Polypterus senegalus (gray bichir): 120542271
Help
Entry
120542271 CDS
T08668
Symbol
cyfip2
Name
(RefSeq) cytoplasmic FMR1-interacting protein 2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04810
Regulation of actin cytoskeleton
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120542271 (cyfip2)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120542271 (cyfip2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120542271 (cyfip2)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120542271 (cyfip2)
Factors involved in mRNA localization
Other mRNA localization factors
120542271 (cyfip2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
zf-CW
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
120542271
NCBI-ProteinID:
XP_039630530
LinkDB
All DBs
Position
13:complement(13201607..13424738)
Genome browser
AA seq
1253 aa
AA seq
DB search
MTTHVTLEDALSNVDLLEELPLPDQQPCIEPPPSSIMYQANFDTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGHEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMKFMYFQRKAIERFCSEVKRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNRITQCLHQQLEVIPGYEELLAD
IVNICVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNVSNIYKLDAKKRINLSKIDKFFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSKWTCAQSSISPQYNLCEQMVQIRDDHIRFI
SELARYSNSEVVTGSGLDSQKSDEEYRELFDLALRGLQLLSKWSTHVMEVYSWKLVHPTD
KFCNKDCPGTAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNQAIRNTIY
AALQDFAQVTLREPLRQAVRKKKNVLISVLQAIRKTICDWEGAREPPNDPCLRGEKDPKG
GFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLDGPIVLAIEDFHKQSFF
YTHLLNFSEALQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEPSMM
EYVLYPLDLYNDSGYYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGSV
LLDKRFRAECKNYGVIIPYPPSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYKSLD
HAISRFESEDLTSIVELEWLIEVNRLTHRLLSKHMTLDSFDAMFREANHNVSAPYGRITL
HVFWELNFDFLPNYCYNGSTNRFVRTAILFTQEPQRDKPANVQPYYLYGSKPLNIAYSHI
YSSYRNFVGPPHFKTICRLLGYQGIAVVMEELLKIVKSLLQGTILQYVKTLIEVMPKICR
LPRHEYGSPGILEFFHHQLKDIIEYAELKTDVFQSLREVGNAILFCLLIEQALSQEEVCD
LLHAAPFQNILPRVYIKEGERLEVRMKRLEAKYAPLHLVPLIERLGTAQQIAIAREGDLL
TKERLCCGLSMFEVILTRIRSYLQDAVWRGPPPTNGVMHVDECLEFHRLWSAMQFVYCIP
VGTNEFTAEQCFGDGLNWAGCSIIVLLGQQRRFDLFDFCYHLLKVQRQDGKDEIIKNVPL
KKMADRIRKYQILNNEIFAILNKYMKAVETDSSTVEHVRCFQPPIHQSLATTC
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatgttactttggaagatgctctctcaaatgtggaccttctggaggagcta
ccccttccagaccagcaaccatgcatcgaacctccaccttcgtccattatgtaccaggcg
aactttgataccaactttgaagacagaaatgcatttgtcactgggatcgccagatacatc
gaacaagccacagttcactccagcatgaacgagatgctggaggagggtcacgagtacgcc
gtcatgctgtacacatggagaagctgctcccgggccattccacaggtaaaatgcaacgaa
caacccaaccgtgtagaaatttatgaaaagacagtagaagttcttgagcctgaagtcaca
aaactgatgaagttcatgtactttcagcgtaaagcaattgagcggttctgtagtgaggtg
aaacgcttgtgtcatgctgaaaggagaaaggactttgtgtcagaagcctatcttttaacg
ctggggaagttcattaacatgtttgctgtgcttgatgagctgaaaaacatgaaatgcagt
gtaaaaaatgatcactcggcctataaaagagctgcacagtttttacggaaaatggccgac
cctcagtcaattcaggaatcacaaaatctctcgatgtttttggcaaatcacaacagaatt
acccagtgccttcatcagcagttggaagtaatccctggatatgaagagctgttggcagac
atcgtaaacatctgtgtggattactatgaaaataagatgtatctgactcctagtgagaag
catatgctgttaaaggtgatgggatttggtctgtacttgatggatggaaatgtgagcaac
atttataaactggatgccaaaaagaggatcaaccttagtaaaattgacaagtttttcaag
caattacaagtggtgcctctctttggagacatgcagatagaacttgccagatacattaag
accagtgctcactatgaggaaaacaaatccaagtggacgtgtgctcagagtagcatcagc
ccacagtacaacctttgtgaacaaatggttcaaatcagggatgatcacattcgctttatc
tctgaactggcccgctacagcaacagcgaggttgtgacaggatctggattagacagccaa
aagtcagatgaagagtatagagaactttttgatttggcgctccgaggtcttcagctgcta
tcaaaatggagtactcatgttatggaagtgtattcgtggaaattagtgcatccaactgac
aaattctgtaataaggactgtccaggaaccgcagaggaatacgaaagggctacccgctat
aattacaccagtgaggagaaatttgctttagtagaagtgattgccatgataaaaggactc
caggtactcatgggtaggatggaaagtgtcttcaaccaagccataaggaatactatttat
gcagccttgcaggattttgctcaggtgacacttagagagcctctacgacaagctgtccgg
aaaaagaaaaatgtacttataagtgttcttcaggcaataagaaagacaatttgtgactgg
gagggagcccgtgaaccaccgaatgacccttgtttgagaggtgagaaggatcctaaaggg
ggcttcgatatcaaggtgcctcggcgagcagtggggccgtcaagcacacagctttatatg
gtgagaactatgttggagtctctcatcgctgacaagagcggctccaagaaaacattaaga
agcagcttggatgggccaatagtccttgcaattgaggatttccataagcaatcctttttc
tatactcatctgctcaattttagcgaagccctccagcagtgctgtgatttatcccaactt
tggttcagagaattcttcttagagttgacaatgggacgtagaatccagtttccaattgaa
atgtcaatgccatggattttgacagaccatattctggagaccaaagagccttctatgatg
gagtatgttttgtaccccttagacctctacaatgatagtggatactatgccctgaccaaa
tttaagaaacagtttttgtatgatgaaattgaagctgaggtgaatctttgctttgaccag
tttgtttacaaattagcggaccagatttttgcttattataaggcaatggctggcagtgtt
cttctagataagcgattcagagcagaatgtaagaactatggagtgatcattccgtacccc
ccatccaaccgctatgaaacacttcttaagcaaagacatgttcagcttctcggaagatcc
attgatcttaaccgattgattacacaaagaatatcagcggcaatgtataaatctctggat
catgcaattagtcgatttgagagcgaagatctcacatctatagtggaattggaatggctg
atagaagtgaatcgcttgacccatcgtctcctctccaagcacatgaccctcgacagtttt
gacgccatgttcagggaagccaatcataacgtgtcagctccgtatgggcgtataacgctt
catgttttttgggagttgaactttgacttccttccaaactactgctacaatggatccaca
aacaggtttgtacggaccgccattcttttcactcaggagccacaaagagacaagccagca
aatgtccagccctactatctttatgggtcaaagccattgaacattgcctactctcacatc
tacagctcatatagaaattttgtggggccacctcatttcaagacaatatgccggctcctc
ggataccaaggcattgcagtggtaatggaggaacttctcaaaattgtcaaaagcctgctt
caaggcacaattctgcagtatgtaaaaacattaatagaagtgatgcccaaaatatgtcgc
ctgccaagacacgagtatggctctccaggaattttagagttttttcaccaccagctgaag
gacataattgaatacgcagaactgaagacggacgtattccagagtctccgagaagtgggg
aacgcaatcttattctgtttgctcattgagcaagctttgtcccaagaagaagtgtgcgat
ttacttcatgctgcgccatttcagaacatcctgcccagagtgtacataaaagagggagag
cgcttagaagtcagaatgaaacgactagaagcgaagtacgcgccgcttcacctggtccca
cttatagagcgtctggggacggcacagcaaattgctattgcaagagaaggagaccttctg
accaaagagcgcctttgttgtggtctgtcaatgtttgaggtcatcctcacccggatccgc
agctacctccaggacgcagtgtggaggggaccaccaccgaccaatggggtgatgcatgtg
gacgagtgcttggaatttcatcgcctctggagcgccatgcagtttgtttattgcatcccg
gtggggacgaacgagtttacagctgaacagtgcttcggagatgggctcaactgggccggt
tgctcgataattgtgttactaggacagcaacgacgatttgacctcttcgacttctgttac
caccttctcaaagtgcaacggcaagatggaaaagacgaaatcatcaaaaatgtgccactg
aagaagatggcagacaggatcagaaagtaccaaattttaaacaatgagatctttgccatc
ctgaacaagtacatgaaagcggtggagacggacagctcgacggtggagcatgtgcgctgc
ttccagcctccgattcaccagtcgctggccaccacctgctga
DBGET
integrated database retrieval system
