Polypterus senegalus (gray bichir): 120541697
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Entry
120541697 CDS
T08668
Symbol
rfc5
Name
(RefSeq) replication factor C subunit 5 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03030
DNA replication
psex03410
Base excision repair
psex03420
Nucleotide excision repair
psex03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
120541697 (rfc5)
03410 Base excision repair
120541697 (rfc5)
03420 Nucleotide excision repair
120541697 (rfc5)
03430 Mismatch repair
120541697 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psex03032
]
120541697 (rfc5)
03036 Chromosome and associated proteins [BR:
psex03036
]
120541697 (rfc5)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120541697 (rfc5)
DNA replication proteins [BR:
psex03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
120541697 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
120541697 (rfc5)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
120541697 (rfc5)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
120541697 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
120541697 (rfc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_14
AAA_22
AAA_24
RuvB_N
AAA_16
ResIII
AAA_assoc_2
DEAD
DUF815
PhoH
AAA_7
TIP49
ATPase_2
AAA_5
AAA_19
AAA_30
TniB
DNAX_ATPase_lid
nSTAND3
AAA_2
Mg_chelatase
T2SSE
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
120541697
NCBI-ProteinID:
XP_039629508
LinkDB
All DBs
Position
12:complement(24571009..24610480)
Genome browser
AA seq
333 aa
AA seq
DB search
MASNRVPLESRNLPWVEKYRPQKLDDLISHQDILSTIQRFIKEDRLPHLLFYGPPGTGKT
STILACAKQLYKDKEFNSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDEA
DAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLSQEQMVPRLE
YVIAQENVNTSPDGLKALVNLSSGDMRRSLNILQSTHMAYEVVTEETVYMCTGHPLKSDI
ANILDWMLNKDFTTAYNNIMELKTVKGLALHDILTEIHLLVHRVDFPASVRIHLLVKLAD
TEYRLASGTSEKIQLSSMIAAFQVARDMVVAEA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaaacagggtccctttggagtcgagaaatctgccgtgggtagaaaaatacagg
ccacagaagcttgatgatttaatatcgcaccaggatattcttagtacaattcagcgcttt
atcaaagaagacagacttccacatttgctattctacggtcctcccgggactggaaagaca
tctacgattctggcatgcgcaaaacaattatataaggataaagaatttaattccatggtt
ttggagctaaatgcttctgatgacagaggtatagatgtagtacggggacctattttgagc
tttgcaagcaccagaacaatcttcaaaaaaggctttaaattggtcatattagatgaagca
gatgccatgactcaagatgcccaaaatgctttaagaagagtgatcgagaagtttacagag
aatacaagattctgtttaatctgcaactatctttcgaagatcattccagcattgcagtct
cggtgcacaaggttcaggtttggcccactttcccaggaacagatggtccccagactggaa
tatgtcatagcacaggagaatgttaatacaagtccagatgggttgaaggctcttgtgaat
ctgtcatcgggtgatatgcgacgatctctaaatattttacagagtacccatatggcatat
gaagtagttactgaagaaacagtctatatgtgtactggtcatcctctgaagtctgatatt
gctaacattctggactggatgctaaacaaagacttcacaacggcatacaacaacattatg
gaacttaaaacggtgaaaggtttggctctgcatgacattctaacagagattcatctcctg
gtacacagagttgactttccagcttcggtgcgaattcatttgcttgtcaagttggcagac
actgaatacagactggcttctggaacaagtgagaaaatccagctgagctcaatgattgca
gcatttcaagtggccagagatatggtggtagctgaagcctga
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integrated database retrieval system
