Polypterus senegalus (gray bichir): 120541980
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Entry
120541980 CDS
T08668
Symbol
ap5z1
Name
(RefSeq) AP-5 complex subunit zeta-1 isoform X1
KO
K19025
AP-5 complex subunit zeta-1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120541980 (ap5z1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120541980 (ap5z1)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
120541980 (ap5z1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_AP5Z1_C
TPR_AP5Z1
SPG48
MSB2_C
Motif
Other DBs
NCBI-GeneID:
120541980
NCBI-ProteinID:
XP_039629959
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Position
13:135742078..135766891
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AA seq
815 aa
AA seq
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MFSAGAESLIKQAREIQEDELQKFYKRISKLLHCKDYGIETVDSLQRLYLILSATKYTRS
LPADILHPLQTLLCYSKSSEQLFTLSSAILRESTQYNLEDITLDDIQDSKTLSYLTTVIL
AQVGKRQDVSSLSQHVVRCLETRQPESNNSRCLLPILLKLISLSPESLNEDQINVVSKKL
VDWLRYASTQQGVPLSSGGFFTGTRTRQPVPITEVDGTVAADFFTVLCLGQSYTEDQWMN
MHAFSMIRKWLLSYTTEDNSSADSDDRSEIDGSVMSMVSATSTSSRLLPPKERLREKSFE
YCHRLIEQSDRKAMKRTDAELQKACLIEAVTVMDIICREDHSYVYRAFPCVKALYGRING
DLLFSRALLPIAQFYLNHSETAAVDSEALYRQLFENVPPELFHDSVFAFEFIQFCRTNVK
VLSERVNVFQLSFPNLLKFLAWNSSTLLPEFIDLLPFLITTDKAVEILHTLLDLPCLTAV
LDIQVRSNSLQASERIPLDQNSKVSSSMDAFRHPYYRGMFLYMLRSEAGTGDTIDRLNVL
HEVLMDMAEYPRIVQCAQVVPILLHVFFNVIAQSTDKMLINQLILVLLERSSLLFDVQNY
KTEVQRVFSSQFLVLCRLHPPLIVEQSKELLEFLGATGNIQNKENFFTYVVWAVGEYLSV
SYDRRCTVEQITLFFETLEAVLFEITQVRQCTGLHVHNPRVITVLMTTLAKLASRSQDLI
PRVSLCLSKMSTFAHKKAASSCYSEDDTEEIVARANELINLLKLPSVAQFVLAPSMDGIN
PQWHRDTSAALPLVMRTMSAVLQRESGFSPALCPD
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgctggggcagagagtttaatcaaacaggccagagaaatacaggaggatgag
ctgcaaaagttttataaaaggatatccaaactacttcactgcaaagattatggaattgaa
actgtggattcactgcagaggctgtatctcattctatcagcaacaaaatacactaggagt
ttgcctgcagatattcttcatccattgcagacactgctttgttactcaaagtccagtgaa
caattattcacactgtcttctgcaattttaagagagagcacccagtacaaccttgaggat
ataacactagatgacattcaagacagcaaaaccttgagttacttgactacagtgattctt
gcacaggttggtaaacggcaggatgtttcatcattgagtcagcatgttgttaggtgttta
gagactcgccagccagagagcaacaattctcgatgtttgctacctatcctgttgaagctc
atcagcctttcacctgagagcttaaatgaagatcagatcaacgtggtcagtaaaaagctt
gttgattggctgcgttatgccagtacacagcaaggtgtgccattgtcttcagggggtttc
tttaccggaacaagaacacgacagccagttccaatcacagaagttgatggaactgttgct
gctgatttctttactgtcctctgccttggccaaagctatacagaagaccaatggatgaat
atgcatgctttttctatgataagaaaatggcttctctcttatactacagaagacaatagt
agtgcagattcagatgacagatcagaaattgatggttctgtcatgtcgatggtttcagca
acttccacatcaagtcgtttacttcctcctaaagaacgtctgagagagaagtcttttgag
tattgtcatcgtctgatagagcaaagtgatagaaaagctatgaagagaacagatgcagag
ctccaaaaggcttgcctgatagaagctgttaccgtgatggatatcatttgtagggaggac
cattcatatgtataccgtgcctttccttgtgtgaaagctctgtatggaaggatcaatggt
gaccttttattctccagagcattgctgccaattgctcaattttatctaaatcacagtgag
acagcagctgttgattcagaagccctataccgacagctgtttgaaaatgtccctcctgaa
ttattccatgattctgtttttgcgtttgaattcatccagttctgcagaaccaatgttaag
gtgcttagtgaaagagtgaatgtattccagttaagctttcctaatctgttgaagtttctg
gcatggaacagtagcacgctcctccctgaatttattgatttacttccatttttgataact
actgataaggctgttgaaattctccacacattgctggaccttccttgcttaacagcagtt
cttgacatacaggtcaggtcaaattcattgcaagcctctgagaggattcccctggatcaa
aattccaaagtatccagctcaatggacgcattcagacatccatactataggggtatgttc
ctgtatatgctaagaagtgaagctggaactggagacacaattgacaggctgaatgtgctt
catgaggtgttaatggacatggctgaatacccaaggattgtgcagtgtgcacaagtagtt
cccatcctgcttcatgtgttttttaatgtcatagcacagagtacagacaagatgttgatc
aaccagctgattttagtgcttttggaaagaagtagtttgctttttgatgtacaaaactac
aagacagaagtgcagcgggtcttcagttctcagtttcttgttctgtgtaggctgcaccct
ccgttgattgtggagcagtctaaggagctcctggaatttctgggtgcaactggaaacatc
cagaacaaagagaactttttcacatatgtggtctgggctgtcggcgaatacctgtctgtc
tcttatgacagaaggtgcactgtggagcagattaccttgttctttgaaactttagaagct
gttctgtttgaaattacccaagtcaggcagtgcactggcttgcacgtacataatccccga
gtgattactgtgcttatgacaacgttagccaaacttgcttcacgaagtcaggacctcatc
ccaagagtttcattgtgcctctccaaaatgagcacatttgcacacaaaaaggcagcatct
tcatgttacagtgaggatgatacagaagagattgtcgctcgtgccaatgaactgatcaac
ctactgaagttgccaagtgtggctcagtttgtgctggcaccttccatggatgggattaat
ccacagtggcacagggatacaagtgcagctctgccactagtcatgcgcactatgagtgca
gtcctacagagggagtcgggcttttctcctgcattgtgtccagattaa
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