Polypterus senegalus (gray bichir): 120542589
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Entry
120542589 CDS
T08668
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120542589 (apex2)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120542589 (apex2)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120542589 (apex2)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
120542589
NCBI-ProteinID:
XP_039631089
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Position
13:68357790..68370097
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AA seq
619 aa
AA seq
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MKIVSWNINGIRTFRGRFQQMLDSLDADIICLQETKVTRDLLDERTAIVEGYNSYFSFSR
GRSGYSGVATFCKNCAIPFVAEEGLTGLLSSKGETVGCYGDRTEFSDEELQQLDNEGRAI
ITQHKIMCSGDREEILTVINVYCPRADPEKPERKLFKLRFYQLLQIRAEAILKTGSHVII
LGDVNTSHKAIDHCDPDDLDSFEDNPGRKWLDNFLFGLVNTEDELDDSASDKVNLQVNKS
GSQEEGGGKFVDTFRFFHPNRPNAFTCWCTLTGARQTNYGTRIDYIFANRNLVENEFVDS
EIMPEVEGSDHCPVRGELRGFSIASPKCPSLCTKYMPEFAGHQQKLSRFLVKVGQPVKPE
EMAEDVPQLPGSQEAEEVRENIRPTLENLGKKRDAQKAPSPVTKRPKSSYTKVKSRQHVS
LLAFFKPKLNDVNTESMPQCNSNINSYQNFETSSESSQEIGSTRSRAPESENCLTENKHL
KTLASRIYTNLSKNEELIDKEIDCESDEKERSHYFLTSPGHHSSNVQGPLDRSERKGSDR
ANDKQSNIGGKSTEFWKSVLHGPPAPPSCKVHGEPCVLRTVKKAGPNLGKKFFVCARPQG
HSSNPEARCNFFLWVEKGK
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgagctggaatattaacgggattcggacgttccggggtcgttttcagcag
atgctggattctctggatgctgatatcatttgtctgcaggaaacaaaagtcactagagac
ctgcttgatgagcgtacagcaattgttgaaggttataattcttacttcagcttcagccgt
gggcggagtggatattctggggtggcaacattttgtaaaaactgtgcaataccttttgtt
gctgaggaagggctgacaggcttgttatccagtaagggagaaacagtgggatgttatgga
gacagaacagagttttctgatgaagaattacagcaactagacaacgagggacgtgctatc
attactcaacacaagattatgtgctctggtgacagagaagagattctgacagtcattaat
gtatattgtccacgtgctgacccagagaaaccagaacgtaagctctttaagctacgtttc
taccaacttctgcaaatccgtgctgaagcaatcctgaaaactggcagtcatgtgatcatc
ctgggtgatgtgaacacttctcataaggccattgatcactgtgatcctgatgatctggat
agctttgaagataacccgggtagaaaatggctggacaatttcttgtttggattagtcaat
acagaggatgagctggatgattcagcatcagataaagtaaatctgcaagttaacaaatca
ggttcccaagaggagggaggtggaaagtttgtggatacttttaggtttttccaccccaat
aggcccaatgcttttacttgttggtgtactttgacaggtgcaaggcagactaattatggc
actcggattgactacatatttgcaaataggaatcttgtagaaaatgaatttgtggattct
gaaattatgccagaagtggagggttcagatcactgcccagtgcgaggtgaactgcgaggc
ttctctattgccagtcccaaatgcccatcactttgcacaaagtacatgccagaatttgcc
ggccatcaacaaaagttgtctcgtttcttggttaaagttggtcagcctgtaaaaccagaa
gaaatggcggaagatgtgccccaacttccagggtctcaggaagctgaagaagtcagagaa
aatatcagacctactttggagaatctcggaaaaaaaagagatgcacagaaggcaccatct
cctgttacaaagaggcctaaaagttcatatactaaagtaaaatctagacagcatgtcagt
ctgctggctttctttaagcctaagttaaatgatgtcaacaccgaaagtatgccccagtgt
aattccaatataaacagttatcagaactttgaaacttcctctgaatcatcacaagaaata
ggaagtacaagaagtagagcaccagaatctgaaaattgtctgacagaaaacaagcatttg
aaaactctagcaagtcggatttatacaaatctgtccaaaaatgaagaactgatagacaaa
gaaatagactgcgaatcagatgaaaaagaaagaagccactatttcctgacatcaccggga
catcattcttcaaatgttcaaggacctttagacaggtctgaaagaaaaggaagtgatcga
gctaatgataaacaaagtaatatcgggggaaagtcaacagaattttggaagtcagtgctc
cacggaccccctgctccacccagctgcaaggttcatggcgaaccatgtgttttacggacg
gttaagaaagcagggcccaatttaggaaagaagttctttgtttgtgcccgaccccaagga
cacagttcaaatccagaagcccgatgcaacttttttctttgggttgaaaagggaaaataa
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