Polypterus senegalus (gray bichir): 120542167
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Entry
120542167 CDS
T08668
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120542167 (rrp12)
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
90S particles
Other 90S particles
120542167 (rrp12)
Pre-60S particles
Other pre-60S particles
120542167 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
120542167
NCBI-ProteinID:
XP_039630346
LinkDB
All DBs
Position
1:273061545..273111963
Genome browser
AA seq
1284 aa
AA seq
DB search
MVKSGKLRSGTAQKLKRWKKGHSSDSNPESRRHREAAKSRFFSPAVKSGLTVDALKLHNE
LQSDQLAHTENKDGEASPMDETGQTERTTGTFLSGLSDCSNITFHKVQRFWESNSASHKE
ICAVLAAVTDVIRSQGGKETETEYFAALMTTLEVVDSGESMAAVAFLLNLVLKRVPSSVL
IKKFSDTSKVFMNIMSSNASLESPLGLRLILSCLSTLLKKQDASVWSYASTLQVYHGLLS
FTVHSKPKVRKMAQQGVCSVLKGGDLMFGDSPPSHHPAAQSTAKFCIKEMERAGKSQENT
TTLHIMELLKELLPCFPVSSVKSCCEMLLRVMTLNNVLVTAGAMQAFHRLFSAKPKPSTL
SSELNAQIITALYDYLPSENDLQPMLAWLTVMEKAHIHLSSIQKNLCLGHLPRLFSTAMN
CFLSPHTEVVSTAAQILKTLLKECVSSYMEETDTITSSSTSGSSTYIYKMFRQVEEGLTY
RFHSSWCYVLHVLSVFYQVAGKKANAIMLKSLQSLCDLRATPRFPFSGELDQAVGSAVES
MGPEIVLKAIPLQITDTEDLEFPRSWLIPVIRDHVKNTELGFFTRYFLPLATTLKSKADE
FSAAGQMLQSKVYNTLQMQIWTLLPGFCLYPTDLTTSFKGIARVLGMALSERPDLRPVIC
QAIRTLIKKSCDKEESQAEVGRFAKNFLPILFNVYTKNPEDGDCPTTRMCVLDTIKVYLA
VTEQQMICSFLQKASEKLSEAENTEFQRLTVMDLIAAMAPFVDEPSLSKAFHLVKPYLES
KQSNCQKKAYRVLEEISGGETLSCQSFIKTNFDVLKQTLLESLKSASSPAKRPRLKCLAH
IVRHLNQEHSDFIKALLPEVIVCTKEVSVGARQSAYMLLVEIGKAYMRFHSNAKDALNNY
LEMIYIGLTGSVTMISCTILALTRLVYEFKDFMEISVVEQLLENVCLLLSSKTREVVKAA
LSFIKVILFVLDIKILTSHVSVLMEGLGSIKDDIRWNLRTKLKNIFTKLMRKFGFDLVKS
MLPVQCHKVLINIRKAEARNKKRKMLKKMAESDSEEETTKNKSNSIEDILAESEPEDEED
VKHARVSKKQSRHKGQAWLKEGEGDEPLNFLDPKVSQRVLATNPDVKKTPKASHGFKVAS
DGRLIISNDDDDEEEKSEGKQEGINDVLEEVGVKSKKNLKRKFQEGNFDDDMEVESQNKY
KAGGSGIHRNVSKVEKFGGEYKSKKGKGDIKKKGKHDPYAYVPLKKTQLNRRKRAKLQGQ
FKGLIRGAQKGAKTGKKMQKKRKV
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaatcaggaaagctacgttcggggacggctcagaagctgaaacgctggaagaaa
gggcacagcagcgattccaatcctgaatcccgacgccacagagaggcagctaaaagtcgg
ttcttcagtcccgcagtgaaaagtgggctaacagttgatgccctcaaattgcataatgaa
ctacaatcagatcagttggcacacacagaaaataaggatggagaagcttctccgatggat
gaaactgggcagacggaacgcacaactggtaccttcttgagtggactgtcagattgttct
aatataacatttcataaagtgcagcgattctgggagtccaattctgcatctcacaaagag
atatgtgcagtactggcagctgtcactgatgttattcgttcccaaggaggaaaggaaaca
gaaactgaatactttgcggccctgatgaccacactagaagttgtggattctggtgagagt
atggctgctgttgctttcctcttaaacctagtgcttaagcgtgttccaagctcagtcctt
atcaaaaagttttctgatacatcaaaagtcttcatgaacataatgtcttctaatgcaagt
ttggaatccccattaggacttagattgatcttatcctgtctcagtacattactaaagaag
caggacgcttctgtttggagttatgcttcaacactgcaggtctatcatgggttgcttagc
tttactgttcactccaagcccaaggtacgtaaaatggcacagcagggtgtttgctcagtc
cttaaaggtggtgacttaatgtttggagattcccctccgtcacatcatccggcagctcaa
tcaactgctaaattctgtataaaagagatggaacgagctggaaaaagtcaagaaaacacc
acaactctgcacattatggagctcttgaaagagttgttgccttgtttccctgttagctct
gtaaagtcttgttgtgagatgctactgcgagttatgactttaaacaatgtgcttgtgact
gccggagcaatgcaggcctttcacaggcttttttctgctaaaccaaaaccatcaacactt
tcatctgaactcaatgcacagataattacagctttgtatgattaccttcccagtgaaaat
gaccttcagccaatgttagcctggctgacagttatggaaaaagctcacattcatctttcc
agcatccagaagaatctgtgtttggggcatttaccacgtctgttctctactgcaatgaac
tgctttttatctccacatacagaagtagtttcaacagcagcccagatattaaagacatta
ctgaaggaatgtgtttcaagctacatggaagagactgataccataacctcttcctctacc
tcaggttcaagcacctacatttataaaatgtttcgacaagttgaagagggcctaacgtat
cgattccattcttcctggtgctatgttctgcatgttctcagtgttttttatcaagtggca
ggaaaaaaagctaatgcaattatgttgaaaagcttacagtcattatgtgacctgcgggcc
actcctcggtttcccttttctggtgagctggatcaagctgttggctccgcagtagagagt
atgggcccagaaatagttctgaaagccattcctttgcaaattacagacacagaagatctt
gaattcccgcggagctggttaattcctgtaatccgagatcatgttaaaaatacagagctt
ggatttttcaccagatactttttgcctcttgcaactacactgaaaagcaaagcggatgag
tttagtgcagctggacaaatgttgcagtcaaaagtttacaacactttacagatgcagatt
tggactctgttacctggattttgtctgtacccaactgatttgaccacttcctttaaggga
attgcccgtgtattaggtatggctctcagtgaaaggcctgatctgcggcctgttatctgt
caagctattcgaacactgatcaaaaagagctgtgataaagaggaaagccaagcagaagta
gggcgctttgccaagaatttcctgcccatattgtttaatgtttatacaaaaaatccagaa
gatggagattgccctacaacgaggatgtgtgtactggacacaattaaagtgtaccttgca
gttacagaacagcagatgatttgttccttcctacaaaaagcatctgaaaaactaagcgag
gctgaaaacacagagtttcaacggttaactgtgatggatcttatagcagcaatggctcca
tttgttgatgaaccttcattaagtaaagcattccatcttgttaagccctatctggagagt
aagcagtcaaactgtcagaagaaggcttatcgtgtgctggaagaaatatctggaggggaa
actttgtcatgtcagagttttattaagacaaactttgatgtgctgaagcaaactcttttg
gaatctctgaaatctgcttcttcacctgcaaaaagaccaaggttaaagtgcctggcccat
attgtaagacatctgaatcaggaacattcagatttcatcaaagctcttctgccagaggtt
attgtatgcactaaggaagtgtctgtgggtgcacgtcaaagtgcatacatgctactagtg
gaaattggtaaagcgtacatgagattccacagcaatgcaaaagatgctttgaacaactat
ctggaaatgatctacataggactcacaggctcagtcacaatgatcagctgtacgatactg
gctctaacacgtcttgtctatgagttcaaagacttcatggagatttctgtggtagagcag
ctactagagaatgtatgtctcctcctctcctctaaaacaagagaagtggttaaagcagca
ctgtctttcatcaaagttattttattcgtcttggacataaagattttgaccagtcatgtg
tcagtattgatggagggtcttggaagcatcaaagatgatatccggtggaatttaagaaca
aagctgaaaaatatcttcactaaattaatgcgtaagtttgggtttgatctagtaaaaagt
atgcttccagtacaatgccacaaagtgcttatcaatattcgcaaagcagaagcaagaaac
aagaaacgcaaaatgttgaaaaagatggctgaatcagattctgaggaagaaactacaaaa
aacaagagcaacagcattgaagacatattggctgaatcagaaccagaggatgaagaagat
gtcaagcacgctcgagtttcaaagaaacagagccgacataaaggacaagcatggctgaag
gagggagaaggagatgaacctctaaacttcttagatcccaaagtttcgcagagagtatta
gcaacaaatcctgatgtgaaaaaaaccccaaaagccagccatggcttcaaagtagcttca
gatgggcgattgattattagtaatgatgatgatgatgaggaagagaaatcagaagggaaa
caagaaggaataaatgatgttttggaagaagttggtgttaaaagtaagaaaaatttaaaa
cgtaaatttcaagaaggcaactttgatgatgatatggaagttgagtcacaaaataaatat
aaagctggcggttctgggattcatagaaacgtgtctaaagtggaaaaatttggtggtgaa
tacaagtcaaagaaaggtaaaggtgatataaagaaaaaaggaaaacatgatccatatgca
tatgtcccactgaaaaagactcagctaaaccgaaggaaaagagcaaagttacaagggcaa
ttcaaaggattgattagaggagcacagaaaggagcaaaaactggaaagaaaatgcagaag
aaacggaaagtttaa
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