Polypterus senegalus (gray bichir): 120541748
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Entry
120541748 CDS
T08668
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120541748 (lingo1a)
Membrane trafficking [BR:
psex04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
120541748 (lingo1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
ig
Ig_2
LRR_9
LRR_Zer-1
LRRNT
V-set
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
120541748
NCBI-ProteinID:
XP_039629585
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All DBs
Position
12:complement(141941772..142083696)
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AA seq
615 aa
AA seq
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MVAGEASVHSSLVACWQPILLLMLGTVLSGSATGCPARCDCNPQERSVLCHRKRLIAVPD
GIPTETRLLDLSKNRIKTINPDEFSPFPHLEELELNENVISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTHLDISENKIVILLDYMFQDLYNLKALEVGDNDLVFISHRAF
HGLSSLEQLTLEKCNLTSIPTEALSHLHSLIVLRLRYLNINVVKDYSFKRLYRLKVLEIS
HWPFLDTMTSNCLYGLNLTSLTITHCNLTSIPYVAIRHLVYLRFLNLSFNPIHTVEGGML
HDLLRLQEFHLVGGQLTIIEPYSFRGLNYLRILNVSGNYLSTLEESAFHSVGNLETLILD
SNPLACDCRLLWVFRRRWRLNFNRQQPTCTTPEFVQGKEFKDFPDVLLPNYFTCRKSRIR
DRQPQKVFVDEGHTVHFVCRADGDPVPVIMWLSPRKNLITTKTNGRLTVFPDGTLEVRYA
QIQDNGTYICIASNAGGNDTAVAHLHVRSYSPDWPLQPNKTLAFISNQPNDSGLNGTRAT
VPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGMS
SGAADAPRKFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggctggggaggccagtgtgcacagctccctagtggcttgctggcagcccatcttg
ctgttgatgcttggtactgtcttgtcaggctcggccactgggtgtcctgctcgttgtgac
tgcaaccctcaggagcgatctgttttgtgccatcgcaagaggttgattgcagttccagat
ggaattcccacagaaacacggctgctggatctgagcaaaaatcgtatcaaaaccattaac
cctgatgaattttctcccttcccccatcttgaggaactggaactcaatgagaatgtcatc
tctaccattgagccaggggccttcaacaatctctatggactgcggacgttgggtttgcgc
agcaacaagctgaaactcattcagctaggggtcttcacaggcttgagcaaccttacccat
cttgatataagtgaaaataagattgttattctgctggactatatgtttcaagacctttat
aaccttaaggctttagaggttggtgataatgacttggtctttatttctcaccgcgccttc
catggtctcagcagcttggaacagcttactctggagaagtgcaacttgacatccattcct
acagaagctctctctcacctccatagcctgattgtgttgcgactgcggtaccttaatata
aatgtggtcaaggattattccttcaaacgcttgtacaggctcaaagtccttgaaatttcc
cattggcccttcctggacacaatgacctcaaattgcctgtatggccttaacctgacatcc
ctgaccataactcactgcaaccttaccagcattccatatgtggcaatccgtcacctggta
tacttgcgcttcctaaatctgtcttttaatcccatccacactgtggaaggtggcatgctt
catgatttgttgaggctgcaggaattccatcttgtaggtggccagctgaccattattgaa
ccatactcattccgaggcctcaattatttgcgcattcttaatgtctcaggcaactatctc
tccacactggaggaatctgcatttcactctgtgggaaatttggaaacacttattcttgat
agcaatcccttggcttgcgattgccgcttactctgggtcttccgtcgacgctggcgcctg
aactttaaccgacagcagccaacctgcaccacaccagagtttgtccagggaaaagagttt
aaggactttcctgatgttcttctccctaattatttcacctgccgtaaatcaaggatccgg
gacaggcagccccaaaaggtttttgtggatgaaggccacactgttcactttgtgtgccga
gcagacggtgatccagtgccagttattatgtggctatcaccacgcaagaatctcatcaca
acaaagactaatggaaggcttacagtgtttccagatggcaccctggaggtgcgctatgct
cagatccaggataatggcacctatatctgcattgctagcaatgcagggggaaatgacact
gccgtagctcacctgcatgtccgtagctactcacctgactggcccctccagcccaataag
actctggcctttatttctaaccagcccaatgacagtggtttgaatgggacaagagccact
gtgcccttcccgtttgacatcaaaactcttatcatagcaactacaatgggcttcatttca
tttcttggagttgtgctgttctgcctggtcctcttgtttttgtggagcagaggtaaaggg
aatacaaagcacaacattgaaattgagtatgtgccacgcaaatctgatgctggcatgagc
agtggtgctgccgatgctccccgcaaattcaacatgaagatgatataa
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