Polypterus senegalus (gray bichir): 120541689
Help
Entry
120541689 CDS
T08668
Symbol
vcla
Name
(RefSeq) vinculin a isoform X1
KO
K05700
vinculin
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04510
Focal adhesion
psex04520
Adherens junction
psex04810
Regulation of actin cytoskeleton
psex04820
Cytoskeleton in muscle cells
psex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120541689 (vcla)
04520 Adherens junction
120541689 (vcla)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120541689 (vcla)
04810 Regulation of actin cytoskeleton
120541689 (vcla)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
120541689 (vcla)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120541689 (vcla)
04147 Exosome [BR:
psex04147
]
120541689 (vcla)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120541689 (vcla)
Exosome [BR:
psex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120541689 (vcla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
DASH_Spc34
Fungal_trans_2
Motif
Other DBs
NCBI-GeneID:
120541689
NCBI-ProteinID:
XP_039629502
LinkDB
All DBs
Position
1:complement(267011535..267167926)
Genome browser
AA seq
1080 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLTGPVAAVQAAVSNLVRVGKE
TVQTTEDQIMKRDMPPAFIKVENACTKLVQAAQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRKIIRVCKGILEYLTVAEVVETMEDLVTYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISAIKIYVTTKSSKSQGIEEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWANKKDTEAMKRALALIDSKINQAKGWLRDPNAQPGDAGEQAI
RQILDEAGKVGELCAGKERRDILGTAKTLGQMTDQVAEMRARGQGGSPGALQKAAQVSQG
LDLLTAKVGNAAQKLEAMTNSKQAIAKKIDAAQNWLADPNGGPEGEENIRGILAEAKKIA
DLCEDPKERDDILRSFGEISALTAKLKDLRRQGKGDSPEARALAKQIATALQNLQSKTNK
AVANSRPVKAAVNLEGKIEQAQRWIDNPNIEDRGVGQAAIRGLVAEGRRLANAMMGPYRQ
ELLGKCDRVEQLTAQLAELAARGEGEGPQARAVTAQLQESLKDLKSKMQEAMTQEVSDIF
SDTTTPIKLLAVAATAPPDAPNREEVFDERAANFENHAAKLGATAEKAAAVGTANKSTVE
GIQATVKSARELTPQVVSAARILLRNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAIDT
KSLLDASEEAIKKDIDKCRVAMANVQPQMLVAGATSIARRANRILLVAKREVENSEDPKF
REVVKAASDELSKTISPMVMDAKAVAGNIQDPGLQKSFLESGYRILGAVAKVREAFQPQE
PDFPPPPPDLDQLHVSDEPAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQKAGEMVNQPMM
VAARQLHDEARKWSSKPDVTDEGNDAAEADVDIDEEDDADDVEFTLPSDNEDDYEPELLL
MPTNQPVNQPMLAAAQSLHQEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRAL
IQCAKDIAKASDEVTRLAKEVAKQCTDKRIRTNLLQVSTIQKWEGQLPRRLHFVCFTPFI
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgccggtttttcacaccaagaccatagagagtatcctggagcctgtggctcagcagata
tcccatctggtgataatgcacgaagaaggggaggtggatggaaaagcaattccagaccta
acgggacccgtggccgcagtgcaagcggctgtcagcaacctcgtcagggttggaaaagag
actgttcagacgacagaggaccagatcatgaaaagggacatgccgcctgcttttattaag
gtggagaatgcatgtactaaactagttcaggcagcccaaatgctgaaagccgatccttat
tcagtgccggcacgggattacctgatagatggatcaagggggattctttcggggacttca
gatctgcttttgacctttgatgaagcagaggttcgaaaaatcatccgtgtctgtaagggc
attttggaatatttaacagtggcagaggttgttgagacaatggaagacctagtaacttac
actaaaaatctgggaccgggtatgacaaaaatggcaaaaatgattgatgagcgacagcag
gagttaacgcatcaagaacacagggtgatgttggtgaactctatgaacacagtgaaggaa
ctgcttcctgtgttgatctcagcaattaaaatctacgtaacaacaaaaagttccaaaagt
caaggaattgaagaggctctgaagaatcgtaattttactgtggaaaagatgagtgcagag
atcaatgagattatccgtgtgctgcagcttacttcctgggatgaagatgcttgggcaaac
aaaaaggacactgaagcaatgaagagagctttggctttaattgattctaaaattaatcag
gcaaaaggatggttaagagaccctaatgcacaaccaggtgatgccggagaacaagctatt
agacaaatactcgatgaagctggaaaagttggagagttgtgtgctggaaaggagagaagg
gacatcctgggaacagcaaagacacttggtcagatgacagatcaagtagctgaaatgcgg
gctaggggtcaaggtggtagtcctggtgctttacagaaagcagcacaggtttcccagggc
ctggacctactcactgcaaaagtaggtaatgcagcccaaaagctggaggctatgaccaac
tccaagcaagcaattgccaagaagattgatgctgcacagaattggcttgcagaccctaat
ggtggccctgagggagaagaaaatatccgtggaatcctggcagaagcaaagaaaattgca
gacctgtgtgaggatccaaaagagagagatgatatcctgcgctcttttggagagatttct
gcactgacagctaaactaaaggatctaaggaggcaaggcaaaggggatagcccagaggcc
agagccttggccaagcagatagccacagccttacagaatctacagtcaaagaccaacaaa
gctgtggccaacagcaggcctgtgaaagcagccgttaacttggaaggtaaaattgaacaa
gctcaacgctggatagacaatcccaatattgaagatcgtggtgtaggtcaggctgcaata
cgtggacttgtggctgaaggcagaagactggcaaatgccatgatgggcccttatcgtcaa
gaactccttggaaagtgtgaccgggtggagcagctgactgctcagctggcagaactggca
gctcggggtgagggtgaagggccccaagcacgagcagtgacggctcagctgcaggagtca
ctcaaggatttgaaatcaaaaatgcaggaagcaatgactcaagaggtttctgatatcttc
agtgatactactactccaattaaattgctggctgtggcagcaacagcgccccctgatgct
ccaaacagggaagaggtgtttgatgagcgggctgccaactttgagaatcatgcagctaag
cttggagctacagcagagaaagcagcagctgtaggaactgccaataaaagtacagtggag
gggatccaggcaacagtgaaatctgccagagaattaacaccacaggttgtctctgctgct
cgtattctcctgaggaatcctggcaatcaggcagcctatgagcattttgaaaccatgaag
aatcagtggattgacaatgttgaaaaaatgactggtttggttgatgaagccattgataca
aaatccttgctggatgcctctgaagaagccattaagaaagacattgataaatgtagagtg
gccatggccaatgttcaaccacagatgcttgttgctggggctactagcattgcccgacgg
gctaatcgaatcctgcttgttgctaaacgtgaagttgagaactcggaagatcctaaattt
cgtgaagtggtgaaggctgcgtcagatgaactgagcaaaactatttctcccatggtaatg
gatgccaaagcagtagcagggaatatccaagacccaggcctccaaaaaagcttcttggaa
tctggatacagaattctgggagctgtagctaaagtacgggaggccttccagccccaagag
ccagacttcccccctcctccacctgaccttgatcagcttcatgtgagcgatgagcctgct
ccacccaaacccccacttccagagggagaggtacctcctccaagacctccacctccagaa
gaaaaggatgaagagttccctgaacaaaaagcaggtgaaatggtcaaccagccaatgatg
gttgctgccaggcagttgcatgatgaagccaggaagtggtctagcaagcccgatgtgact
gatgagggtaatgatgctgctgaggcagacgtagatatagatgaggaggatgatgccgat
gatgttgagttcaccctcccctctgacaatgaagatgattacgagcctgagctgctctta
atgccaaccaatcagcctgttaatcagcccatgctggccgctgctcagtctttgcaccag
gaagcacgaaagtggtccagtaagggtaatgacatcataggtgctgccaaaagaatggct
ttgctgatggccgaaatgtcccggctggtgcgaggtggcagtggcaacaagcgtgctctt
attcagtgtgccaaagacattgccaaggcttcagatgaggtcaccagactggccaaggag
gtggccaagcagtgcactgacaagcgcatccgaacaaaccttctccaggtgagtactatc
cagaaatgggaaggacagttaccgaggaggctgcattttgtttgttttacccctttcatt
tga
DBGET
integrated database retrieval system
