Polypterus senegalus (gray bichir): 120542380
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Entry
120542380 CDS
T08668
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542380 (hps1)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
120542380 (hps1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_3
Fuz_longin_2
NPV_P10
Motif
Other DBs
NCBI-GeneID:
120542380
NCBI-ProteinID:
XP_039630753
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Position
1:275885956..275930412
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AA seq
710 aa
AA seq
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MKCLLVVTESAEILFYWTDAAFEKNLREQYGAVENNEDKLPAVEDSINTLFAPLIISCST
LIEKINDIYTSFVTENGHHYILHQFGECLYIAVNGDGSESEDDLRRKIFVLKKLMEVQFG
MVTLNSTLLKKELRPNDTGKRGRLWKMLQGLLDTYDLLRNQEQSFMVEAVERLIHPTLCE
QCIEFLERRVVQQINGSPERAGEEVLHAFILVHTKLLAFYSSRSASSVKPSDLLALILII
QNMHPDISDHGDTAAEPPSLHTYSSGIVIQEKGRRDLLATNISTPSNTSQEDFDVGSTPE
VYYTPQPSPTGKKTELMGTEEECTPVFQFVEPDIQMAEDSLNILESEHRDPAFPRRVFLE
ATFKDGYCPMMPHSMYCLPLWPGISLVLLTKIPNSQIAVSLYNFLEAFSLLEKKLNEVQE
GIPHSRLQSSLPSLADLRTKLDKFIRALGNIDQQLQNTWTDFKNKAFLRTGQGNARELLP
LCRSLRSQLCAIYRQYFVTEGQGSHQRLSENLQKKAFTMMQEKLTDWKDFLLVKSKRNIT
MVSYLEEFPGLIHFIYVDRTAGQMISPSLNVSDDSTSELGKGPLAHFIKSKVWSLVRTSR
RYLQKGYTTVTLRDGDYYFSYFLWFENETGYKLEVIELPVLSDDSAPIGMLAGDYYRKLL
RYYSKTHQTEIIKCYELMTIHLGVVPPDSILQQCCDLARKLWEPSRIPLL
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgcttgctggtggtcactgaaagtgctgagatactgttctattggactgatgca
gcctttgaaaagaacttacgagagcagtatggagcggtggaaaataatgaagataaattg
ccagctgtagaagatagcatcaataccctctttgcacctttaattatctcctgcagcact
ttaattgagaaaataaatgatatttacacttcctttgtcacagaaaatgggcaccattac
atcttacatcagtttggagaatgcttgtacattgctgtaaatggggatggatcagaaagt
gaggatgacctgaggagaaagatatttgtgttgaagaaactcatggaagtgcagtttggg
atggtgacccttaacagcacccttttaaaaaaggaacttcgtcctaatgatacagggaag
cgcggtcgattgtggaaaatgttgcagggtcttcttgacacttacgaccttttgagaaac
caggagcaaagctttatggtagaggctgtagagcgtctgatccatccaacattgtgtgaa
cagtgcattgaatttctagagcgtcgagttgtacagcagattaatggaagtcccgaacgt
gctggagaggaagtactacatgccttcattctagtacataccaaacttcttgctttttat
tcaagccgaagtgccagttcagtgaaaccatcagacctccttgccttgattctgatcatt
cagaatatgcaccctgacatcagtgaccatggagacactgctgcagagccaccatcactt
catacttacagtagcggtattgtcattcaggaaaaggggagaagagacctgttagctact
aacatttccactccatctaacacatcccaagaggattttgatgttggttcaacacctgaa
gtttactatactccacagccttcaccgactggaaagaaaacagaattgatgggaactgaa
gaagagtgtaccccagtttttcagtttgttgaaccagatatccagatggcagaggacagc
ttgaatattttggagtctgagcaccgtgaccctgcattccccaggagagtgtttctggag
gcaacatttaaggatggctactgtccaatgatgcctcattctatgtactgtctgccactc
tggccaggcatctcattggtgcttctcactaagattcctaacagtcagattgcagtgtca
ctgtacaatttcttggaggcattctccttgttagagaaaaaattaaatgaagtccaggag
ggcataccacattcccgtttgcagtcgtctcttccatcccttgcagatcttcgtacaaag
ctcgacaagttcatccgtgctcttggcaacatagatcaacagctgcagaacacatggacc
gactttaagaacaaagcatttttaagaacagggcagggaaatgctcgggagttactcccc
ctctgccgctctcttagaagtcagctgtgtgctatatacaggcagtactttgtgacagaa
ggtcaagggtcccatcaacgattatcagaaaatctgcagaagaaggctttcactatgatg
caggaaaagctgacagattggaaagattttttgctggtgaagagcaaaaggaatatcaca
atggtgtcctatttagaggagtttccaggtctaattcattttatctatgtggatagaaca
gcaggacaaatgatctccccctctctaaatgtatccgatgactctacatctgagcttggc
aaaggtccacttgctcactttatcaaaagcaaggtgtggtctctggtaagaacttcacgc
cgctacctgcaaaaaggttacacaacagtgaccctacgagatggggattattacttcagc
tactttttgtggtttgaaaatgaaacgggatataaattagaagttattgagttgccagtt
ttgtctgatgattcagcccctataggaatgctggctggggactattacaggaagctttta
agatattacagcaaaacacatcaaactgaaattattaaatgttacgaactaatgacaatt
catctgggagttgtccctccagactccattctgcaacagtgttgtgatttagcaagaaag
ctatgggagccctccagaatcccacttctctag
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