Polypterus senegalus (gray bichir): 120542305
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Entry
120542305 CDS
T08668
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542305 (vps35l)
Membrane trafficking [BR:
psex04131
]
Protein recycling
Others
Retriever complex
120542305 (vps35l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
120542305
NCBI-ProteinID:
XP_039630595
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All DBs
Position
13:complement(122172032..122273095)
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AA seq
967 aa
AA seq
DB search
MIVKMASLHWHSRTRQYQLEKESLRLETVPVEFGDYHPLKPITVTDSKTRRTGRKGSTSS
SSSSSSSAPDPLSSILDGSDPLSVFAAAVTDPLSARISAVESGNRKQDKDDETDVGTDFE
PWSGKRSEILARFTTTEKLSINLFIGSDKGKAPSPSSAVSEKVRTRLEELDDLEEGSQKE
MLNLSQQDYVNRIEELNQNLKEAWASDQKVKALKIVIQCSKLLSDTTVIQFYPSKFVLIT
DILDTFGRLVYDRIWSMCSDTQLLPDSFSSDDVNDTARETCLNWFFKIASIRELIPRLYV
EAAILKCNRFLSKMGIQETLPRLTAMIRGIGDPLVAVYARAYLCRVGMEVAPHIKESLNK
NFFDLLTTFKQIHGDSVQNQLVMQNVEIPVYLTLYSPAIDWIMQCLAYRAPEVLLTEMME
RCRKLGNNALLLNSIMSAFRSEFIAARAMDFIMMIKESDEAGFPKHLLFISLGRSLACAD
PPENDRLTVLNEAWKVITKLRNQQDYINCAETWVEYTCRHFTKREVNTVLADIIKHMTPD
RAFEDAYPQLQSVIRKILLYFHDFSVLFSMERFLPFLDMFQRDSIRVNVCQAIMEVFIRH
QQEPTRDPVILNALMHVCKTMHDSVNALTLDDEKRSIAGLINGFIRMVSFGRDFEQQLSF
CVEARATFCNLETVLSQLIHSVNQLAMATHRVVKGSHSRKTAAFVRACAAYCFITIPSLT
GIFNRLILYLHSGQIALTNNCLSQADAFFKAAISLLPDVPRLVLVEGKLRPSEGFLIEFL
QNFLSTLLVVPDHPEQGVLFLVRGLLNIVQDYNWEDTNDAKLRIYISALPLLAAMSQENY
LYRINKVESNETLYGGDPKFVAEINKLCDTLIDQILDHLKSLGKEEAFQRQSSIAIMLLN
TLLAHGDLRNNRLNQMVVNLWNLAQKYGYADTRAMVKILEFIKLQGQKADMRHFSELAVR
LPLQSRT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgattgtcaaaatggcttcgttgcactggcactcccggactagacagtaccagttagag
aaggagtcccttcgacttgagactgtacctgtggaatttggagattatcatcctcttaaa
ccaatcactgtaactgattccaaaaccaggcggactgggcgcaaggggagcacctcatct
tcttcatcttcttctagctctgcccctgatccactcagttcaattctagatgggtctgat
cccttgtctgtttttgctgctgcagtgactgaccctcttagtgccagaattagtgctgtg
gagtctggaaacaggaagcaagacaaagatgatgaaactgatgtggggactgattttgaa
ccatggtctggcaagcgaagtgagatcttggcaagattcaccactacagagaagctttcc
attaatttgtttattggatcagacaaaggaaaagcgcccagtccaagttcagcagtgtct
gagaaggtgcggacacgactggaagaattggatgaccttgaggagggatcccaaaaggag
atgctaaatctctctcagcaagattatgtaaatcgcattgaggaactcaaccaaaatctt
aaggaagcttgggcttctgaccagaaggtaaaggctctgaagattgttattcagtgctcc
aaactcctgtcagacacaacagtcatacagttttatcccagcaagtttgttctaataaca
gacatactggacacttttggacgactagtttatgatagaatctggtcaatgtgctcagat
acccaacttcttcctgattctttctcctctgatgatgtgaatgatactgccagagagact
tgtcttaactggttctttaaaattgcctctattagagaacttatccccaggttatacgtg
gaggctgcaattctgaagtgcaacagattcctttcgaaaatgggaatacaggaaacactt
ccacgactgacagccatgatcagaggaattggagaccccctggtggctgtttatgctcgt
gcctacctatgcagggttggaatggaggtggcccctcatataaaagaaagcctgaataag
aacttctttgatcttctcacaaccttcaaacaaattcatggggattcagtgcagaaccaa
cttgtgatgcagaatgttgaaatcccagtttacctgaccctatattcacctgctattgat
tggatcatgcagtgtctggcttacagagctcccgaggttctccttacagagatgatggag
agatgcagaaagttgggaaacaatgctttattgttgaattcgatcatgtcggctttccgt
tctgagtttatagcagctagagccatggacttcatcatgatgatcaaggagagtgatgaa
gctggtttccctaagcatctcctcttcatctcacttggaaggagcctggcctgtgctgat
ccacctgagaatgatcgcttgactgttttgaatgaagcttggaaggtcatcactaaacta
cgcaaccagcaggattatatcaactgtgcagagacttgggtggagtatacctgccgccac
tttacaaaacgtgaagtcaacacagtgcttgctgacatcatcaaacatatgactcctgat
agagcgttcgaagatgcatatccacagctgcagtctgttatcaggaagattttgttgtac
ttccatgacttttctgtgctgttctctatggaacgtttcctgcctttcttagacatgttt
caaagagacagcatcagagtaaatgtgtgccaggctattatggaggtcttcatcagacac
caacaggaaccaacgcgggacccggtcatccttaatgccctgatgcatgtgtgcaagaca
atgcatgactctgtaaatgcccttacattagatgatgagaagagatctattgctggactg
ataaatggctttatcagaatggtttcatttggtcgtgattttgagcaacagcttagtttc
tgtgtggaggcccgggctactttttgcaatctggagactgtgttgtcacaacttatacat
agtgtaaaccaactggctatggcaacacatagggtggtgaaggggtcacactcccgcaag
actgctgcttttgtacgggcatgtgccgcatattgtttcattacaataccctcgctcact
ggcatctttaacagacttatactatacctccactctggtcagatagcgcttactaataac
tgtctgtctcaagctgatgcctttttcaaagctgccatcagcctgctaccagatgttccc
cgtttagtacttgtagaaggaaaactgcgaccttcagaaggtttcctaatagagtttctt
caaaacttcctttctacactgcttgtagtaccggatcatccagaacagggagtgttattt
cttgttcgtggtttactcaacattgttcaagattacaattgggaagataccaatgatgca
aaacttcgcatctatattagtgccttaccacttcttgcagccatgagccaggagaattac
ctgtatcgcatcaacaaagttgaatccaatgaaacactttatggaggagatcctaaattt
gttgccgaaatcaacaagttatgtgatacacttattgaccagatcctagaccacctaaag
agtttgggaaaagaggaggcttttcaaaggcaaagttccattgccattatgcttttgaac
actctcttggctcatggagatctgcggaacaaccgtctaaatcaaatggtcgtcaatcta
tggaatttagcccaaaagtatggctatgcagatacacgggcaatggtcaaaatactggaa
tttatcaaattacaaggccagaaggcagacatgcgccacttttctgaactggctgtacgt
ctgcctttacagtctagaacgtga
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