Polypterus senegalus (gray bichir): 120542001
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Entry
120542001 CDS
T08668
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04114
Oocyte meiosis
psex04120
Ubiquitin mediated proteolysis
psex04218
Cellular senescence
psex04310
Wnt signaling pathway
psex04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120542001
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120542001
04340 Hedgehog signaling pathway
120542001
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
120542001
04218 Cellular senescence
120542001
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psex04121
]
120542001
03036 Chromosome and associated proteins [BR:
psex03036
]
120542001
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
120542001
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120542001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_C
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-TrCP_D
EIF3I
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_EML
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
ANAPC4_WD40
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
Beta-prop_IP5PC_F
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
NBCH_WD40
WD40_like
Beta-prop_IFT140_1st
Beta-prop_HPS5
F-box
Beta-prop_WDR11_2nd
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_RFWD3
PEP5_VPS11_N
WD40_2
DUF1513
DUF4508
Motif
Other DBs
NCBI-GeneID:
120542001
NCBI-ProteinID:
XP_039630005
LinkDB
All DBs
Position
13:4428526..4452958
Genome browser
AA seq
595 aa
AA seq
DB search
MGAPTPPAQDVRVMTQRVSIFTASFGGNNNMDPDIEEKSLELMCSVPRSLWLGCSNLAES
MCALRCLQSMPSVRCLQNTSVMEAQNEDDSPKKTTVFQTTNGPSSVIVSRKRPSEGNYEK
EKDVCIKFFDQWSESDQVEFVEHLISRMCHYQHGHINSYLKPMLQRDFITALPAQGLDHI
AENILSFLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYL
FKNRTTEIPPNSYYRSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDD
KIISGLRDNSIKIWDKQTLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVNTGE
VLNTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDF
DDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE
CGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEH
SGRVFRLQFDEFQIISSSHDDTILIWDFLNVSPNIASNGQNEGRSPSRTYTYISR
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgccaaccccgcccgcgcaggacgtgcgcgtcatgacgcagcgggtttccatt
ttcactgcgagtttcgggggaaacaacaacatggatcctgacatcgaggagaagagcctg
gagctgatgtgttctgtgcccaggtctttgtggctaggctgctccaacctggcagagagc
atgtgcgcgctgaggtgcctgcagagcatgcccagtgtccggtgtctccagaatacgtca
gtaatggaagcgcagaatgaagatgactctcctaagaagaccaccgtgtttcagaccacc
aatgggccttcctcagtgatcgtgtctcgaaaacgcccctccgaaggaaattacgagaag
gagaaggacgtgtgcatcaagttttttgaccagtggtccgaatccgaccaagtggagttt
gtagagcacctcatatctcgcatgtgtcactatcagcatggtcacatcaactcgtacctg
aagcccatgttgcagagggacttcatcactgcccttccagcccagggcttggaccacata
gctgagaacatcctctctttcctcgacgcgcggtctctctgtgccgccgagctggtgtgt
aaggagtggcagcgtgtcatctctgaaggcatgctgtggaagaagctgatcgagcggatg
gtgcgcacagaccccctttggaagggcctttccgagaggcaccagtgggagaagtatctc
ttcaaaaacagaacgacggagatcccacccaactcctactacagatccctgtaccctaaa
attattcaggacattgagacaattgaggcaaactggcgctgtgggcggcataacttgcag
cgtattcagtgccgctccgaaaacagcaaaggcgtgtactgtctgcagtacgatgacgac
aagatcatcagtggtctgcgcgacaattctattaagatttgggacaagcaaacacttgaa
tgtctgaagatactcaccgggcatactggctcagtactttgcctacagtatgacgagagg
gtcattgtgacgggctcttctgactccactgtgcgcgtttgggatgtcaacaccggcgaa
gttctcaatacactaatccaccataatgaagctgttctgcatctacgcttctgtaacggg
ctgatggtaacctgctcaaaagatcgttcaatcgcggtttgggacatggcctctcctact
gatatcagcttgcgacgtgtcctagtaggccatcgtgctgccgtcaacgtggtggacttt
gacgacaaatacattgtttctgcatcgggggaccgcacgatcaaggtgtggagcacaagc
acgtgtgagtttgtgcgcacgctcaatggccacaagcggggcatcgcctgcctgcagtac
agagaccgcctagtggtcagcggctcatcggacaacacaatcaggctgtgggacatcgag
tgtggcgcctgcctgcgagtcctggagggccacgaggagctagtgaggtgtatccgcttc
gacaacaagcgcattgtcagcggggcctacgatggtaaaattaaagtttgggacttgcag
gcggcactggacccgagggcaccggcgagcacactgtgtctgcggactctggtggagcac
tcgggccgcgtcttcaggctccagtttgacgagttccagatcatcagcagctcccacgat
gacactatcctgatctgggacttcttgaacgtctcgcccaatatcgcctccaacggacag
aatgaaggacgctcgccctcccgcacctacacgtacatctctagataa
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