Polypterus senegalus (gray bichir): 120541968
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Entry
120541968 CDS
T08668
Symbol
abca2
Name
(RefSeq) ATP-binding cassette sub-family A member 2 isoform X1
KO
K05642
ATP-binding cassette, subfamily A (ABC1), member 2
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex02010
ABC transporters
psex04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120541968 (abca2)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120541968 (abca2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120541968 (abca2)
Transporters [BR:
psex02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
120541968 (abca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
Motif
Other DBs
NCBI-GeneID:
120541968
NCBI-ProteinID:
XP_039629924
LinkDB
All DBs
Position
13:1839037..1898331
Genome browser
AA seq
2506 aa
AA seq
DB search
MGFLHQLHLLLWKNVSLKRRSPWVLAFEIFIPLVLFFILLGLRQKKPTIRVKEVSFYTAA
PLTSAGIIPIMQSLCPDGQRDEFGFLQYKNSTVTQLLDRINEVVQESNLFDPDRPGLVEE
LESLQQHLESLSGDPNSLERPWNSSQGFTLGSVLKDQADFQQFLTRNLSLPNETAAALLA
SSISVQEVYHLFFGLTPSFAPLGGLKKRNTREGRSPAEKVLPREEYHLGGWRYAETDLIH
KLLSNSEKAVHRQAAWRLLSQTLGLNSTSRAGDLQSLKDMENILLTSGTLELLTCEDKDE
EFQHILLTPEGQQPLLQAYRTILCSGGASQRAQRFSGLARELKMQIDTQRVASKLRFEEV
NSTATQKHLSALLQDLNEMAKILRDVDVLSALAKLLPKGACAGKQAPPPVSNSTAPSTNA
STPATSLGNTTEAGGEAGATSGPETGATAEENPQSQFSAFVQLWAGLQPILCGNDRIIEP
EALKQGNMSSLGFTSKEQRNLGLLVHLMTTNPKILYAPNGTEVDKVIQKANETFAFVGNV
THYARLWRNMSAQLRTFLEEGKLQGRMQWLQEVTANLPRQSEPFNSSDSDALRRLIDSNF
TAPNSSTLLQQLDTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFA
SVIFQTNKDGSLPPHVQYKIRQNSSFTEKTNEIRRAYWRPGPNTGGRFYFLYGFVWIQDM
MERAIINMFVGHDVVEPGNYVQMFPYPCYTRDDFLFVIEHMMPLCMVISWVYSVAMMIQH
IVAEKEHRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLMHSDPFII
WLFLTVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAF
EKCIASLMSTTAFGLGSKYFALYEVAGVGIQWHTFSQSPVEGDDFNLLLSMVMLIIDATV
YGVLAWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRVEAWEWPWSRSTRLSIMEEDQACA
MEHRRTEENRGIEEEPSHLPLVVCIDKLTKVYKTGKKLALNKLSLNLHENQVVSFLGHNG
AGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDKIRKNLGMCPQHNVLFDKLSVEEHLWF
YSRLKGMAEEEIRKEMDKMIEDLELSNKRHCLVQTLSGGMKRKLSVAIAFVGGSRAVILD
EPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLF
LKSTYGDGYKLTVVKKQSDARVSDPERTVSPLSPSSLSPCSETRVTQFIRRFVASCYRVS
NTNTELSYVLPSEAVRKGCFERLFQALEENLDNLALTSFGLMDTTLEEVFLKVSDEDQSL
ENSDADMKESPQAVHPAVLSSGGKVLTAGEALPAGGLEKPEVELSNLMVCSQLSNSQGSL
RSTSSVGSVRGDEGGQYSEFYGDYCPLFDTTEDPDNVSLQAEPEVDAEGQGSFKLEGSWL
KLRQFHGLLIKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPSQY
HNYTQPKGNFIPYANEDRMEYRNKLSPDASPQQIMNTLRMPSGIGATCVLKTPFNSTLDQ
LAQTLNLNSNESKMLAAQYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDFPESSYEDGLRF
WNLTTEPTTVKEAVTSTPTLPHTVHEPIRCTCSMQGTGFSCPSGVGGRPPQMKVVTGDIL
VDITGRNVSEYLLYTSDRLRLHRYGALTFGNIQKSIPASFGMKTPPMVRKIAVRRASQVF
YNNKGYHSMPTYLNALNNAILRANLPKSKGNPAAYGITVTNHPMNRTSASLSLDYLLQGT
DVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVIYWLANYIWDMLNYLVP
ATCCVLILFVFDLPAYTSPTNFPAVISLFLLYGWSMTPIMYPASFWFEVPSTAYVFLIVI
NLFIGITATVATFLLQLFEHDKDLKLVNSYLKSCFLIFPNYNLGHGLMEMAYNEYINEYY
AKIGQFDKIKSPFEWDIVARSLVAMTVEGFVGFFITIMCQYNFMRRPQRLPVSNKPIEDD
DVDVACERRRVLRGDADNDVLKIENLTKVYKSRKMGRILAVDRLCVGIRPGECFGLLGVN
GAGKTTTFKMLTGDESTTGGEAFISKHSILRELLKVQQNIGYCPQFDALFEDLTAREHLK
LYTRLRGVPWKDEDRVVQWALDKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFL
DEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLAIMVNGRFKCLGSI
QHLKNRFGDGYMITVRTKSSLNVKEVVRFFSRNFPEAILKERHHTKVQYQLKSDFISLAQ
VFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKKQSDNLEQQEGSPPGTSQSPLKRVLNF
LRPRAANTELRALVVEEPEELESDDEGLISFEEERAQLSFNTDTLC
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctccatcagctgcaccttctgctctggaagaacgtgtctttgaagaggagg
agtccgtgggtgcttgcctttgagatcttcatcccactcgtcctcttcttcatcctcctt
gggctacggcagaagaagccgaccattcgagtgaaagaagtctccttctacacagctgct
ccactgacctcggccggcatcatccccatcatgcagtcgctctgtccagatggccagagg
gatgagtttggattcctgcagtacaagaattccacggtgacgcagcttctggaccgcatc
aatgaggtggtgcaggagagcaacctgtttgacccggaccgccccggactggtggaggag
ctcgaatcgctgcagcagcacctggagagcctgagcggcgaccccaactctctggagcgc
ccgtggaactcgagtcaagggttcaccttgggctcagttctgaaggaccaggccgacttc
cagcagtttctcaccaggaacctgtcgctgcccaacgagacggccgccgctctgttggcc
tccagcatcagcgtccaggaggtgtaccacctctttttcggcctgaccccaagttttgct
ccgttgggtggtcttaagaaaagaaacaccagggagggccgcagccctgcagagaaggtc
ctgccgcgggaggagtatcatctgggaggctggaggtacgccgagacggatttgatccac
aagctgctcagtaactcggagaaggccgtccaccggcaggctgcttggcgtctcctcagc
cagacccttggtctcaactcgacgtccagggccggtgatctacagagcctcaaggacatg
gagaatatcttgctgacttctggcacgctggagttgctgacgtgtgaagacaaggacgag
gaattccaacacatcctcctcacccccgagggtcagcagccacttctgcaggcgtatcgt
acgattctgtgcagcggaggtgccagccagcgggcacagcgcttctctggactggccaga
gaactgaagatgcagatcgatacgcaaagagtggccagcaagctcaggtttgaggaggtg
aactccacagccacccagaagcacctgagcgccctgctgcaggacctgaacgagatggcg
aagatcctccgtgatgtggacgtcctgtcagccctcgccaaactcctgccaaagggcgcc
tgtgccggaaagcaagcccctccgccagtctccaacagtacggcccccagcaccaacgcc
agcacgcctgcaacgagcctcggcaacacgactgaggcgggcggagaagcgggggctact
tcgggtcccgagacgggggccacagctgaggagaacccccagtcccagttctcagccttt
gtgcagctgtgggcaggtcttcagccaattctctgtggcaatgaccggatcatcgaaccc
gaggctctgaagcagggaaacatgagctccttgggattcacaagcaaagaacagaggaat
cttgggctcctggtccacctcatgaccaccaaccccaagatcctgtatgcgccaaatggc
accgaagtggacaaggtcattcaaaaggccaacgagacgtttgcgtttgtgggcaacgtc
actcactacgcccgactgtggaggaacatgtcagcccagctgcggaccttcctggaggaa
ggaaaacttcagggcagaatgcagtggctacaggaggtcaccgccaacttgccgagacag
agcgagccgttcaactcgtccgacagcgacgcgctccgccgcttgattgacagcaacttc
actgcgcccaacagcagcactctgctccagcagctggacaccatcgacaacgcggcctgc
ggttggatccagttcatgtccaaggtcagcgtggacatcttcaaaggcttccccgacgag
gagagcatcgtgaattacacgctgaaccaggcgtaccaggacaacgtgaccgtgtttgcc
agtgtcatcttccagaccaacaaagatggctccctccctcctcatgtgcaatacaagatc
cggcagaactccagcttcaccgagaaaaccaatgagatccggagggcttactggcgtcca
gggccaaacacggggggacgtttctactttctctatggttttgtgtggattcaagatatg
atggaacgggccataatcaacatgtttgtaggccacgacgtggtggagccaggaaactac
gtccagatgttcccgtatccgtgctacacccgtgacgattttctgtttgtgattgaacac
atgatgcccctctgcatggtgatctcctgggtctactctgtggccatgatgatccagcac
atcgtagctgagaaggagcatcggctgaaggaggtgatgaagatgatgggtcttaacaat
gctgtccactgggtggcctggttcatcacgggctttgtgcagctgtccatctcggtcact
gcgctcacggccattttgaaatatggcaaggtgctcatgcacagcgacccgttcatcatc
tggctcttcctcacagtgtatgccgtggcgaccatcatgttctgtttcctggtgtccgtt
ctttactcaaaagccaagctggcatcggcgtgtggtggcatcatctacttcctgagctac
gtgccatacatgtatgtggcaatccgagaggaggtggctcacgacaagatcactgccttt
gagaagtgcattgcgtctctgatgtccaccacggctttcggactgggatcgaaatacttt
gccctctatgaggtggcaggagtgggcatccagtggcacaccttcagtcagtcgcccgtt
gaaggggatgacttcaacctgctgctctccatggtgatgctcatcattgatgccaccgtc
tacggggtgctcgcctggtacatcgaagctgttcacccaggaatgtatggacttccgaga
ccctggtacttccccctgcagaagtcgtattggcttggcagtggccgtgtagaagcctgg
gagtggccgtggtctcgcagtaccaggctgagcattatggaggaggaccaggcctgtgcg
atggagcatcgacgtacggaggagaaccgtggcattgaagaagaaccgagccaccttcca
ctggtggtctgcattgataagctgaccaaggtctacaaaaccggcaagaagttggccctc
aacaagctcagcttaaatctgcacgagaaccaagtggtgtccttccttggccacaacgga
gcgggaaagacgaccaccatgtccatcctgaccggcctcttccctccaacatctggctct
gccaccatttacggccacgacatccgcaccgagatggacaaaatccgaaagaacctgggg
atgtgcccgcagcacaacgtcctgttcgacaagctcagtgtggaggagcacctgtggttc
tactcgaggctcaagggcatggcggaggaggagatccgcaaggagatggacaaaatgatc
gaagacctggagctgtccaataagcgccactgcctggttcagacgctctcaggcggcatg
aagaggaagctctccgtggccatcgcctttgtgggtgggtctcgtgcagtcatcctagat
gagcccacggctggcgtcgacccctatgcccgccgggccatctgggacctcattctgaag
tacaagcaaggacgcacgatcctcctgtccactcaccacatggatgaggcggacctcctc
ggcgaccgcatcgccatcatctctcacgggaagctcaagtgctgcggctccccgctcttc
ctcaaaagcacgtacggcgacggctacaagctgacggtggtgaagaagcagagtgacgcc
cgggtgtcagatcccgagcggacggtgtccccgctgtccccgtcctcgctcagcccctgc
tcggagacgcgggtgacgcagttcatcaggaggttcgtagcctcgtgttaccgggtgtcc
aacaccaacactgagctctcctacgtgctgccatcggaggccgtcaggaagggctgcttt
gagaggctgttccaggcgttagaggagaacctcgacaacctggccctgaccagctttggg
ctgatggacaccaccctggaggaggtcttcctgaaagtgtccgacgaagaccagtccctg
gagaacagtgacgctgacatgaaggaatccccccaagccgtccatcccgcagtgctctca
agtggaggcaaagtcctcacagcgggcgaggcgctcccggccggggggctggaaaagccg
gaagtggaactcagcaacctgatggtctgctcccagctcagcaactcccaggggtccctg
cgctccacctcctccgtggggtctgtacgcggggacgagggggggcagtactcggagttc
tatggggactactgccccttgtttgacacgacggaggaccccgacaacgtcagcctgcag
gctgaacccgaggtggatgctgagggccaagggtccttcaagctggagggatcctggctg
aagctgcgccagttccacggactcctcatcaaacgattccactgtgccaagcgcaacaca
aagggcatcttctctcagatcctgctgcctgccttctttgtatgtgtggccatgacggtg
gcactgtctgtgcccgaaatcggagacctgccacctctgatcctgtcaccctcgcagtac
cacaactacacacagcccaaaggaaatttcatcccctacgccaacgaagatcgcatggag
tacaggaacaagctgtccccggatgccagccctcagcaaattatgaacacattgcgcatg
ccctcgggcattggggcaacgtgtgttctcaaaacccccttcaacagcactctggaccag
ctggcacagaccctcaacctcaactccaatgaatccaagatgctggcagcccagtacttt
gactctatgtgtctcgactctttcacccagggtgtccccctgtcaaactttgtgccccca
cctccttcgccagcaccatccgacttcccagagtcaagctacgaggacggcctgcggttc
tggaatctgacgacagagccaactacagtcaaagaagcagtgacctccacacccacactg
ccccacaccgtccacgagccgatccgctgcacgtgttcaatgcagggcaccggcttctcg
tgccccagtggggttggtgggcggcccccccagatgaaggtggtcaccggcgacattctt
gtagacatcaccgggcgcaacgtgtcggagtacctgctgtacacgtcggaccgcctgcga
ctgcacagatatggagctttgacattcggcaacatccagaaatccattccggcgtcattt
gggatgaagactccacccatggtgaggaagattgccgtgcggagagcatcacaggttttc
tacaacaacaaggggtaccacagcatgcccacctacctgaatgccctgaacaatgccatc
ctgagagccaaccttcccaaaagcaaaggaaacccagcagcatatgggatcacagtcacc
aaccacccgatgaaccggacgagtgccagcctgtccctggactacctgctgcagggcacc
gatgtggtcattgccattttcatcatcgtggccatgtcctttgtcccagccagctttgtg
gtcttcctcgtggctgagaagtcgactaaagccaagcacctgcagttcgtcagcggctgt
gaccctgtcatctactggctggccaactacatctgggacatgctcaactacctggtccct
gccacctgctgtgtcctcattctcttcgtatttgatctgcccgcctacacgtcgcccacc
aacttccccgctgtgatttcactgtttctgctgtacggctggtccatgacacccatcatg
tacccggcgtctttctggtttgaggtgcccagcaccgcctacgtcttcctcatcgtcatt
aatctgtttattggcatcacggctacggtcgccaccttcttgctgcagctgtttgagcat
gacaaggatctcaagcttgtcaacagctacttgaagtcgtgctttttgatctttcccaac
tacaacttgggtcacggcctgatggagatggcgtacaacgagtacattaacgagtactat
gccaagataggccaattcgacaagatcaaatctccctttgagtgggacatcgtcgcccgc
agtctggtggcgatgaccgttgagggcttcgttggcttcttcatcaccatcatgtgccag
tacaacttcatgcggagaccccagcgcctgcccgtgtcaaacaagccgatcgaggacgat
gacgtggacgtcgcatgtgaacgccggcgagtcctacggggcgacgcagacaatgacgtg
ctcaagattgagaatctgactaaggtgtataaatccaggaagatgggtcgcatactggct
gtggaccgcctatgtgtgggtatccgccctggcgagtgcttcggtctgttaggagttaat
ggggctggcaaaaccaccaccttcaaaatgctgactggcgacgagagcacaaccgggggg
gaggccttcattagcaaacacagcattctgagggagctgctgaaggtccagcagaacatt
ggctactgcccccagtttgacgctctcttcgaggacctcactgcccgcgagcacctgaag
ctgtacaccaggctgcgaggtgtgccctggaaggacgaggaccgggtggtccagtgggct
ctggacaaactggagctgaccaagtatgcagacaagccagctgggacctacagtgggggg
aacaagaggaagctgtccaccgcgatcgcactcatcgggtacccctccctcatcttcctg
gatgagccaaccactggcatggaccccaaggcgcgacggttcttgtggaacctcattctg
gatatcatcaagacgggccgctcagtggtgctaacatctcacagcatggaggagtgtgag
gccctgtgcaccaggctggccatcatggtcaacgggcgtttcaagtgtctcgggagcatt
cagcacctgaagaacaggtttggagacggctacatgatcacagtccgcacgaagtccagt
ctcaacgtcaaggaggtggtgcgattctttagcaggaacttcccagaggcaattctgaag
gagaggcaccacaccaaagttcagtaccagctcaagtcggacttcatctccctggctcag
gtgttcagtaagatggagcaggtggtgggagtgctgggcatcgaagactactctgtgagc
caaaccaccctggataacgtgtttgtcaattttgccaagaagcagagtgataatctggag
cagcaggaaggttcgccacccgggaccagccagtcgcctctcaaacgcgtcctcaacttt
ctgcgcccacgggcagccaacacggagttgagggcactagtggtggaggagcccgaggag
ctggagagtgacgacgaggggctgatcagctttgaggaggagagggcccagctgtccttc
aacaccgacacgttgtgctga
DBGET
integrated database retrieval system
