Polypterus senegalus (gray bichir): 120541702
Help
Entry
120541702 CDS
T08668
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120541702
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
psex03310
]
120541702
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120541702
Nuclear receptors [BR:
psex03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
120541702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120541702
NCBI-ProteinID:
XP_039629517
LinkDB
All DBs
Position
12:138552750..139111608
Genome browser
AA seq
505 aa
AA seq
DB search
MWSCTEAETELCWPAAAETAVKGFCSGATFLIWTWSLMMYFVISAMKAQIEIIPCKICGD
KSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGM
SRDAVKFGRMSKKQRDSLYAEVQKHRMQQQQRDQQQQPGEAEPLTPTYSLSSNGLTDLNE
DLSSYIDGHTTDGSKADSAVNSFYLDIQPSPDQSGLDINGIKPEPICDFTQGSGFFPYCS
FTNGETSPTVSMAELEHLAQNISKSHMETCQYLREELQQMTWQTFLQEEMESYQNKPREV
MWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDSQNNT
VYFDGKYAGPEVFKTLGCDDLISSVFEFGKNLCSLHLCEDEIALFSAFVLMSADRSWLQE
KVKVEKLQQKIQLALQHVLQKNHREDEILTKLICKVSTLRALCSRHTEKLSAFKAIYPDI
VRAHFPPLYKELFGSEFEQPMPVDG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcatgcactgaggcagagacagagctgtgctggccagctgctgctgagacagca
gtgaagggcttttgctctggtgctacttttctcatatggacttggagcttaatgatgtat
tttgtgatttcagctatgaaagctcaaatcgaaataattccgtgtaagatctgtggcgat
aaatcatcaggaattcattacggtgttataacatgtgaaggttgcaagggcttcttcaga
cgaagtcagcagagtaacgctacatactcttgtcctcggcaaaagaactgtctgatagac
cgaaccagtcgcaatcgctgtcagcactgtcgattacagaagtgtctcgctgttggaatg
tcacgtgatgctgtcaagtttggcaggatgtcaaagaaacagcgggacagtctatatgca
gaagtacagaaacataggatgcagcagcagcagcgtgatcagcaacagcagccaggagaa
gcagaaccactgacacccacctatagtctctccagcaatggattaacagatctgaatgaa
gaccttagcagctacattgatggccataccactgacggcagtaaagctgattctgctgtc
aacagcttctacctagatattcagccttcaccggatcagtcaggactggacatcaatggc
atcaaacctgaaccaatatgtgacttcacgcaaggatcaggcttctttccatattgctcc
tttacaaacggcgagacctctcctacagtgtctatggcagaactcgaacatctggcacaa
aacatctcaaagtctcacatggaaacgtgtcagtacttgagagaagagctccagcaaatg
acttggcagacgttcctgcaggaggaaatggagagctaccagaataagcccagggaagtc
atgtggcagctttgtgcgatcaaaataacggaggccatccagtatgtggtggagtttgcc
aaacgcatagatggtttcatggagttgtgtcagaatgatcaaatagtacttcttaaagct
ggttctttggaggtcgtgtttgttagaatgtgtcgtgcctttgactctcagaacaacact
gtctatttcgatgggaagtacgctggaccagaagtatttaaaacattaggttgtgacgat
ttgatcagctcagtctttgagtttggaaaaaacttgtgttcattacatctatgtgaagat
gagattgcgttattttctgcatttgtcttaatgtctgcagatcggtcctggcttcaagaa
aaagtaaaagtggagaaacttcagcagaagatacagctggcacttcagcatgttcttcaa
aaaaatcatagagaggatgagatattaacaaagttgatatgcaaggtctcaacactgcga
gcgttgtgcagcaggcatacagagaagctctcagcatttaaagcaatatatccagacatt
gtgcgtgctcacttccctcctttgtacaaagaattgtttggttccgagttcgagcagcct
atgccagttgatgggtaa
DBGET
integrated database retrieval system
