Polypterus senegalus (gray bichir): 120542146
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Entry
120542146 CDS
T08668
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120542146 (mms19)
03400 DNA repair and recombination proteins [BR:
psex03400
]
120542146 (mms19)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120542146 (mms19)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120542146 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
Adaptin_N
API5
Motif
Other DBs
NCBI-GeneID:
120542146
NCBI-ProteinID:
XP_039630266
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All DBs
Position
1:complement(272904426..273004173)
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AA seq
1040 aa
AA seq
DB search
MCDLRSKAPRMHAMAGDGLELLSLVEEFVVGQQDSKAEDIATGVTTGQFTILKLVEGLGS
ALTSCEPRTRGRGVQLLSSVIQQCYANLQEEEVQVLTKFYENRLKDHYIITPHVLQGLKS
LTMSTALPSGLAVSILGSLFQDIHVQSLMQAERFCVYSILLNLMDSCEEELKGLGANFVF
GFIQAVDGEKDPRNLLLSFQIAQNIINRKYELGTFTEELFEVTSCYFPIDFNPPPNDPHG
ITQKDLVLSLRAVLSGTPQFAEFLLPLLIEKLDSDIQSAKLDALQTLTACVASYGHKELK
EFLPSLWSSIRREVFQTASEKVESAGLSALHGLTACLSRSVLTCDSEDSLETFLNLIVKD
CQHHLCEPDLKLVWPSAKLLQAAASSSFRASCTISRVVVPLLLEQYNNHVQSTQRRTLLE
VLQKFIHSAKRSPVEEGGESSLAEYRQSLCSVVFCALSDSSSALQTSGLRTLMAIGNHPG
LLFGTDIELAVDHLSKFILEDVDHETSLVAMEASGSLACLHTTAFCSRMVPALKEKIISD
CLGGSGETPPAKSQQALFLRIVRALAAISTHPNLVRETVPILLQVLSASHTGNVQIRQED
VVSVCQNLQCIVELAQGSEESACYFHETVIPYVLGLSLQAAFHKERTLSPLRDEKVLSAL
VPVFSAASGCSQHMLAAQTASQILMLFLVGDATFLPENNVPQNVNLLKSYSDNSAQTQLV
CLLMGCVCSLPINVELPMLDQLLTELEELSCTCPHPFTYTSAAKCFAGLVNKYPSGQKLD
QLLENTLTRIDTILTSTEPSGSSNQKQAFTFLLWLTKALLLRYHPLSAPLTDKLLCLLVD
PSLGTLAADGFALLMNDPPDVLNKACHADVRMMYRQRFFTETAPKLVQGFNSSPKEMKSS
YLKALSHILNCLPKQVLISELPSLLPLLLEGVSCPDSEVQFSTLSCLHPLLLDTPQVLTL
HLETLITKLLGLTSSAAMKIRIMSLRCLHALTQLPLHVILPFRSKTLRALAVPLDDKKRL
VRKEAVLARGEWFLLGGPGK
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgacttgcgcagtaaggcgccaaggatgcacgcaatggctggagacgggttagag
ttgctgagcctagtggaggaatttgttgtcggccagcaggacagtaaagccgaggatata
gccacaggagtaaccactgggcagtttactatattgaagctggtggaaggacttggctct
gcattaacaagttgtgaacctcgtaccagaggccgaggtgttcagttgctgtctagtgtg
attcagcaatgttatgctaatctacaggaggaagaagttcaagttcttacaaaattttat
gagaacaggttaaaagatcattatatcatcacaccacatgttttacaagggcttaagtct
ttgacaatgtccacagcattgccttctggccttgcagtctccattctgggatctctgttt
caagatatccatgtacagtcactgatgcaggccgaacgtttctgtgtttatagcatctta
ctcaacttaatggattcttgtgaagaagagctaaagggtcttggtgccaattttgtgttt
ggctttatccaggcagtggatggagagaaggaccctcgaaatcttttgctgtctttccaa
atagcacaaaatattatcaacaggaaatatgagctaggaacatttactgaggagcttttt
gaagtgacatcctgctattttcctattgactttaacccacctcctaatgatccccatgga
attacacagaaagatcttgttttgagtttaagagcagttttatctggcactcctcagttt
gcagaatttttgctgcctctactgattgagaaacttgattcagatattcagagtgccaag
cttgatgctcttcaaacattgactgcatgtgttgcaagctatggacataaggagcttaag
gaatttcttcctagtctatggtcatcaatccgcagagaggtattccagacagcgagtgag
aaagtagaaagtgctggactgtctgccctacatggccttactgcctgcctttctcggtct
gtccttacttgtgactctgaagattctcttgagacgtttcttaatttaattgtaaaagat
tgtcagcaccacctgtgtgagccagacctaaaattggtttggcctagtgctaagctcctt
caagcagctgctagttcctctttcagagcaagttgtacaattagcagagtggtagttcct
ttacttctagagcagtacaacaaccatgttcagagcacacagcgacgtactcttttggag
gtgttgcagaagttcatccattcagcaaaaaggagccctgtggaagagggtggtgaaagt
tccctagctgaatatcgtcagtctctttgctctgtagtattctgtgctctttcagactcc
agctcagctttgcagacttcggggcttaggacattaatggctattgggaaccatcctggc
ttgctgtttggcacagatattgagttggcggttgatcacttgagcaagttcattctggag
gatgttgaccatgaaaccagtttagtagcaatggaagcctctggatctttagcttgccta
catactactgcattttgctccaggatggtcccagccttaaaggagaagattatttctgat
tgtctaggtggtagtggggaaacgccacctgcaaaatctcaacaagctttatttctgcgt
attgtaagagctctagcagcaatatcaactcatcccaaccttgtccgggagacagtacca
attctattacaagtcttaagtgcctctcacacagggaatgttcaaatccggcaggaggat
gtagtttctgtttgccaaaacctgcagtgtattgtggaacttgctcaaggcagtgaggag
agtgcatgttatttccatgaaactgtcatcccatatgtgttaggactttcattacaggca
gcgttccacaaagaaaggacattgagccccttaagagacgaaaaagttctgtctgccctt
gtcccagtttttagtgctgccagtggatgctcacaacacatgttagctgctcaaactgct
agtcagattttgatgctctttctagttggtgatgcaacatttttgccagaaaataatgtc
ccccaaaatgttaacctgctgaagagctattctgataacagtgcgcagactcagctagtc
tgtcttctaatgggttgtgtttgttcattgcctattaatgtggaactgcccatgcttgac
cagctcctaactgaattagaagagttgagctgtacatgtcctcatccttttacttacaca
tcggctgcaaaatgctttgctggattggtaaacaaatatccttcaggacagaagctggac
caacttttggagaatacattaacaaggattgacactattttgactagcacagaaccttca
ggttcctcaaaccaaaaacaggcttttacctttctgctatggttgacaaaggcccttctt
cttaggtaccatccactctcagcaccactgactgacaagctgctctgtctgttggtggac
ccttctcttggcaccttggcagcagatggctttgccttattaatgaatgatcctcctgac
gttctgaataaagcttgtcatgctgatgtacgaatgatgtaccgccagaggttctttact
gagacagcacctaagctggttcagggatttaactcatcccctaaagaaatgaaatccagc
tacctgaaggccctgtctcacatcctaaattgcctacccaagcaggttctgattagtgag
cttccctcactactcccactcctgctggagggtgtttcctgtccagatagtgaagttcaa
ttttccacattatcctgcctgcatccgctcctcctcgatacaccacaagttttaacatta
catctggagaccctcatcaccaaactacttgggctaaccagtagtgcagcaatgaagatt
cgaataatgtcactgagatgtctacacgcattgacacagcttcccctgcatgttatcctg
ccatttcgctcaaaaacgctgcgtgcattggctgtgccacttgatgacaagaagagactg
gtacggaaagaggcagtactggcaagaggagagtggttcctgcttggaggtcctgggaag
tga
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