Polypterus senegalus (gray bichir): 120542265
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Entry
120542265 CDS
T08668
Symbol
grin2aa
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2A
KO
K05209
glutamate receptor ionotropic, NMDA 2A
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04020
Calcium signaling pathway
psex04080
Neuroactive ligand-receptor interaction
psex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120542265 (grin2aa)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120542265 (grin2aa)
04082 Neuroactive ligand signaling
120542265 (grin2aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120542265 (grin2aa)
Ion channels [BR:
psex04040
]
Ligand-gated channels
Glutamate (ionotropic)
120542265 (grin2aa)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NMDAR2_C
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
120542265
NCBI-ProteinID:
XP_039630520
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Position
13:143551530..143903284
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AA seq
1474 aa
AA seq
DB search
MWKRNVGMKPTIMSHLGLLLSMLPALIFQFPLVGGAEKNYPILNIAVILGRTRYITERDI
RALWNKEMAPDVNLDVNVVTILVNQTDPKSIITHVCDLMSGTKIHGVVFGDDTDQEAVAQ
ILDFISSQTSIPILGIHGGSSMIMADKDQMSTFFQFGASIQQEALLMLNIMEEYDWHVFS
IVTSKFPGYQDFISILKSTVENSFVGWDLQNTITLEAVAGDTKTQIQLKKIQSSVILLYC
SKDEAMYILEEARSLGLTGFGYIWIVPSLTTGNTEITPDEFPCGMISVSYDDWDYTLEAR
VRDGLGIITTAASAMMDQYGFIPEAKTNCYGQQEKNDMPPNRLHKFMMNVTWDGRDLSFT
EDGYQANPKLVVVVLNKDREWEKVGRWENQSLTLRYPVWPRFNSFGDTETDDNHLSIVTL
EEAPFVIVENVDSLTGTCMRNSVPCRKHVKLDNTTGEGTYIKKCCKGFCIDILKKIAKAV
KFTYDLYLVTNGKHGKKINNVWNGMVGEVVYKRAVMAVGSLTINEERSEVIDFSVPFVET
GISVMVSRSNGTVSPSAFLEPFSASVWVMMFVMLLIVTAMAVFIFEYLSPLGFNRNLAQG
KDPHGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAA
FMIQEEFVDQVTGLSDKKFQRPYDYSPPFRFGTVPNGSTERNIRNNYPDMHQYMVKYNQK
GVQDALVSLKTGKLDAFIYDAAVLNYMAGRDEGCKLVTIGSGYIFATTGYGIALQKGSSW
KRQVDLALLGLVGDGEMEELEAQWLTGICHNEKNEVMSSQLDIDNMAGVFYMLAAAMALS
LITFIWEHLFYWRLRYCFTGVCSGTPGLLFTISRGIWSCIHGVHIEEKKRSSDLDFSSPQ
ANMLKLIKQAKNMTNMSNLNPSRINSPKGPTDYIHGGSLIMDMVGDKGNFIYADNRGYPP
KDTMFGDAASDLQTFISNRHKDNLNNYVFQGQHPLTLNETNPNTVEVAVSADSTQNNART
RQLWKKSMETLRQSQGSIPDSVACEQRHSGKNQRYLPEDGAHSDVSECSSRATSYRDAEN
NQKHHKPKENLRKRSMNSKYPRDCSEVELSYLKNKQGCVGREKIYTIESEREHGLHAEQH
HFRENRPLPEDLEYPELYQDHNDNYRKAEPVIHLNSSPLQNEEVIPNNENKYSLYSKHYS
LKEKNVSPQETNDRCKQTHCRSCLSKVPNYTGHFGVRSPYNRCEACVHTGNLYDISEDQM
LQEVVSPMHHDEAYGQHWPQNDGPHVHRRNKLRLSRQHSFDNILDNSRDRETDLGRPARS
VSLKEKDRFLEDTSYANMFNIRNDKLLGGKTTLFNHNLEESKRSKSLYPDHSSENPFLQS
FREDQRLVHGRSSSDIYRQTAPPKSRNDNNLRSSVKSTSSYCSRDGRLPSDMYISEHVMP
YVANKTSVYSTPRVLNSCSNRRVYKKMPSIESDV
NT seq
4425 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaaagaaatgtcgggatgaagccaaccatcatgagccacttggggttgctgctt
tccatgcttccagcccttatatttcaatttccccttgttggtggagccgagaagaactac
cccatcttgaacattgccgttattttaggcaggacacgttatatcacagagagagatatt
cgggcattgtggaacaaggagatggccccagatgtgaaccttgatgtaaatgtggtgacg
atactagtgaaccaaactgacccaaaaagtatcataactcatgtatgtgacttgatgtct
gggacaaaaattcatggggtggtttttggagatgacacagatcaggaagcagttgcccaa
attttggattttatttcatctcagacttccatacctattttgggaatccatggtgggtct
tccatgatcatggcagataaggatcagatgtccacgttcttccagtttggagcttccatt
cagcaagaggccctcctgatgttaaatatcatggaggaatatgactggcatgttttttcc
attgtgactagcaaatttccgggctaccaggattttattagtatcctaaaaagcactgta
gaaaacagctttgtgggatgggatttacagaacaccatcacgctggaggcggtggccgga
gatacaaaaactcagattcagctcaagaagatccagtcgtctgtgatcctgttgtactgt
tccaaggatgaggccatgtacattctggaggaagcacgctcacttggcttaactgggttt
ggttatatctggattgtccctagcttgacgacaggcaacactgaaatcaccccggatgag
ttcccgtgtggaatgatttctgtttcttatgacgactgggactacacgctggaggcccga
gtcagagatggccttggaattataactactgctgcctctgccatgatggatcaatatggc
ttcattccagaggcaaaaacaaattgctatgggcagcaagaaaaaaatgacatgcctccc
aatagactgcacaaatttatgatgaacgtgacttgggatggccgagacttgtccttcact
gaagatgggtatcaagcaaaccccaagctggtggtggtagttttgaacaaggacagggag
tgggaaaaggtagggagatgggaaaaccaaagtctgaccctgagatatccggtctggcct
cggtttaattcattcggagacacggagacggatgataaccatctaagcattgtcaccctg
gaggaggccccctttgtaattgtggagaatgtggacagcttaactggaacgtgtatgaga
aactcagtgccctgccggaagcacgtcaaactagataacacaacaggagaagggacctac
attaagaaatgctgcaagggattctgcatcgacatcctcaagaagattgctaaagctgtg
aagttcacttatgatctttacctggtaaccaatgggaagcatgggaaaaagatcaacaat
gtatggaatggaatggtgggagaggtggtgtacaaaagagcagttatggctgtcggctcc
ttaacaattaatgaagaacgttctgaggtcatcgatttctctgttccctttgttgagacg
gggataagtgtcatggtttcaagaagtaatggaacagtatctccatcagctttcttagag
cccttcagcgcatctgtgtgggtgatgatgttcgtgatgctcctcattgtgaccgccatg
gccgttttcatctttgaatacctcagccccctgggattcaacagaaatctagcacaagga
aaagatccccatggaccatcattcaccattggaaaagctgtatggttactttggggcctg
gtcttcaacaactctgttccagtacagaaccccaaagggacaaccagcaaaataatggtt
tctgtgtgggctttttttgctgtgatcttcctagccagttacactgccaatctggcagct
ttcatgattcaggaagaatttgtcgatcaagtgactggactcagtgacaaaaagtttcag
agaccctatgattactcaccaccttttcgttttggcaccgtcccaaatggaagtacagaa
aggaatataagaaacaattaccccgatatgcatcagtatatggtgaagtacaaccaaaaa
ggagtacaggatgcccttgttagccttaagactgggaagctggatgctttcatatatgat
gctgcagttttaaattacatggcagggagagacgagggctgtaagctggtcaccattggc
agcggctacatatttgccacgacaggctatgggatagcactgcagaagggttcttcctgg
aaacggcaagtggatctggctttgctgggccttgttggcgatggtgaaatggaggagctg
gaagcgcagtggttgactggaatttgtcacaatgaaaagaacgaagtgatgagcagccag
ctagatatcgacaacatggcgggcgttttctacatgttggcagcagccatggctctcagc
cttatcaccttcatttgggagcatctgttttactggcgactccgttactgcttcacgggg
gtctgcagtggaacgcctggactgctattcacaataagcaggggcatatggagctgtatc
catggtgtgcacattgaagaaaagaaaaggtcttccgatttggactttagcagtccacag
gctaatatgctaaaactgattaagcaagccaaaaacatgaccaacatgtctaatttgaat
ccttcacggatcaattccccaaaaggacctacagactatatacacggagggtctttgata
atggatatggtgggagacaaaggaaattttatctatgctgacaaccgaggttacccccca
aaggacaccatgtttggtgatgctgcaagtgatttacagacatttataagtaatcggcac
aaggacaatttaaacaactatgtcttccaaggtcagcatcctctcacgctgaatgaaacc
aacccaaatacggttgaagttgctgtcagcgcagacagcacccagaataatgccagaacg
cggcaactttggaagaaatccatggaaacactccggcaaagccaagggtctattcctgat
tcagtcgcttgtgagcagcgacattctggcaagaatcagcgatatcttccagaagatggg
gcccattcagatgtatccgaatgctcaagcagggctacttcctacagggatgcagagaat
aaccaaaaacatcacaagccgaaggagaatttgcgaaaaaggtcaatgaattcaaagtat
ccccgtgactgtagtgaagtagagctgtcatatctgaaaaacaaacaaggatgtgtgggg
cgtgaaaagatatacaccattgagtccgagagggagcatggattacatgccgagcaacac
catttcagggaaaacaggcctcttccagaagacttagagtatcctgaactttatcaggac
cataatgacaattacaggaaagcagagcctgtaatccatctcaatagcagcccgttacaa
aatgaagaagttattcctaacaatgaaaacaaatacagcttatactctaagcactacagc
ctaaaagagaagaatgtgagccctcaagagacaaatgacagatgcaaacagactcactgt
agaagctgtctgtccaaagtgccgaactatacgggtcattttggcgtcaggtctccttac
aaccgttgtgaagcctgtgtacacacaggcaacctgtatgatataagtgaagatcaaatg
ctccaggaagttgttagtcccatgcaccatgatgaagcttatggacagcactggccacag
aatgatggcccacatgtacaccggaggaacaaactgaggttaagtaggcaacactctttt
gacaatatcctcgataactctcgtgatcgtgaaaccgatctgggtagaccagcgcgaagt
gtgagcttaaaggaaaaagacaggttcctcgaggacacctcttatgcaaacatgtttaat
atcagaaatgacaaactcttgggcggcaagacgactctcttcaaccacaacttggaagag
agcaaacgtagtaaatcactttatcctgaccacagctcagagaatcccttcctgcagtct
ttccgagaagaccaacgcctggttcatggcagaagctcctctgacatttacaggcaaacg
gcgccacccaagtcaaggaacgacaacaacctgcggtcatctgtgaagtcgacctcctct
tattgttctcgagatggtcgactacctagtgacatgtacatttcagagcatgttatgcct
tatgtagcaaataagactagtgtatactcaactcccagggtcctcaattcttgcagcaat
agacgtgtgtataagaaaatgcctagtattgagtcagacgtttaa
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integrated database retrieval system
