Polypterus senegalus (gray bichir): 120542122
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Entry
120542122 CDS
T08668
Symbol
cxxc1a
Name
(RefSeq) CXXC-type zinc finger protein 1a
KO
K14960
COMPASS component SPP1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120542122 (cxxc1a)
03036 Chromosome and associated proteins [BR:
psex03036
]
120542122 (cxxc1a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
120542122 (cxxc1a)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
120542122 (cxxc1a)
COMPASS/SET1 complex (yeast)
120542122 (cxxc1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
Motif
Other DBs
NCBI-GeneID:
120542122
NCBI-ProteinID:
XP_039630223
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Position
13:70816311..70888740
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AA seq
579 aa
AA seq
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MDSEMSDLDQATGPESSMEGENGENAPVYCICRKPDINCFMIGCDNCNEWFHGDCINVTE
KMAKAIREWYCKKCQEMNPALEIKYRPKKSREREIDLEQMEEDRKARDTPDFKMEKRRGS
RSQVKRSARMCGECEPCRRTEDCAQCDFCKDMKKFGGPNKIRQKCRLRQCEVRARKMLRV
RDDEFMPMKEQDDSTQKDSNLSDDYDEQEMALYEQYREAGYEDHNMPCFSDDDDGPFLDS
VLRKRAVKVKHVKRREKKSEKKKEDYKYRRHKQKQKHRDKTKHSDRGDTKDSGGLRQCLG
PGCVEVARSNSKYCSEDCGMKLAANRIYEILPQRIQQWQQSPCIAEEQGKKLLERIRREQ
HQARMKLQEMERRFHELENIIIKAKQQAVQHDEEVNEGDSDDTDLQIFCVSCSHPVNPKV
ALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHSRDPK
VPADEVCGCPLVKDVFEPTGEFCRVSKRKCNKHYCWEKLRRAEVDLERVRVWYKLDELFE
QERNVRTAMTNRAGLLALMLHQTIQHDPLTTDLRTIKDR
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggacagcgaaatgtcagatctcgaccaagcaacagggcctgagagcagcatggagggt
gagaacggcgagaatgcacctgtttactgtatttgtcgtaagcctgacatcaactgcttt
atgatcggctgtgataactgcaacgaatggtttcatggagactgcatcaacgtcacagag
aaaatggccaaagccatcagggaatggtactgcaagaaatgtcaagaaatgaatccagct
ctggagattaagtatcgcccaaagaagtctcgtgagagagaaattgatctggagcagatg
gaggaggacagaaaggcgagagatactcctgattttaaaatggaaaaacgtcgtggatca
aggtcccaggtaaagcgatctgcaagaatgtgtggtgaatgtgagccatgtcggcgtact
gaagactgtgctcagtgtgacttctgtaaagatatgaagaagtttggaggtcctaataaa
atacgacaaaagtgtcgcttgagacagtgtgaggtccgcgctaggaaaatgttgcgtgta
agagatgatgagttcatgcctatgaaagagcaagatgactccacccaaaaagattctaat
ctatccgatgattatgatgaacaagaaatggctttgtatgaacaataccgtgaggctgga
tatgaggaccataacatgccgtgctttagtgatgatgatgatggacctttcttagattct
gtgcttcgcaagcgagctgttaaagtcaagcatgtcaaaagacgggaaaagaaatctgag
aaaaagaaagaagactacaaatatcgtcgtcataaacagaagcaaaaacacagagacaag
actaagcatagtgatcgaggtgacactaaggattcagggggcttgcgacaatgcttggga
cctggttgcgtggaagtggcacgctcaaactccaagtactgctctgaggactgtggcatg
aagctggctgccaatcgcatttatgaaattctgccccagcgaattcagcagtggcaacag
agcccgtgcattgcagaggaacagggaaaaaagcttttggaaagaatcagacgtgagcaa
catcaagcacgaatgaagttgcaagaaatggagcgacgcttccatgagcttgagaacatc
atcatcaaggccaaacaacaggctgtgcagcatgatgaggaagtgaatgaaggtgatagt
gatgacacagaccttcagatattctgtgtatcctgcagtcatccggtcaaccccaaggtg
gcactgcgacacatggaaagatgctatgccaagtatgagagccaaacatcttttggatct
atgtatccaactcggattgaaggggctacccgtcttttctgtgacgtctacaacccacag
agcaaaacttactgcaagcgccttcaagttttgtgtccagagcattcaagggacccaaag
gtaccagcagatgaagtgtgtggctgcccattggtcaaggatgtctttgagccaacagga
gaattttgccgtgtatccaaacgcaaatgtaataagcactactgctgggaaaagttaaga
cgggcagaagtggacctggagcgagtccgagtgtggtacaagctggatgagctttttgaa
caagagcgcaatgtcaggacagcaatgacaaatcgtgctggtttgctggcactaatgttg
catcagactattcagcacgatcccctgaccacagatctccgcaccatcaaagaccgctga
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