Polypterus senegalus (gray bichir): 120542312
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Entry
120542312 CDS
T08668
Symbol
irf1b
Name
(RefSeq) interferon regulatory factor 1b isoform X1
KO
K09444
interferon regulatory factor 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
120542312 (irf1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120542312 (irf1b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
120542312 (irf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
Motif
Other DBs
NCBI-GeneID:
120542312
NCBI-ProteinID:
XP_039630608
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All DBs
Position
13:42924665..42932557
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AA seq
310 aa
AA seq
DB search
MPVSRMRMRPWLEMKIDSNEIPGLVWINRDKKIFQIPWKHAARHGWTMDKDACLFRQWAI
HTGKYKPGNSVPDPKTWKANFRCAMNSLPDIEEVKDKSINKGSSAIRVYRMLPPVKKTQR
KDKKSRQKDNKTKQKIKENDIKTEDESSDITDLYLPDDHSGYTAHQGASLQDSETDSSQC
SLVDLNNITEQTEWTNTVEVSVADSTNEMFSFQVSPLHSPDDDDESNFDEVIQIAQALEQ
DHTQWRPSSINGRGFLSNSIGMSIEPNDIDIMGNDLQGDFEFRFYSELRTGSDPSWPLHT
HSLASLLCLH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtttccagaatgcgaatgagaccctggctggaaatgaaaattgattccaatgaa
attcctggactagtctggatcaacagagataaaaagattttccagattccatggaaacat
gcagccagacatggatggactatggacaaagatgcatgtctgttcagacagtgggccatt
cacacaggcaaatacaaacctggaaacagtgtgcccgatccaaaaacgtggaaagccaat
ttccgttgtgcaatgaactctcttcctgatattgaagaagttaaagataaaagcatcaac
aaaggctcaagtgcaatccgagtttacagaatgctgcctcctgtaaaaaaaacacagagg
aaagataaaaagtctcggcaaaaggacaacaaaaccaagcagaagatcaaggagaatgac
attaaaacagaagacgaatcttcagacattactgacctgtatcttcctgacgatcacagc
ggatacacagcccatcaaggagcatcactacaagacagtgaaactgacagttcgcaatgc
agcttagtagacctcaacaatattactgaacaaactgaatggacaaacacagtggaagtg
tctgttgctgacagcaccaatgagatgttctcattccaggtgtcaccgttgcattcacca
gatgatgatgatgaaagcaactttgatgaagttattcagattgcacaagcattggaacaa
gaccatacacagtggcgaccgagcagtattaatggcagaggcttcctgagcaattcaata
ggcatgtcaatagaaccaaatgatatcgatataatggggaatgatcttcaaggtgacttt
gaatttagattttactcagaattgaggactggatcggacccttcatggccattacatacg
cacagtttagcatccctcctttgtctgcactaa
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