Polypterus senegalus (gray bichir): 120542137
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Entry
120542137 CDS
T08668
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120542137 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120542137 (exosc1)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
120542137 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
120542137 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
120542137
NCBI-ProteinID:
XP_039630254
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All DBs
Position
1:272855205..272878275
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AA seq
194 aa
AA seq
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MSPWKVCVPGERLCSTDVCKAGSGTYTRHSFIFASLAGYVVKKNEEEELPVISVVRETEA
QLLPDVNAIVTCKVTSINPRFAKVHILYVGSTPLKNKFRGTIRKEDVRATEKDKVEIYKC
FRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGVPMVPISWCEMQCPRTHAKE
FRKVARVQPEYLMP
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgtggaaggtgtgtgttcctggtgaaagattgtgtagcactgacgtctgtaaa
gctggaagtgggacctacactcgacacagctttatctttgcctctcttgcgggctatgtg
gtaaagaagaatgaggaagaagagctgccagtgatctcagtggtcagagaaacagaagcc
cagctattgcctgatgtaaatgcaatagtaacatgtaaggtgactagtattaacccacgg
tttgccaaagttcatatcctctatgttggctcaacccctttaaaaaataaattcagagga
acaataagaaaagaagatgtaagagctacagaaaaggacaaggtggagatttataaatgt
ttccgacctggggatattgtcctagcaaaagttatctccttaggtgatgtgcagtccaac
taccttcttacaacggcagagaatgagcttggggttgtggtggcacatagtgaggcaggt
gtgccaatggtgccaatcagctggtgtgaaatgcagtgtcctagaactcacgcaaaagag
tttcggaaagtggcacgggtacagcctgaatacttaatgccataa
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integrated database retrieval system