Polypterus senegalus (gray bichir): 120542469
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Entry
120542469 CDS
T08668
Symbol
hars
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120542469 (hars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
psex01007
]
120542469 (hars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psex03016
]
120542469 (hars)
Enzymes [BR:
psex01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
120542469 (hars)
Amino acid related enzymes [BR:
psex01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120542469 (hars)
Transfer RNA biogenesis [BR:
psex03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120542469 (hars)
Prokaryotic type
120542469 (hars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
WHEP-TRS
tRNA-synt_2
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
120542469
NCBI-ProteinID:
XP_039630902
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All DBs
Position
13:22693473..22721676
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AA seq
526 aa
AA seq
DB search
MNFIFWKKLNNLGFSTGKLITGLWTTPFKNPLLVMFCHNNAQIASEVAKLLELKAQLGTD
DGKHSFVLKTPKGTRDYNPKQMAIREKVFNIIIGCFKRHGAETIDTPVFELKETLTGKYG
EDSKLIYDLKDQGGELLSLRYDLTVPFARYLAMNKITNIKRYHIAKVYRRDNPAMTRGRY
REFYQCDFDIAGQYDPMIPDAECLKIVHEILSDLQIGDFCIKVNDRRILDGMFSICGVPD
EKFRTICSSVDKLDKASWEEVKNEMVGEKGLAPEAADKIGEYVSMQGGADLAEKLLKDPL
LSQNKQAYSGLTDMKELFKYLELFNVTDKVIFDLSLARGLDYYTGVIYEAVLTQNQMEAQ
PQKQQNDHSTDEPVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERIFSIMEQKAE
ASEEKIRTTETQVLVASAQKNLLEERLKLISELWAAGIKAEVMYKKNPKLLSQLQHCEET
GIQLVAIVGEQELKDGVVKLRNVATRGEENVPRANVVEEIKRALQS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcattttttggaaaaaattgaataaccttggattttctactgggaaattgata
actggcttatggaccacgccttttaaaaatccactgcttgtaatgttctgccataacaat
gcccagattgcaagtgaagtggcaaagctattagaactgaaggcacagttggggacagac
gatggcaaacattcatttgttctcaaaaccccaaaggggaccagagactataatccaaaa
caaatggcaatcagagaaaaggtattcaatatcatcatcggttgttttaaacgtcatggg
gctgaaacaatagacacaccagttttcgaattaaaggaaacgcttacgggaaaatacgga
gaagactcaaaactcatatatgatttgaaggaccagggtggtgagcttctttccctgcga
tatgatttaactgttccttttgctcgttatctagcaatgaataaaattaccaacattaag
agataccacattgcaaaagtgtacagaagagataaccctgccatgaccagagggcggtac
agggagttttatcagtgtgattttgatatagcaggacaatatgatccaatgattcctgat
gctgaatgtctgaaaatagtccatgaaatattgagtgatttgcagataggagatttttgc
attaaggttaatgatcgacgaattttagatggcatgttttccatctgtggtgttcctgat
gagaaatttagaacaatctgttcaagtgtggataaactggataaggcatcctgggaagag
gtaaagaacgaaatggtgggtgagaaaggactggctccagaggctgctgacaagattgga
gagtatgtaagcatgcaaggtggtgctgacctggctgaaaaactgcttaaagacccctta
ctgtcccagaacaaacaggcttacagcggattgacagatatgaaggagctctttaaatac
ctggaacttttcaatgtaaccgataaggtcatttttgatctgagtcttgctcgaggtctg
gactactacacaggtgtcatatatgaagcagtcttgacgcagaaccagatggaagctcaa
ccccagaaacaacaaaatgaccattccactgatgaaccagtcagcgtaggaagtgtagct
ggtggaggccgatatgatggtctagttggaatgtttgatccaaagggcagaaaagtgcct
tgtgttggagttagcatcggcattgaaagaatattttcaattatggaacaaaaggcagag
gcctcagaggagaagattcgaacaactgaaacacaagtgctggttgcctcagcacagaag
aatctattggaggaaaggctgaaactaatttcagagctttgggctgcaggcataaaagca
gaagtgatgtacaagaaaaatcccaagttgctgagtcagttgcagcactgtgaagaaact
ggaatccaacttgttgcaatcgttggggagcaggaattaaaggatggagttgtaaagctt
cgaaatgttgctactagaggagaggaaaatgtgcctcgtgctaatgttgttgaagaaata
aagagagcactacagtcctag
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