCQTKPRSVSQSLSY
RKGRSGTVVQQERCDGHELETLMLARPEDMSLTLTEVTEEHSLMEASLENHSLHSELKPA
WNGSVSRNWTSHITSCSDLDWRECTSVKNGCLTIPRGLTEDRQAATHSAAIRTHEDKPAA
PHQVEASVIVHSEHLNRTVKSETDRKADFQEVPSSVFLHTFSEETATCPHSLKNGFRNNE
VLERLLQALDSDSTVARRAAEPSGAFDSTSVCDN
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atggcactggacgagcttgttgcgctctgcacattgtcattgctgctgtccgttgcagat
gaagtctgttccctagaagtgagctgtggtgctggtccagtttctgtgctcttggatatg
actcaagagctggtgctggactgccacctggcagctctggtccagcctgttaacatctcc
tggctgaaggatgggctgcctgttgtgagtcatgatctgctgcgtctgctgccaaatggt
tctctacacattactgccagacctcagaatgacagtgatggattgcccacaccggagggt
agttacacctgcatctccacaaactcatttggatccatcatcagccgtactgtgactgtc
cagctttcaacactctctcatttcatgcttcacccagtaccccaatctgtgccacagcag
ggcctggcacgttttgagtgtcacgtggatggtctgcctccgcctcttatcacctgggag
aaggaccagtcacctgtgccctcccaacccagatttattacccttccaaatggtgttctg
cagatagtcaatgtccaacaggaagataccggaacctatcgttgcatggcagcaagtgca
tctcgcatacagtatagccaggatgccagactcacagtcacttcaggtcctcagattggg
ccagtggatgtggaaattattgctcctccaaagaacataactgtgattgcaggaaggaca
gctgtgatggaatgcatggctcatgcggacaccatgccttatgtctcctggatacggcaa
gacggaaagcctattaccacggatgcagttgtgctgtccactaacctgctgatttccaac
acccagccgcaccactctggagtgtatgtatgtcgtgccaacaagcccaagacccggcat
tttgcaaaagcagcagctgagttgcgagtactgggtcctccactactgtctcagcagcct
gaaaccatttccaggacacgtgccagcacagccaggtttatgtgcaaggcttttggtgat
cccatgcctttcattatttggatgaagaatggaaatccgatcctttcaaatggtcgtgtg
aagatccagagttctggcagtctagtcatcaaccagattggagtagaggatgctggctac
taccaatgcattgcgaagaacagcctgggcacagcctgtagtactgccaaactcacggtt
gttgtgcgtgaagggcttcctagtgccccaaagcaggtgtccatagtgtctatgactagc
acaacagcgctggtgacttgggagcgtccagaactaaatagtgaacagatcattggcttc
tccgtacactaccagaaaacgcttggcacagaaaacattgagtatcagtttgcagtcagc
aatgacacaactgagtttcaggtgaaggatctggagccaaataccaattacagcttttat
gtagtggcctactctcctctaggagctagtcagatgtccagttctgctactgtgcagatg
ctggaagatgttcccagtgctcccccccacttgtctctgctgagcacctcccctactgaa
atccatgttatgtggctccccctctctctggatctaagccagggcaaggtgaccaagcac
cggattgactactgtgccatggaagaggatcatatgtattccattgaagtggctggcaat
gaaacacaggtaacactgcatgaacttaagccaaaccaaatgtacaaggttcgcattgca
gctggcacgagtattgggtttggggagccctcagagtggatgcgacataggacaccagct
tgggaggatggtgctacaggtttgctgtttgctccttctgagctgaaagtgaaggcaaaa
atagactcccttcatgtcatgtggcagccaccacccaaccactctcaggtctccgggtat
aagctttactatagggaggtcagtctggaagagggtaaagctacagcagtccggctccga
aagaaaatgaagcactatgagattacagggctggcccctgatcatctctatgaagtcaaa
gtactggcatttagcaaacataaggatggctatgcggctgtgtggaaaggccgcacacag
aaggctccagtccagatggaagaggcaccccagcagaaagcttttccacaacctccaact
ggcgtgcgggcaactgccaacagctccacctccatctggctgcagtgggagaagccagca
ttcagcacagtcaaaattgtcaactacacagtgcgaagctccccactgggtatcaccaat
gcatctctggtcacatactgtgtcagctctggagaatcattccttctcactggtctcaga
ccattcacacgttatgagctggcagtccagtctaatgcacctggggcagcaggtccatac
agtaatgtggtgctgcagtccactcttcctgacaaaccatctacttcacccatgggtctg
cacatgagtccactgagcccttcctcagtgctgatgcgctgggagccaccagaagagccc
aatggcattgtacaggagtatctgattctgctgtccaccaacagcagccttcctgatagc
atgtggacgtctgtcgtgcgggatgggaatacctttagtgcggagatccaggggctagac
agtggctccatgtactatttcaagatagcagccagaactttggctggcattgggccatat
tcgcatgtgttgggaatactcatgccatctctaaaacgctccatgcctgatgttcttgac
gtccactctgtgacgggcatcattgttggagtctgtttgggactgctgtgcattctcctt
tgcatgtgtgtcagcttttgccagaccaagccaagatctgtttcacagagcctttcatat
agaaaaggccgatccggtactgttgtacagcaggagcggtgtgatggtcatgagttagaa
acacttatgttagcccgccctgaagatatgtccctgactctgacagaagtcactgaagaa
catagcctaatggaagctagcctggaaaatcatagtctacactcagagctcaagcctgca
tggaatggctcagtgagtcgcaactggacaagccacatcacaagctgcagtgatctggat
tggagagaatgtacgtctgtaaagaatggctgcctaacaattcccaggggtctcactgag
gacaggcaggctgcgacacattcagctgccatcagaacgcatgaagacaaacctgctgct
cctcatcaagtggaggcctccgtcattgtccattcagaacatttgaacagaacagttaaa
agcgagacggatagaaaggctgatttccaggaagtgccctcatctgttttcttgcacaca
tttagtgaggagacggccacctgccctcacagtctgaagaacggttttcgcaacaatgaa
gtgcttgagcgcctcctacaggctttggactcggactctacagtggcacggagagcagca
gagccctctggtgcctttgactctacctcagtatgtgataactaa
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