Polypterus senegalus (gray bichir): 120542287
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Entry
120542287 CDS
T08668
Symbol
arpc1b
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04144
Endocytosis
psex04517
IgSF CAM signaling
psex04530
Tight junction
psex04810
Regulation of actin cytoskeleton
psex05100
Bacterial invasion of epithelial cells
psex05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120542287 (arpc1b)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120542287 (arpc1b)
09144 Cellular community - eukaryotes
04530 Tight junction
120542287 (arpc1b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120542287 (arpc1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120542287 (arpc1b)
05100 Bacterial invasion of epithelial cells
120542287 (arpc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542287 (arpc1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
psex04812
]
120542287 (arpc1b)
Membrane trafficking [BR:
psex04131
]
Others
Actin-binding proteins
Arp2/3 complex
120542287 (arpc1b)
Cytoskeleton proteins [BR:
psex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
120542287 (arpc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
eIF2A
Beta-prop_EML
WD40_Gbeta
Rax2
EIF3I
RMC1_N
WDR90_beta-prop_4th
PEP5_VPS11_N
WD40_MABP1-WDR62_1st
SH3_3
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
120542287
NCBI-ProteinID:
XP_039630556
LinkDB
All DBs
Position
13:143047954..143081468
Genome browser
AA seq
369 aa
AA seq
DB search
MSYHSFQLEPISCHAWNKDRTQIALCPNGHDVHIYKKEGNKWTKIHELKEHNGQVTGIDW
GPESNRIVTCGTDRNAYVWTLKGQVWKPTLVILRINRAARCVKWSPKENKFAVGSGSRLI
SICYFEQDNDWWVCKHIKKPIRSTVLSLDWHPNNILLAAGSCDFKCRIFSAYIKEVEEKP
SPTPWGSKMPFGELMFESSGTAGWVHGVCFSESGNRVAWASHDSTVAVVTAGKSTTISSL
SSESLPLLSIVFITENSLVAAGHDCYPVLFTYNEAKGEIKYGGKLDVPKQSAQRGLTARE
RFQNLDKKASTDANEGVLESIHKNSISQISVMEGGKAKCTKFCTTGMDGGMAIWDVKTLE
SALKDLKIV
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgtcctaccacagttttcagctggaaccaattagctgtcatgcctggaacaaagatcga
actcaaattgccttgtgtccaaatggtcatgatgtccatatctacaagaaggaaggaaac
aagtggacaaagatccatgaactgaaagagcacaacggtcaagtgacaggcattgactgg
ggtcctgagagcaatcgcatcgtcacctgcggaactgaccgcaatgcctacgtgtggaca
ctgaagggccaggtatggaaacccaccctggtaatcttgaggatcaaccgggcagcacgt
tgcgtcaagtggtcccccaaggaaaacaagtttgcagtgggcagcggatcaagactcatt
tcaatctgctactttgagcaggataatgactggtgggtgtgcaagcacatcaagaagcca
attcgttccactgtcctaagcttggactggcatcccaacaacattctactggcagcgggc
tcgtgcgacttcaagtgcaggatattttctgcttacatcaaagaagtagaagagaagcct
tctccaaccccctggggatcgaaaatgccttttggagaactgatgtttgagtcgagtgga
actgcaggctgggttcatggggtttgtttttctgaaagtggaaacagagttgcctgggcc
agtcatgacagcacggtggctgttgtaactgctggcaaaagcaccacgatttcctccctg
agctctgaaagcttgcctcttttgagtattgttttcatcactgagaacagtcttgttgct
gcaggtcatgactgctatcctgtgctgtttacgtacaatgaggccaaaggtgagattaag
tatggcggcaagctggatgtgccaaagcaaagcgctcaacgtggcttgacagccagagaa
cgcttccaaaatctggataagaaggcatcaactgatgccaatgaaggagtcctggagtcc
atccacaaaaatagcatcagccaaatctcagttatggaaggagggaaagctaagtgtact
aaattctgcaccactggaatggatggtggaatggcaatctgggatgtcaagacccttgaa
tcagccctcaaagatttgaaaattgtctga
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integrated database retrieval system
