Polypterus senegalus (gray bichir): 120541904
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Entry
120541904 CDS
T08668
Name
(RefSeq) toll-like receptor 13
KO
K18808
toll-like receptor 13
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
psex04054
]
120541904
Pattern recognition receptors [BR:
psex04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120541904
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
LRR_1
TIR_2
LRR_9
LRR_LRWD1
LRR_EndoS
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
120541904
NCBI-ProteinID:
XP_039629803
LinkDB
All DBs
Position
13:7651206..7656216
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AA seq
947 aa
AA seq
DB search
MRQTLVTLCFCLVMSVESYSFNHCTVKRSHNNTFITASCIQMNFHVVPRDIPDQTNNLDL
SQNTISQLVRDDFKNLIFLKVLNVSGNHISRMANGTFKDLVALEVLNLSKNNISSLSDAT
FEGLASLVTLHLGENQIRSIGQASFQGLTSVRLVNLSFNGLCDLERLRSVLEVTHLRKLY
IANNNIGRFSTDCFPNASLQLNVLDVSRNPLSLFNVKANRLTSLQTLDLSFLDSTNGLQW
EVSSTALTHTMKRLYLSQSTIAAPGLLSILQTMVNSSVEYLKVSHLNLSQVPDVLQKVCL
WFPKLQILYLQGNNFVRVQGTPFVNCTRVTSLELSWNGLEELSEGVFNGLNQLRRLFLSH
NLLQAVPNLMGLATGLETLDLRNNQIEKIHPKDFAQLRNLRYLNLVGNKITAIQSQDLDG
LHHLEQLKLGNNLILDIPEPFSSSLRNLRTLELFANKMSALRKGTFRNLRSLVSLKMADN
QISQIEDGSFQGLSKLKVLYLGGNKIAMKMLITWNVFGGLSSLRELQVFDNELRCESDDD
FQRPPFSGLKDLTSLYFNSQRDEGLLNLPANSLQGLPSLKRVYANNLNLNFIHPDTFTYT
PHLQFLELTGNPLGQIHPSVFHSTPNLRVLYLDSTRVQSLDFLIHTNLTELQILTVASNE
ISAVNETHIRSLPKLNLLSAEKNPFTCSCENAWFLNWSLLDPQVQVTFLNTFTCSHPANY
VGMKLVDFKTDLCLVDYEFVGFISSFSIVAVTMVAASVYHYLRWQVAFVYYYFMAFLYDR
RQRAQPLQAYEYDAFVSYNRNDELWVLKELIPNLEEKQGWKLCLHHRDFEPGKAIVENIV
DSIYRSRKTICLISRHFLESEWCSREMQVASVRLMDEKEDVLVLVFLEDLPSAQLSPYHR
MRKLVKRKTYLKWPQNREEENLFWHKLKTALSAKEELCRDHPIALCL
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcagacacttgtcaccctgtgcttctgccttgtaatgtcggtggagagctactcg
ttcaaccactgcacagtaaagaggtcccacaacaacaccttcattacggcatcctgcatc
caaatgaactttcacgtcgttccaagggacatccccgaccaaacaaacaatttggacctt
tctcaaaacacaatttcccagctggtccgagacgatttcaagaacctgatatttctgaaa
gttctgaatgtgtcaggcaaccacatctcgcggatggccaatggcacctttaaggacctg
gtggcactcgaggtgctgaacctctccaaaaacaacatcagctcactttcagatgccacg
tttgaaggccttgctagcctcgtcacgttgcaccttggtgaaaatcaaattcggagcatt
ggccaggccagtttccaaggcttgaccagcgtcagactcgtcaacttaagtttcaatggc
ctgtgtgacctcgaaagactgcggtcggtcctagaagtcacccacctgaggaagttgtac
atcgcaaataacaacattggcaggttcagcactgactgcttccccaacgcgtctttacag
ttaaatgttctcgacgtttcacgtaaccctttatcccttttcaacgtgaaggcaaacaga
cttacgagtctccagactctggacctctcatttctggactcgaccaatggcctccagtgg
gaggtgagcagtacggctcttacgcatacaatgaagaggctgtacttgagccagtccacg
atcgccgctccaggcctcctgtccatcctgcagacgatggtcaactcctctgtagagtac
ctgaaggtctctcatttaaacctgagtcaggtgcccgatgtcttgcagaaggtttgcctt
tggtttcccaaactgcagattttataccttcaaggaaataactttgtgagagttcagggc
accccgtttgtaaactgcacacgggttaccagcttagagttatcctggaacggtttagaa
gaactctcggaaggcgtctttaacggactgaatcagttgcgccgcttgttcctgtcccat
aatttactccaagccgtccccaacttgatgggcctggcgacaggcttggaaacactcgac
ctaagaaacaatcagattgaaaaaattcacccgaaagattttgcacagttgagaaattta
aggtacctgaacctggtggggaataaaatcaccgcaatccaaagccaagaccttgatggt
cttcaccatctagagcagctcaagcttggaaacaacctcattctcgacatcccggagcct
ttttccagcagcttgcggaacctgcggactcttgagctttttgctaacaagatgagtgcc
ctcaggaagggcacctttcgaaatttacgctccctcgtatctctgaaaatggccgacaat
cagatctcacagattgaggacggttcattccaagggctttccaagctgaaggttttatat
ttaggaggaaacaagatcgccatgaagatgctgatcacctggaatgtcttcggtggattg
tcttcgctgcgggagcttcaggtgtttgacaacgagctgagatgtgagagcgacgacgac
ttccagcggccccctttctcgggactgaaggatctgaccagtctttacttcaacagtcaa
agagatgagggactgctgaacctccctgcaaattctcttcaaggactgccctcccttaag
agggtctatgcaaacaacctgaacctcaacttcatccatcccgacacattcacctacact
cctcacttacagtttttggagctgactggaaatccgctcggtcaaatccatccttcggtt
ttccactcaacgccgaacctcagggtcttgtacctggacagcaccagggtgcagtctttg
gacttcctcatccacaccaacctcacagagctgcagattctgacggtggcttcaaatgag
atcagcgcagtcaatgagactcacatccgttcgcttcccaagctgaatctactcagtgca
gaaaaaaacccgttcacctgcagctgtgagaacgcgtggttcttaaactggtccttattg
gacccccaagtccaggtgacttttctgaatacgttcacctgttcccacccagccaattat
gtgggaatgaagctggtggacttcaaaacagacttgtgtttggtagactatgaatttgtg
ggcttcatctcctcatttagcatagtggctgtgacaatggtggccgccagcgtctaccac
tatctccgatggcaggtcgcctttgtgtactactacttcatggccttcctgtatgaccga
aggcaaagggctcagccgctccaagcctacgaatatgacgcctttgtctcgtacaacagg
aacgatgaactttgggtcctgaaggagttaatcccaaacctggaagagaaacaaggttgg
aagttgtgtctccaccaccgcgattttgaaccgggcaaggccatcgtggagaacattgtg
gacagcatctacaggagccgcaagaccatctgcctcatcagccgccactttctggagagc
gagtggtgctccagggagatgcaggtggcaagcgtccgcctgatggatgagaaggaagac
gtcctggtcttggtgtttctggaggatctcccttctgctcagctctctccctaccacaga
atgaggaagctggtcaagaggaagacctacctgaagtggccccaaaacagagaagaggag
aacttgttctggcacaagctaaaaactgcactgagcgccaaggaggaactctgcagggat
caccccatcgcgctgtgcctttga
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