Polypterus senegalus (gray bichir): 120542053
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Entry
120542053 CDS
T08668
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120542053 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120542053 (gspt1)
03012 Translation factors [BR:
psex03012
]
120542053 (gspt1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120542053 (gspt1)
Translation factors [BR:
psex03012
]
Eukaryotic type
Release factors
120542053 (gspt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120542053
NCBI-ProteinID:
XP_039630100
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All DBs
Position
13:159431688..159490897
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AA seq
585 aa
AA seq
DB search
MDPRDTAPDSWEQEDEVEAPTDAQLQSAFTGLNVNAKPFVPNVHAAEFVPAFLQKGASEN
AESAAESPSQEQPVSCGGFDKVTSMEICDTSAPLENGEAEMTQEESWEQKEEPNEAEPGG
GPAGDRGPVEEAAQEMMEEEEEVSAPKVAIAPPDAPKKEHVNVVFIGHVDAGKSTIGGQI
MYLTGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHF
TILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKH
LIVLINKMDDPTVNWSIERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEPAD
CCPWYTGLPFIPHLDSLPNFNRSSDGPVRLPIVDKYKDMGTVILGKLESGSICKSQQLVM
MPNKHNVEVLSLLSDDVETEYAGPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFD
AQIVIIEHKSIICPGYNAVLHIHTCIEEVQIIALICLVDKKTGEKSKTRPRFVKQDQVCI
ARLKTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggacccgagagacactgccccggattcgtgggaacaggaggatgaggtggaggccccg
accgacgcacaacttcagtccgccttcaccggactcaacgtgaatgccaagcccttcgtc
cccaacgtccacgccgccgagtttgtgccggccttcctgcagaagggggcctccgagaac
gcagagagcgctgctgaatctccatcacaggaacaaccagtctcatgtggcggtttcgat
aaagtcaccagcatggaaatatgtgacacatctgcacctttggaaaatggtgaagcagaa
atgacacaagaagagtcatgggaacaaaaagaggagccaaatgaggcggaaccaggaggc
ggccctgcaggagacaggggacctgtggaagaagcagcacaagaaatgatggaggaggag
gaagaggtttctgcacccaaagtagccattgcaccaccagatgctcctaaaaaggaacac
gtgaatgtagtgttcattgggcatgttgatgctggaaaatcaacaattggaggacagatc
atgtatcttacaggaatggtagacaaacgaaccctggaaaaatatgaaagagaagcaaaa
gagaagaacagagaaacctggtacttgtcttgggctttggatacaaaccaggaggaaagg
gacaagggcaaaacagtagaggtgggaagagcatattttgaaacggaaaagaagcacttt
accattctggatgctcctggtcacaaaagctttgttccgaacatgattggtggcgcatca
caagctgacctagcagtattggttatctcagccaggaaaggggagtttgagacaggattt
gaaaaggggggccagacgcgagagcatgccatgttggcaaaaacagcaggcgtaaaacac
ctgatagtcctcatcaacaaaatggatgaccccactgtaaactggagcatagagaggtat
gaggagtgtaaagagaaattagtgccatttttaaagaaggtcggctttaatccaaaaaaa
gacattcattttatgccctgttcgggactgacaggggccaacctgaaggagcctgcagat
tgttgtccatggtatacaggattaccatttattccacatctggatagcttgccaaatttt
aacagatcaagtgatggaccagtcagactaccgatagtagacaagtacaaggatatggga
acggtaatccttggaaaactagagtctggatcaatctgtaaatcacagcaacttgtaatg
atgccaaacaagcataatgttgaggtcctgagcttgctgtcagatgatgtagagacggaa
tatgctggacctggagagaacctgaaactaaggctgaagggaattgaagaggaggagatc
ctgccaggatttattctctgtaatgcagagaacctttgtcattctggtcgcacttttgat
gcccagattgttatcatcgaacacaaatccattatctgtccaggttataatgcagtgctg
catatccatacctgtattgaagaagtccaaataatagccttaatctgccttgtagacaaa
aagacaggtgagaagagtaagacaagacctcgctttgtgaaacaagaccaagtttgcatc
gcccgcttaaagacggcgggaacaatctgccttgagacattcaaagactttccgcaaatg
ggtcgctttactttgcgggatgaaggcaagactattgccattggcaaggtgctgaagctg
gtaccagagaaggattag
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