Polypterus senegalus (gray bichir): 120542274
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Entry
120542274 CDS
T08668
Symbol
rab11fip3
Name
(RefSeq) rab11 family-interacting protein 3 isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120542274 (rab11fip3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542274 (rab11fip3)
Membrane trafficking [BR:
psex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
120542274 (rab11fip3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RBD-FIP
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
ZapB
WD40_alt
Motif
Other DBs
NCBI-GeneID:
120542274
NCBI-ProteinID:
XP_039630535
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Position
13:163492871..163521248
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AA seq
893 aa
AA seq
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MEQMLLSSPTGRSDWDLDKKMGELGFILLEADKGPGLPPVRGERTKAALDFMSGDKELVS
LNLGGFFRSSRYPTVNELLAWDNGLDYPVLQWEGKASPDDPQGPAVLVLQDGDIGGHGAP
ASAELDARSALSPDPPLREESHGAASPETVGRVSLPLDDIMPGSRGQEGSAQGPEDQDLP
PSSPLEGEPCQSSGGAAAWADFEPTAQTTTSLSRRASPSSLERGASPGSNVAMEDLASER
ESWDGAPRDVLDWLGDADRLDQRTLHVPVGEEWALPPEESRLGAAGGAEVDELSALRAVF
DMLDQDKDGFVRTEEFVQFATVYGAEQVKDLTRFLDPTGLGVISFEDFFRGIAAINNGGA
DGQPFETRVYGGAVESASCPEEFEDFTALEQNEVTDSAYLGSESTYSECETFTDEDTGTL
VHQELHEEVETDSAIDAALHYGDDSASGSHCHRLSLDSELNSHSLVTVIGQEEEHFEDFG
EGIETELLPDGPASSEDDASVNSPLESTALHSPSADSFPSGLHDFLREELLDFFCSQCHK
QINRLEDLSARLNYLEMNSASKRLSSKKVARHLRQTSAFCADSMEDVSRDIADFAETDIA
DKVVLLEKRLMELEKDATASGEQHTRLRHENLQVVHRANALEEQLKEQEMRAEEALLLEI
RRHKEALCKVERERGIEIENLQARLQQLDEENSELRSCLPCLRANIERLEEEKRKLQDLM
EDTTIHLNEELESRRKLSDKLAFDRHKNQKEKESTQELIEDLRKQLEHLQLYKLEAEARR
GRSASAGLQEYNSRTREAELEQEVRRLKQDNRNLKEQNDELNGQIINLSIQGAKNLFAAS
FSESLAAEISSVSRDELMEAIHKQKEINYRLQDYIDRIIVAIMESNPSILEVK
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggagcagatgctgctgtccagccccactggccgttcggactgggacctagacaagaag
atgggggagctgggcttcatcctgctggaggccgacaagggccccggtttgcccccggtg
aggggcgagcggaccaaagccgccttggacttcatgtccggtgacaaagagctggtgtcc
ttgaacctggggggcttcttcaggagctcccggtacccgaccgtgaacgaactgctggcc
tgggacaacggcctggactacccggtgctgcagtgggaaggcaaggccagcccggacgac
ccccagggcccggcggtgctcgtgctccaggacggcgacatcggggggcacggagccccc
gcgtctgcagagctcgacgcgcgctctgcgctgtcacccgatccgcccttacgtgaggag
tcccacggggcagcgtcacctgagacagtcggccgggtttcactcccgctggatgacatc
atgccaggtagccgtggccaggagggctcggcgcagggtccggaagaccaggatctgccg
ccgtcttcccccttggaaggagagccgtgccagtccagcggtggcgccgccgcctgggcg
gactttgagccgactgctcagacgaccacttctcttagtcggcgtgccagcccatcctcg
ctggaacgaggggcttcacccggttcaaatgtggctatggaggacctcgcttcagaacgg
gagtcctgggacggcgccccccgggacgtgctcgactggttaggtgacgccgaccgcttg
gaccagagaacgctgcacgtgcccgttggcgaggagtgggcactgcccccggaggagtcc
cgtcttggggccgcggggggcgccgaggtggacgagctcagtgccctcagggccgtgttt
gacatgctggaccaggacaaggatggctttgtgcggaccgaggagtttgtgcagtttgcc
accgtctacggcgcggagcaggtcaaagacttgactcgattcctggaccccaccggcctc
ggggtcatcagctttgaagatttcttcagaggaattgcggccatcaacaatggaggtgcc
gacggccaacctttcgagacaagggtctatggaggagcggtggagagtgccagctgccct
gaggagtttgaggatttcactgctttggagcagaacgaggtgacagacagcgcctacctg
ggctcggagagcacctacagcgagtgcgagacgttcactgacgaggacacgggcacactg
gtgcaccaggagctgcacgaggaggtggagacggacagcgccatcgacgcggcgctccac
tatggcgacgactcggccagcgggtcccattgtcaccggctgtctttggactcggagctg
aacagccactccctggtgaccgtcatcggccaggaggaggagcactttgaggactttggt
gagggcattgagaccgaactcctgcctgatggtcctgccagctccgaagacgatgccagt
gtgaactcccctctagagagcaccgccttacactcccccagcgccgactctttcccttcc
ggtttgcacgacttcctccgggaggagctgctcgactttttctgcagtcagtgccacaag
cagattaaccgactcgaggacctgtctgcccgcctcaattaccttgagatgaatagtgca
agcaagcgactctccagcaagaaggtggcaaggcatctccggcagacgagcgccttctgt
gccgacagcatggaggacgtgtccagggacatcgccgactttgctgagacggacatcgcc
gataaggtggtcctactggagaagcgactcatggagttggagaaggacgcgactgccagc
ggagagcagcacacccgcctgcgacatgagaacctccaggtggtgcacagagccaacgcc
ctggaggagcagctgaaggagcaggagatgcgggcagaggaggccctgctgctggagatt
cgcaggcacaaggaggcgctctgcaaggtggagagggaacgtggcattgagattgagaac
ctgcaggccaggctgcagcagctggacgaggagaacagtgaactgcgctcgtgtctgccc
tgcctgcgcgccaacatagagcggctggaggaggagaagcggaagcttcaggacctgatg
gaggacaccaccattcacctgaatgaagagctggagagccggcgcaagctgagtgataag
ctggcattcgacagacacaagaatcagaaggagaaggagtccacgcaggagcttatcgaa
gacctgcggaagcagctggagcacctgcagctctacaagctggaggccgaggccaggagg
gggcgctctgccagcgcggggcttcaggagtacaacagcaggacccgcgaggccgagctg
gagcaggaggtgcgccgcctcaaacaggacaaccgaaacctgaaggagcagaacgacgag
ctcaacgggcagatcatcaacctgagcatccagggtgccaagaacctgtttgctgcctcc
ttctcagagtccctggcagccgagatcagctcggtgtcccgcgatgagctcatggaggcg
attcacaagcagaaggagatcaactaccggctgcaggattacatcgaccgcatcatcgtg
gccatcatggagtcgaacccctccatcctggaggtaaagtaa
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