Polypterus senegalus (gray bichir): 120542246
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Entry
120542246 CDS
T08668
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
psex04517
IgSF CAM signaling
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120542246 (arpc1a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120542246 (arpc1a)
09144 Cellular community - eukaryotes
04530 Tight junction
120542246 (arpc1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120542246 (arpc1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120542246 (arpc1a)
05100 Bacterial invasion of epithelial cells
120542246 (arpc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542246 (arpc1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120542246 (arpc1a)
Membrane trafficking [BR:
psex04131
]
Others
Actin-binding proteins
Arp2/3 complex
120542246 (arpc1a)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120542246 (arpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_IFT140_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_Gbeta
Beta-prop_TEP1_2nd
Rax2
EIF3I
RMC1_N
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_IFT122_1st
Tricorn_2nd
Motif
Other DBs
NCBI-GeneID:
120542246
NCBI-ProteinID:
XP_039630488
LinkDB
All DBs
Position
13:143024062..143042954
Genome browser
AA seq
370 aa
AA seq
DB search
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWIKTHDLKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGIWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
AATPWGSKMSFGQVMAEFGGAGSGGWVHSVSFSVSGNRLAWVSHDSTVSVVDAPKSMMIS
QLKTEFLPLLSVIFISENSIVAAGHDCCPILFNCDDRGTLTFVSKLDIPKQNIQRNISAM
ERFRNMDKRATTEDRNTALETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacatcagtttctgttggaaccaatcacatgccatgcctggaaccgtgacaga
acacagattgcaattagtcccaataatcatgaagttcatatctataagaaaagtggtaac
cagtggatcaaaactcatgatcttaaggaacacaatggacacatcacaggaatagattgg
gctccaaaaagcgaccgcattgtaacttgtggtgcagatcgcaatgcctatgtttggagc
caaaaggatgggatatggaagccgactctggtgatactgagaataaaccgtgcagccacc
tttgtgaaatggtctcctttagagaataagttcgcagttgggagcggagcacggctaatt
tcagtatgttattttgagtcggagaatgattggtgggtcagcaaacatatcaaaaaacct
atacgctccacagttctgagtctagattggcaccctaacaacgttttgcttgctgcagga
tcctgtgactttaagtgccgagtcttttcagcatacattaaggaagtggatgagaagcct
gctgctactccttggggatctaagatgtcttttggtcaagtaatggcagaatttggaggt
gcgggaagtggaggatgggtgcacagcgtcagtttctcagttagtggaaaccgtctggca
tgggttagccacgacagcacagtgtctgttgtagatgcccccaaaagcatgatgatttcc
caattgaagactgaatttcttcccttgctgagtgtcattttcatctctgagaacagcatt
gtggcagctggccatgactgctgtccaatattgttcaactgtgatgatcgtggaaccctg
actttcgtctccaaattagacattccaaagcagaacattcaacgcaatatctctgctatg
gagcgcttccgcaatatggacaagagagccaccacagaggaccgcaacactgccttggag
acactgcatcaaaacagcatcacccaagtgtctatatatgaaggagataaaagagattgt
cgtaaattctgcactactggaattgacggtgcaatgaccatatgggatttcaagactctg
gagtcctctatccaaggtctgcggattatgtga
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integrated database retrieval system
