Polypterus senegalus (gray bichir): 120541723
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Entry
120541723 CDS
T08668
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120541723
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GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
DUF7605
MMR_HSR1
Calpain_III
Motif
Other DBs
NCBI-GeneID:
120541723
NCBI-ProteinID:
XP_039629548
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Position
12:complement(140413493..140451039)
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AA seq
623 aa
AA seq
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MATGGVKMSGPVCLIENVSGKLQINQKAVDILSGINQPVVVASIVGMYRTGKSYLMNKLA
GQKKGFSLGSTIQSHTKGIWMWCVPHPMRDGQTLVLLDTEGLGDVEKGDNKNDNWIFALA
VLLSSTLIYNSMGTINNDAVQNLHYVTELTELIKVKSKQEDPDESSEFARFFPSFVWAVR
DFSLQLELNGRPVTADEYLENSLKLKPGVNKNVQNYNLPRECIRNYFPKRKCFVFERPST
VECMRKLEEMDESKLEKGFIEETKKFYNFIMRETSVKTLSGGITVTGRLLGNLATTYVDA
ILSGSVPCLENAVLALAQIENSTAISLAVAHYCEEMDKRAKLPTSTQAELSDVHLQCEKE
AVKIFMERSFKDEDQKYYLELMKLLEEQYTLVCQRNEKESREVCSSLLQNLSKKMREAQN
AGNYMKPGGFKIYQVDLEGVIRDYKGNPRKGIMADTVLNEFLRAKESEGKGILNADKSLS
AQEKQIKEEQTKRLATERENEVIKKQQEILQKRIEDQKKAFDENIKQLQKKCEEEQKKAK
EESERFLNVRLKEQQQLLEEGFEKKAGLLNEEINRLKQEVANESKPSLFGQILDTVGSAA
TLFMPGIGGKLLGVGTSLLSKLF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccggaggtgtcaaaatgtcaggtccagtgtgcctcatagaaaatgtctcgggg
aaactccagataaatcagaaggctgtggacatcctatctggcatcaatcagccagtggtt
gtggcatccattgtgggcatgtatcgcaccggcaaatcctatctaatgaataagctagca
gggcagaaaaagggcttttctctgggatcaaccatccagtctcacacaaagggcatttgg
atgtggtgcgttccacacccaatgagggatggacaaactctggtgctgctggacactgaa
ggactgggtgatgtggagaagggagataacaaaaatgataactggatctttgctttggct
gtcctcctgagcagcacactgatctacaatagcatgggcaccatcaacaatgatgctgta
cagaatttgcactatgtgactgagctaactgagctcatcaaggtaaaatcgaagcaagaa
gacccagatgagtcatcagaatttgctcggttcttcccttcttttgtatgggcagtgcga
gatttcagtcttcaactagaactgaatgggaggcctgttacagcagacgagtaccttgag
aactctctcaagcttaaacctggagtcaacaaaaatgtccaaaattacaacttacctcga
gagtgcatccggaactacttccccaaacgcaagtgctttgtgtttgaacgaccctccact
gtggagtgcatgcgaaagctggaagaaatggatgagtcgaagctagaaaagggatttata
gaagagacaaagaagttctacaatttcatcatgagagaaacatccgtaaaaaccttaagc
ggaggcatcactgtaactggccgtttgctgggaaatttagccaccacatatgtggacgca
atcctcagtgggtccgtcccatgtctggaaaatgccgtgttagctcttgcccagattgaa
aactcgactgcaatcagccttgctgttgcccattactgtgaggagatggacaagcgagcc
aaattgcctacttcaactcaggcagagctatctgacgtgcatcttcagtgtgaaaaagaa
gcggttaaaatctttatggagcgatcttttaaggatgaagatcagaaatactatttagag
ctaatgaaattgttggaagaacaatatactttagtttgtcaaaggaatgaaaaggaatca
agggaggtttgctccagtctcctgcagaacctctccaagaaaatgagagaggcgcaaaac
gccgggaactacatgaaaccaggtggattcaagatttatcaggtggacctggaaggtgtg
atccgtgactacaagggcaaccctagaaaaggcatcatggctgacacggttctgaatgaa
tttctgagggctaaagaaagtgagggcaaagggatcttgaatgcagataagtctctttca
gctcaggaaaaacaaattaaagaggagcaaaccaaacgtttagcaactgaaagagaaaat
gaagtaattaagaagcagcaggaaatccttcagaagcgaatagaagatcaaaagaaggca
tttgatgagaacatcaagcagctccagaaaaaatgtgaagaagaacagaaaaaggcaaag
gaagaaagtgagagattcctgaatgtaaggcttaaggaacagcaacagcttctggaggaa
ggatttgagaaaaaagcaggactgttgaatgaagagattaatagactgaagcaggaggtt
gcaaatgaaagcaaaccatcattgtttggacaaattttggataccgttggatcagctgct
acattgttcatgccaggaattggaggaaagctgcttggagttggcacatcactgctttct
aaattgttctga
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