Polypterus senegalus (gray bichir): 120541684
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Entry
120541684 CDS
T08668
Symbol
sin3aa
Name
(RefSeq) SIN3 transcription regulator family member Aa isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120541684 (sin3aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120541684 (sin3aa)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
120541684 (sin3aa)
REST complex
120541684 (sin3aa)
Heterochromatin formation proteins
Other heterochromatin formation proteins
120541684 (sin3aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
120541684
NCBI-ProteinID:
XP_039629488
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All DBs
Position
12:complement(135709418..135810109)
Genome browser
AA seq
1276 aa
AA seq
DB search
MKRRSDEQDPVFSSQQRRLTSNTEGFQHRVLAPAPALYEAVTENMQPTTGIQYSVPQGYQ
VPGVAQSSGSHAHSPGTSVHNAAHHHTPTMPAHSGPVVQQNHPHPSAPTASAQGQQQFQR
LKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIM
GFNTFLPPGYKIEVQTNDLVNVTTPGQVHQITPHGIQIQPQPQPTHQQSQAPGAATPVTA
SSAAQSTPVKINKPLQSPASAPASQPSLSVPAYASPRSPPVQPHTPVTGTPTCVTPLQNN
QPVEFNHAINYVNKIKNRFQGQPDIYKAFLEILHTYQKEQRNAKEAGGNYTPALTEQEVY
AQVARLFKNQEDLLSEFGQFLPDANSSVLLSKTTAEKAESVRNDHGGTVKKPQLNNNKQR
PNQNGCQIRRHPGTGATPPVKVKKPKLLGLKEQPLTEAGKHGAGTESLFFEKVRKALRST
EAYENFLRCLVIFNQEVISRSELVHLASPFLGKFPELFTWFKNFLGYKESSHIESFPKER
GTEGIAMEIDYASCKRLGSSYRALPKSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTF
VSSKKTQYEEHIYRCEDERFELDVVLETNLATVRVLEAVQKKLSRMSAEEQAKFRLDNTL
GGSSEVIHRKAIQRIYGDKAPDIIDGLKKNPAVSVPIVLKRLKTKEEEWREAQRGFNKIW
REQNEKYYLKSLDHQGINFKQNDTKVLRSKTLLNEIESIYDERQEQASEENAIPVGPHLT
LSYEDKQILEDAASLIIHHVKRQAGIQKEDKYKIKQIIYHFIPDLLFAQRVDLSDVEEED
EEEMDLDEGSTKKHNGVAGGVGTASNSPSKSKLLFTNTAAQKLRGTDEVYNLFFVNNNWY
IFLRLHQILCHRLLRIYGQAEKQIEDDCREREYLSLKRDKSENPAIQLRLKEPMEVDVED
YYSAFLEMVRNLLDGNMDASQYEDSLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEIC
VQVTDLYLSEGLTGATGGLLSTQASRMTSEAAYQRKAEQLMSDENCFKLMFVQSRGQVQL
TIELLDTDEDNSDEPVEAERWSDYVERYVNSDSASPELREHLAQKPVFLPRNLRRIRKCQ
RGREQHEKECKETGGKKTLENVENLDKMKCNFKLNSYKMVYVFKSEDYMYRRTALMRAHQ
SHEKVSKRLHHRFQSWVDKWIKEHVTEDMVTNTNKWLMGEGLDELLPCTTSCNMEILHFM
NINKYRVKYGTTYKTS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgacggtcagatgaacaggatcctgtcttttcatcgcaacagcggcgtctgaca
agcaatacagaaggatttcagcaccgtgttttggcaccagcgccagctttgtacgaagct
gtcacagaaaacatgcaacccactactggcattcaatattctgttcctcaaggttaccag
gttccaggagtggctcaaagttctggtagtcatgctcattccccagggacatcagttcat
aatgccgctcatcatcacactccaactatgccagcacacagtggaccagtggtacagcaa
aaccaccctcatccctcagcacccactgcctctgcccagggtcagcagcagtttcagagg
cttaaagttgaagatgccttgtcctatctagaccaggtgaagttacagtttggtagtcag
ccacaggtgtataatgatttccttgatattatgaaagaatttaaatcacaaagcattgat
acaccaggggtgatcagtagagtatctcaactcttcaagggtcatccagacctaatcatg
ggcttcaacacatttttacctcctggatacaaaattgaagtgcaaactaatgatcttgta
aatgttacaacaccaggacaagtgcatcagatcacacctcatggtattcaaattcagcct
cagccccagccaacacatcagcaatctcaggcccctggagcagccactcctgttacagcg
tcttcagctgctcagtcaacaccagtcaaaatcaataagcctttgcagtcaccagcatca
gctccagccagtcagcccagtctctcagtccctgcatatgcctctccacgctctcctcct
gtgcagccacatacgcctgttactggcacaccaacttgtgtcactccgctgcaaaacaac
cagccagtagagttcaatcatgccattaattatgtcaataaaataaagaatcgtttccag
ggtcaacctgacatttacaaggcattcctggaaatactgcacacctaccagaaggaacaa
cgaaatgcaaaggaagctggaggaaactatactccagcccttacagaacaagaggtttat
gcacaagtggctcgtctttttaaaaatcaggaagacctcctctcagagtttggccagttc
ttgcctgatgctaacagttctgtacttttaagcaagaccactgcagagaaggcagagtca
gtacggaatgatcatggcggcactgtcaaaaaaccacagctgaacaataataaacagaga
ccaaaccagaatggctgccagattcgacggcacccaggaacaggggccactcccccagtt
aaggtaaaaaaacccaaactgcttggcctcaaagagcagcctttgacagaagcaggcaaa
catggagctggcactgagtcacttttctttgagaaggttaggaaagctctacgcagcaca
gaggcatatgagaatttcctgaggtgtctggttattttcaaccaggaggtgatttctcgc
tcagaactggtacatttggcatcaccttttttagggaaatttccagaattgtttacgtgg
tttaaaaatttcctgggctacaaagagtcttcacacattgagagtttccccaaagaaagg
ggcactgagggcatcgccatggagattgattatgcttcttgtaaacgacttggttcaagc
tacagagcactacctaagagctaccaacaacctaagtgtactggcaggactccgttatgt
aaagaggttttgaatgacacttgggtgtcttttccttcatggtcagaagattcaactttt
gtaagttcaaaaaagacccagtatgaagagcacatttacaggtgtgaagatgaaaggttt
gagctggatgttgttttagaaacaaaccttgcaacagtacgtgttttggaggcagtgcag
aaaaagctatctcgtatgtctgcagaagaacaagcaaaatttcgattagacaacacactt
ggtggttcttcagaggtcattcaccgaaaagcaattcagaggatatatggtgacaaggca
cctgatataatagatgggctaaagaaaaatccagcagtttcagttccaattgttcttaaa
aggttaaaaacaaaagaggaagagtggagagaagcccagagaggttttaataagatttgg
agagaacagaatgaaaagtattatttaaagtcactggaccatcagggcattaattttaaa
cagaatgataccaaagtgctacgttcaaagacactacttaatgagatagagagcatatat
gatgagagacaagagcaagcatcggaggaaaatgcgattccagtaggaccacatttaacc
ctgtcatatgaggacaagcagatcctggaggatgctgcatctcttattatccaccatgtt
aaaaggcaggctggtattcaaaaagaagacaaatataagatcaaacagatcatctaccac
ttcataccagatttgctatttgctcaaagagtggacctttctgacgtggaggaagaagat
gaggaggaaatggatttagatgaaggcagcactaaaaagcacaatggagtggcaggtgga
gtagggactgcaagtaacagcccctccaagtctaagttactgtttactaatacggctgcc
caaaaactgagaggcacagatgaagtatataacctcttctttgttaacaataactggtat
attttcttaagactccatcaaatcctgtgccacaggcttttgagaatttatggtcaagca
gagaagcagattgaagatgactgtcgtgaaagagaatatttgagcttaaaaagagacaag
agtgagaacccagccattcagctcaggctaaaggaaccaatggaagtagatgttgaagat
tactattcagcttttttggagatggtgaggaatttgcttgatgggaacatggatgcctct
cagtatgaggattccttaagggaaatgtttaccattcatgcttatattgcattcacaatg
gacaaacttatccagagtattgtaagacagctacagcacattgtaagtgatgaaatctgt
gtgcaggtgacagacttatacctgtctgaaggtttaactggagccacaggtggcttatta
tccactcaagcatccagaatgacttctgaggcagcttatcagcgcaaggcagagcagcta
atgtctgatgagaattgtttcaagttaatgtttgtgcaaagtcgaggtcaagttcaactg
actattgaacttctggatacagatgaggataactctgatgagccagtggaagctgagcgg
tggtcagattacgtagaacgttacgtaaactccgattctgcttctccagagttgagagaa
cacctggcacaaaagcctgtgtttctgccgaggaatctgcgtcgtatacggaagtgccag
aggggaagagagcagcacgaaaaggaatgtaaagagacaggtggtaagaagacccttgag
aatgtggaaaacttggacaaaatgaaatgtaattttaagctaaattcgtacaagatggtg
tatgtgttcaagtcagaagactacatgtacagacggaccgccctaatgagagctcatcag
tcacatgaaaaagtaagcaagcgtctacaccatcggttccagagttgggtagacaagtgg
ataaaagaacatgtcactgaagatatggtgacaaatacaaacaaatggctaatgggagaa
ggtcttgacgagctgttaccatgcaccaccagttgcaacatggaaattttacacttcatg
aacattaataagtacagagtgaagtatggcacaacttacaagacatcgtaa
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