Polypterus senegalus (gray bichir): 120541719
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Entry
120541719 CDS
T08668
Name
(RefSeq) contactin-4-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
psex04515
]
120541719
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
120541719
Cell adhesion molecules [BR:
psex04515
]
Immunoglobulin superfamily
Contactins
120541719
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
psex00537
]
Others
120541719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Ig_5
Ig_C17orf99
Pur_ac_phosph_N
C2-set_2
Ig_6
Tissue_fac
fn3_2
fn3_4
Motif
Other DBs
NCBI-GeneID:
120541719
NCBI-ProteinID:
XP_039629539
LinkDB
All DBs
Position
12:complement(2675855..3105591)
Genome browser
AA seq
1026 aa
AA seq
DB search
MMLLWKLLVLQSFMGCLADNSALHGPVFTQEPSSVVLSGDKENKVVLNCEAKGSPPPNYR
WKANGTFLDPRVDYHYTLVRGNLVISRLNKDRDVGSYQCVASNPFGTIVSKEASLQFAYL
ESFKAQTRSAVSVREGQGVVLLCGPPPHSGELTYSWIFNEYPSFVQQDNRRFVSQETGNL
YIAKVEPSDVGNYTCVVTNTVTQSRVQGPPTPLVLRTDGVMGEYEPKIEVQFPESVPVAK
GSTVKMECFALGNPVPAITWRRADGIPFPRKVDSAKKSGVLEIPFFQQDDAGLYECIAEN
SKGKNVARGKLTFYAQPHWVQRISDAHMSIDDGLSWECRASGKPKPSYKWLKNGEPLETV
EERIQVTNGVLTISALNLMDSGMYQCVAENKYGEIYSTAELRVIAVAPDFSENRLKRLSM
VKVGGEVVIHCKPRMSPRGIFSWSKGNEALRENERISVLEDGSLRIANVTKADDGSYTCV
ARNQFGEASSSGILVVKDATVITGPPSDMDVTVGESIVLPCQVSHDISLDPTFTWSYNGE
PIDFRRDGDYFEKVGGQHSAGDMMIRSVQLKHAGRYSCVVETSVDAVSAEADLVVRGPPG
PPEHVEVEEISDTTALLSWRPAPDNHSPITSYTIQARTPFSVGWQAVTTVPELIDGRQLT
ATVVELSPWVEYEFRVVANNAIGIGESSVPSKQARTEEAIPKVTPSNVSGGGGSRSELVI
TWEPVPEELQAGPGFGYVVAFRPLGSTSWMQAAVTSADASRYVYKNESIPPFSPYEVKVG
VYNNKGEGHFGPSVTIYSAEEEPTRAPTKIRARSLSASEIEVSWRPVSGNTSKRRVLGYE
LRYWSQDGKEEMASIGRTVGNKTLAVIKGLKGSMLYHITVRAYNSAGVGPPSVTVNATTK
KPPPSQPPLKIVWNTSDSKIILNWDQVKALENESEVTGYKVLYKRNKQSSTSVIETNTTS
VELSLPSDDEYVIQIKPLSDGGDGSSSKQITIPGSSGSDAVASASKVSTLSALSTIVLSF
TARSTL
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcaatcattcatgggctgccttgcagataac
agcgctcttcatggacccgtcttcacacaggagccgagcagcgtggtgctttcaggggat
aaagagaacaaggtggtgttgaactgcgaagccaaagggagcccccctccaaactacagg
tggaaggctaacgggacatttctcgaccccagagtggattatcattatactctagtccga
gggaacttggtaatcagcaggctgaacaaggaccgagatgtgggctcataccagtgcgtg
gcgtccaatccgtttgggaccatcgtcagcaaggaggccagccttcagtttgcatatctg
gaaagcttcaaggcgcagacgcgcagcgcggtttctgtccgtgaaggacaaggcgtcgtt
ctgctctgcggccccccgccgcactctggagagctcacgtactcctggatcttcaacgag
tacccgtcattcgtgcagcaggacaaccggcgctttgtgtcccaggaaacgggaaacttg
tacatcgccaaagtggagccttcagatgtggggaactacacctgcgtggtgaccaatacg
gtgacccagagccgagtgcagggccccccgacgccgctggtcctgcgcactgacggagtg
atgggggaatacgagcccaagatcgaagtgcagtttccggagtccgtgcctgtggccaaa
gggtccaccgtcaagatggaatgctttgcactgggaaacccagtgcccgccatcacctgg
aggagagccgacggaattccttttcctagaaaggtggactcggccaagaagagcggggtg
ttggagatcccgtttttccagcaggatgacgcgggtttatatgagtgcatcgcagaaaat
tccaaaggaaagaacgtcgcgagagggaagttgactttttatgctcagcctcactgggtc
cagagaataagtgatgcccacatgtccatcgatgacggcctgtcctgggagtgcagggcc
agcgggaagccaaagccatcctacaagtggttaaagaacggggagcccctcgagacggtc
gaggaaagaattcaggtgaccaacggcgtcctcaccatctccgccttgaacctcatggac
tcagggatgtaccagtgtgtggctgaaaacaagtacggcgagatctactccacggccgag
ctgcgagtcatagctgtggcccccgacttctcggagaatcgcttgaagaggctctcgatg
gtgaaggtgggcggtgaagttgtcattcactgcaagccccggatgtctcccagaggaatc
ttctcctggagcaaagggaatgaagccctgcgagaaaacgagaggataagcgttctggaa
gatggaagccttcgaatcgccaatgtcaccaaggccgatgatgggagctacacgtgtgtg
gcaagaaaccagtttggggaagcgagcagcagtggcatcctcgtggtgaaggatgcaact
gtcatcacgggccccccgtccgacatggacgtgactgtgggtgaaagcatagtcctgccg
tgccaggtgtcacatgacatctccctggacccaacgttcacctggtcctacaacggagag
cccatcgacttcagaagggatggcgactactttgagaaggtcggagggcagcattccgca
ggggacatgatgatccgaagtgtgcagctcaaacatgccgggcgctactcctgcgtggtg
gagaccagcgtggacgccgtgtctgccgaagcggacctcgttgtcagaggtccgccgggc
ccacctgagcacgtagaagtagaggaaataagcgacaccacggcgctgctgtcctggagg
ccggcccccgataaccacagccccatcacctcctacaccattcaggccaggacccccttc
tctgtgggctggcaggccgtgaccacagttccagagctcattgacggccgacagctgaca
gccacggtggtcgagctcagcccctgggtggagtacgagttccgggtcgtggcgaacaac
gccattggcatcggggagtcgagcgtgccgtccaaacaagcaaggaccgaggaagccatt
ccaaaggtgacgccatccaacgtgagcggaggcggagggagccggtctgagctggtaatc
acctgggagcctgttcccgaagagctgcaggccgggccgggattcggctacgtggtggcc
tttcgccccctgggctccaccagctggatgcaggccgcggtgacgtcggcggacgcctcc
agatacgtctacaagaacgagagcatcccgccgttctccccgtacgaggtgaaggtcggg
gtgtacaacaataagggcgaaggccacttcggcccctcggtcaccatctactcggcggag
gaggaacccaccagagcgccaactaaaatccgagctcggagtctttctgcctcagaaatc
gaagtctcctggcgtccggtctccgggaacaccagcaagaggagggtcttaggctatgag
ctgagatactggagtcaggatggaaaagaagagatggcaagcatcggaagaaccgtggga
aacaaaacgctggccgtcatcaaggggctgaagggcagcatgctgtaccacatcacggtg
cgggcatacaacagcgccggcgtggggccacccagcgtgacggtcaacgccaccaccaag
aagccccccccaagtcagccccccttgaagatcgtgtggaacacgtcggactccaagatc
atcctgaactgggaccaggtgaaggccctggagaacgaatcggaggtgaccggctacaag
gttttatataaaagaaacaagcagagcagcaccagcgtcatcgagaccaacacgacatcg
gtggagttgtccctgcccagtgacgatgagtacgtcattcagatcaaacccctgagcgac
ggcggcgatggcagcagcagtaagcagatcacaatcccgggctcttcaggctcagatgcc
gtcgcctcagcgtctaaggtgtccaccctgtcggccctcagtacaatcgtgctgtccttc
acagccaggtcgacgttatga
DBGET
integrated database retrieval system
