Polypterus senegalus (gray bichir): 120542280
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Entry
120542280 CDS
T08668
Name
(RefSeq) RNA exonuclease 5-like
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120542280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psex03009
]
120542280
Ribosome biogenesis [BR:
psex03009
]
Eukaryotic type
Pre-60S particles
RNases
120542280
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
120542280
NCBI-ProteinID:
XP_039630551
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All DBs
Position
13:complement(125410886..125453033)
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AA seq
794 aa
AA seq
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MGSEVNGECKRKRKNCSISNGQEDLLIKKTKILNASNCSVPDEAKIPRLSVPFSSIQNPI
SIEQVSELLQFAALGKLHGAKKPSWCRLHHQRKLTGVNVIIVQGVSQLHFYRYFLHFKNI
RRIYSHKFSLSTLPPPDDFLCRILNMRFEETKTPTDIETHFSKETSSHSSKHVSAASALD
LNVDPIIKRYGAEKGGLTKYLLSKKEMKKNDYPMDGYPDYKDYVTTNCTGPVTDDSPLFG
LDCEMCATDKGMKLTRVSLVDNNGQCIMDELVKPKEKIVDYLTKFSGVTEALLEPITTTL
QDVQKQLKKLLPSNAVLVGHSLNFDLQALEMTHPYILDTSLLFIRNFGRKFKLKFLAGAV
LGWRIQCEARTGHDPCEDAMAALGLAQYFIREGPKKVAELMLDDLLRKYQNSEHDPSFVY
TEAVQPEVFSRHQKTLDNGLESNSLLDSLHKVNLPGIYIVKKGHGNKLPCQEGKLDRIEC
TSEKEVLQEAMKEIPSRFFSIVNFSSYEKSQQMMVDKVAQMCTVYAGPFGKDFEMKHVKK
LFLSCGPITSINIIHGTLMPFVCVEYEVLEGAHLAMEFLNGYELDGSTIKVVRPVTTATL
DYDLVLKELESEARNENVIFVSGVSKKLTESDLHHKFSTFGQIEGVFLPRDQLTGKHRKY
GLIKYQTALGSTSALSSEVFLHKRKIKKCWAYTPFYLHTWTNHNSHDTLQISSTTRTLLP
NVISRFNDQKLHLEENIPRQMKKIDKKVGKIFKSLPIKTFCLLLFPGHDRSNGSLPGLCM
TSIKRFPSNALGTS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgaagttaatggtgagtgtaaacggaagagaaaaaattgcagtatttcaaat
ggccaagaagatttattgataaagaaaactaaaatcttaaatgcaagcaactgctctgtc
ccagatgaagcaaagattcctagattgtctgtgccattcagcagtatccagaatccaatt
agcattgagcaagtgtcagaactgttgcagtttgctgctttgggcaaattgcatggtgca
aagaaaccaagttggtgccgtcttcatcatcagaggaagcttactggtgttaatgtgatc
attgttcaaggtgtgagccagttgcacttttatagatacttcctccactttaaaaacatc
agaaggatatacagccataaatttagcttgtcaacactgccacctcctgatgattttctg
tgcagaatattaaacatgagatttgaagaaaccaagacacctacagatattgaaacacat
ttttcaaaagaaacttcatctcattcttccaagcatgttagtgctgcttcagctttagac
ctaaatgttgatccaataataaagaggtatggagcagagaaaggagggcttaccaaatat
ttactaagcaaaaaagaaatgaaaaagaatgattatccaatggatggttatcctgattat
aaagactatgtaactacaaattgcactggcccagttacagatgacagcccactcttcggt
cttgattgtgaaatgtgtgcaacagacaagggaatgaagttgacacgtgtctcattggtg
gacaacaatggacagtgcataatggatgaacttgtgaaaccaaaggaaaagattgttgac
tatctcacaaagttttctggagtaactgaagctctactggagccaataacaacaactctc
caggatgtgcaaaaacaattaaagaagcttctgcccagcaatgctgttcttgttggtcat
tccctaaattttgatttgcaggctttggagatgactcatccttatatccttgatacctcg
ttgctttttattcgtaattttggcagaaaattcaagctgaagttcttggcaggagctgtg
ctgggatggagaattcagtgtgaagcaagaactggtcatgatccatgtgaggatgctatg
gcagcacttggattggctcagtattttataagagaaggacccaaaaaggtggcagaacta
atgctagatgacttgctaagaaaatatcagaactctgaacacgacccatcctttgtgtac
acagaagcagttcagccagaagttttcagtagacatcaaaaaacacttgacaatgggctt
gaaagtaacagcctcctagattctctccacaaagtgaatttgccaggaatttatattgtt
aaaaaaggtcacggtaataagctaccttgccaggagggaaaattggacagaattgagtgc
acatctgaaaaggaggttttgcaagaagccatgaaagaaatcccatcaagattttttagc
attgtgaatttttcctcttatgagaagtctcagcaaatgatggtggacaaagtagcacag
atgtgcacagtttatgcaggaccctttggtaaggattttgaaatgaaacatgtgaagaag
ctctttctgtcctgtggtccaataacctccattaatataattcatgggactcttatgcct
tttgtgtgtgtcgagtatgaagtgctagaaggagcacatctagcaatggagtttctgaat
ggctatgaattggatggcagcactataaaggtagtgaggccagtaacaaccgcaacacta
gattatgaccttgtcctgaaagagctggagtcggaggcaagaaatgaaaatgtcatcttt
gtgtctggagtatccaagaaattaactgaatctgaccttcaccataaattcagcacattt
ggacagattgaaggtgtctttctaccaagggaccagttaacagggaagcatcggaagtat
ggccttataaagtaccagacagcattggggtcaacttcagctctttcatctgaggtgttt
ctgcacaaaaggaaaataaagaagtgctgggcctacacacctttctacttgcacacttgg
accaaccataattcccatgatactttacagatctccagtactacaagaacattgctgcca
aatgtgatatcaagattcaatgatcaaaagctccatctggaggaaaacattcctaggcaa
atgaaaaaaatcgacaagaaggtggggaaaattttcaagtcgcttcccatcaaaacattt
tgtctgctgctatttccagggcatgacagatctaatggaagtctgcctggcctttgtatg
acttcaataaagcgcttcccgtccaatgcattagggacgtcatga
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