Polypterus senegalus (gray bichir): 120542632
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Entry
120542632 CDS
T08668
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
psex04980
Cobalamin transport and metabolism
psex05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120542632 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120542632 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120542632 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120542632 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psex03036
]
120542632 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
psex03029
]
120542632 (hcfc1b)
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120542632 (hcfc1b)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120542632 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
120542632 (hcfc1b)
MLL-HCF complex
120542632 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120542632 (hcfc1b)
Mitochondrial biogenesis [BR:
psex03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120542632 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
120542632
NCBI-ProteinID:
XP_039631154
LinkDB
All DBs
Position
13:71924419..72075682
Genome browser
AA seq
1992 aa
AA seq
DB search
MASPASVGAGAASSGSALQPRWKRVLGWSGPVPRPRHGHRAVSIKELMVVFGGGNEGIVD
ELHVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASR
WEWKRLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYVLE
LRTGSSVVGWDIPITYGVLPPPRESHTAVVYTEKESKKSRLVIYGGMSGCRLGDLWTLDI
DTLTWNKPTLSGTAPLPRSLHSATTIGNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLA
CLNLDSMTWEPIVMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLW
YLETEKPPAPSRVQLVRANTNSLEVSWGAVPTADSYLLQLQKYDIPAATAVTSPTLNPTP
SLPVNPPKSPAPAAAAPSAQSLPHTGITLVPQSASPTTSGLPVLPSMPGSPLGAATARGP
AILKVAAPQSSTGTSIVTVRQANQVGKSPVTVTSLPAGVRMVVPAQSGQGAAIGSSPQMS
GMAALAAAAAATQKIPPSSSATMLNVPAGATIVKTVAVTPGSSTIPATVKVASPVMVSNP
ATRMLKTAAAQVGTSATSTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVK
SPITMPGGSALISNLGKVMSVVQTKPVQTSAVTGQASTNPVTQIIQTKGPLPAGTILKLV
TSADGKPTTIITTTQAGGTGNKPTILGISSVSPTTTTKPGTTTIIKTIPMSAIMTQPGGT
GVTSSPGIKSPITIITTKMMTSGTGAPAKIITAVPKLTAGPGQQGVTQVVLKGPPGQPGT
ILRTVPMGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTMTGTVSTSLAGGSVASANA
SLATPITTLGTIATLSSQVINPTAITVSAAPTSLTGATGLSTPTITMQPVNQPTQVTLIT
TPSGVEAQPVQDLPVSILASPTSEQPTTVTIAESGSGDQPGTVTLVCSNPPCETHETGTT
NTSTTAMSSMGSVQRLCSNPPCETHETGTTNTSTTAMSNMSSVPRVCSNPPCETHETGTT
STPTTAVCNMGSVQQVCSNPPCETHETGTTNTFTTSSSNMSSNQGALQNVCSSPPSETQE
TGTTSTSTTASSNMGSDQVELVQSTGGSAVSCPSVSVSSDEAPSGSSVVLQTSSLQRENL
RTGTTNTSTIARSNMGSDITGTVPSAQSNQPTHKTSMVGTACPISSVSSSTDTVQNGCSN
PPCETHETGTTSTSTTVSSSMGSNEADLIQRVCSNPPCETHETGTTNTSTTASSSMGSTQ
TETVQRVCSNPPCETHETGTTNTATTATSSMGTNEAQQSGDTVQEEAVTTASATPPSPQT
PVTSSPPATLSSTQNRAVTILTQSTPTPGPAVPIISSISEGSSILESEIPEEVTEPIPTE
EAQPSLDSEQDQDHSGANLTSDDLLDASEAMQTEPSESEAHSQSQLLDAASVGETTDTTL
HAQDVDLQAAMETQGVQEEPEDQGEANQATTDVEPLSLPQELMAETQPSTLMVTGLTPEE
LAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVMSAGDAMDTSDTGHEGQQTTIPIVL
TQQELAALVQQQHQLQEAQAAAAAAAAAVAQQQANTQQHHHQAAALPTEALAPADSLNDP
SSESNGHSELASAVTSAVAGLLPATPTESLAPSSTFAPPQPIVVASPAKMQAAAALAEVA
NGIESAGLKSDTMTTPAPTKVPVKKENQWFDVGVIKGTNMVVTHYYLPADDTPVGDEDTS
TIPDYNQLKKVELQPGTAYKFRVAGINACGRGPFSEISAFKTCLPGFPGAPCAIKISKSP
DGAHLTWEPPSVTSGKIIEYSVYLAIQSAQAGEPKTSAPAQLAFMRVYCGPSPSCLVQSS
SLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESNKDGTAAKPAGKRPVSSSPEV
KASGPKKVKSDQ
NT seq
5979 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcctgcatcggtgggcgctggggcagcctcatcgggctcggctttgcagccc
cggtggaaaagggtccttggctggtctggcccggtcccccgacccaggcatggacaccga
gccgtctccatcaaggagctcatggtggtgtttggaggtggaaacgaagggatcgtggat
gaacttcacgtatacaacactgccaccaatcaatggtttatcccagcagttcgaggtgac
atcccacctggatgcgccgcttatggatttgtgtgtgatggtactcgtcttcttgtcttt
ggaggcatggtggagtatggaaaatacagcaatgacttgtatgaactgcaggccagtcga
tgggagtggaaaagactgaaacccaaagccccaaagaatggacctccaccttgtcctcgc
ctaggacatagcttttcattagtgggaaataaatgctatttattcggaggattggccaat
gacagtgaagatccaaaaaacaacattcccaggtatttaaatgacctatatgtcctagag
ttgcgcacaggctccagtgttgtaggatgggatatcccaatcacgtatggtgtgttgccc
ccaccacgggagagccatactgctgtagtatatacggaaaaggagagcaaaaaatcacgt
cttgtaatctatggtggaatgagtggctgcagacttggtgacctttggacacttgatatt
gatactttaacttggaacaagcctacattgagtggcacagcccctttgccacgtagtttg
cactctgccaccacaattggaaacaaaatgtatgtttttggtggctgggtccccttggtc
atggatgatgtgaaagttgcaacacatgaaaaggaatggaaatgtacaaacacgttggcc
tgtctaaatctggattctatgacctgggagccaattgtaatggacacactggaagataac
atccctcgggcaagagcaggtcactgtgctgttgctatcaattcccgactgtatgtgtgg
agtgggcgtgatggataccgtaaagcctggaacaaccaagtctgctgcaaagacttgtgg
tatcttgagactgaaaaacctcctgctccctcacgagttcaactggttcgtgctaacaca
aactcacttgaagtgagttggggtgctgttcctactgcagatagctacttactgcagttg
cagaaatatgatatcccagcagcaactgcagttacttctccaactctaaatcctactcct
tctctgccagtaaaccctcctaaaagccctgccccagctgcagcagcaccctcagcccag
agccttccacacacgggtattacccttgttccacagtctgcttcaccaacaacatcaggg
ctgcctgttctgccatccatgccaggaagtcctcttggtgctgccactgcaaggggacca
gccattttgaaagtggcagctccccagtcctctacaggaacatcaattgtaacagtgcga
caagctaaccaggtggggaaatctcctgtcacagtcacatccttaccagctggggttaga
atggtagttccagcacagagtgggcagggagcggcaattgggagcagtccacagatgagt
ggcatggctgccttggcagcagctgcagctgcaacacagaagatccctccttcatcttca
gccaccatgcttaatgtcccagcaggagcaacaattgtgaagacagtggctgttacccca
ggttcttccacaatccctgccactgttaaagtagcttctcctgtcatggtaagcaaccct
gcaacacggatgttgaagactgcagctgcacaggtgggcacttctgccacctctacccca
aacacaccaacaagacccattattactgtgcacaagtcgggcactgtcactgtagcacaa
caggcgcaagtggttactactgtggttggtggagttacaaaaacaattactctagtaaaa
agtcccatcacaatgcctggtggtagtgctttgatttccaatttaggtaaagtcatgtct
gttgtccaaacaaagccagtgcagacatcggcagtaactggacaagcttcaacaaatcca
gtgacacaaattattcagacaaaaggtcccttgcctgctggaaccattttgaagttggta
acgtcagctgatggaaagcctactaccatcatcacaacaacacaagctggaggaacagga
aacaagcccactattttggggatcagcagtgtttcccctaccacaactacaaagcctggc
accacaaccattataaagactattcctatgtctgccatcatgacgcagcctgggggaaca
ggcgtaacaagtagtccaggaatcaagtcacccattactatcataactactaaaatgatg
acctctggaacaggagcacctgccaaaataattactgctgttcctaaattgactgcagga
cctggtcagcaaggagttactcaggtggttttaaagggtcctcctggccagcctggcact
atacttcgcactgttccaatgggaggagttcgattggtcacccctgtcacggtctcagct
gtgaaacccacagtcaccactcttgttgttaaaggtaccacaggtgttacaactctgggt
actatgacaggaactgtttcaaccagccttgcaggaggtagtgttgctagtgccaatgcg
tctttagccacacctattactacacttggaaccattgctactctctccagccaggttatt
aatcccacggcaattactgtgtctgcagctcccacaagtcttactggagcaactgggctt
tctactccaacaatcaccatgcagcctgttaaccagcccactcaagttaccttaataact
actcccagtggtgtagaggcacaacctgtccaagacctacctgtgtccatcctggcttct
ccaacatctgagcaacccacaactgtcacaattgcagagtctggttctggtgatcagcca
ggcacagtcacattggtttgctccaatccaccatgtgagacgcatgagactggaactacc
aacacatccacaacagccatgtccagcatgggttcagtccagagattgtgctctaatcct
ccatgtgagacccatgagactggtaccactaacacttccacaactgccatgtccaatatg
tcttcagtccctagagtttgttcaaatccaccatgtgaaactcatgaaactggtaccact
agcacacctacaacagctgtatgcaatatgggatctgtccagcaggtgtgttcaaatcca
ccttgtgagacccatgaaacaggtactactaacacattcacaacgtcctcgtcaaacatg
agttccaaccagggagctttgcaaaatgtttgttcaagtcctccatctgaaacccaggag
actggcacaacctcaacatctactacagcttcatctaatatgggatctgaccaggttgaa
ctggttcagagtactggtggttctgctgtttcatgcccatcggtttccgtcagctcagat
gaagctccttcaggctccagtgttgtcttgcagacctccagtttgcagagggagaattta
cgaacaggcaccacaaatacatcaaccatagctagatccaacatgggctcggatataact
ggcacagtgccaagtgcacagtctaaccagccaacccacaaaacatctatggttgggaca
gcttgtccaatttcttcagtgtctagctctacagatacggtgcaaaatggttgctccaac
ccaccatgtgaaacacatgaaactggcaccaccagcacttccacaacagtctcttccagt
atgggttccaacgaggctgatttaatccaaagggtttgctcaaatcctccttgtgaaaca
catgaaactggtaccacaaacacctcaacgactgcttcatccagtatggggtcaacacag
acagaaactgtgcagcgagtgtgctcgaatcctccatgtgaaacgcatgaaacaggaact
acaaacacggctacaactgccacctcaagcatgggcactaatgaagcccagcagagtggt
gacacagtccaggaagaagccgtaacaacagcttcggctactcctccatctcctcagact
cctgttacgtcctctcctccggcaactctaagttctacacagaaccgagcagtgacaatt
ttgacccagtcaacacccacaccaggtcctgcagtgcccattatttcctccatctcagaa
ggaagttcaattttggagagtgaaattccagaggaagtcacagaacccattcctactgaa
gaagcccagccatctcttgattctgaacaagatcaggatcattctggggctaatcttact
tcagacgatcttcttgatgcttctgaagctatgcagacagagccatctgagtctgaggct
cattctcagtctcaactcctagatgctgcttctgttggagagactactgatactaccctt
catgcacaggatgttgatcttcaggcagccatggaaacacagggtgttcaggaagaacct
gaagaccaaggagaggcaaatcaggcaacaactgatgtagaaccactctctttaccgcag
gaattaatggctgaaacccagccttctacgttaatggtgactggacttacccctgaagaa
ctagcagtcacagctgctgcagaagctgctgctcaggctgcagctacagaagaagcacaa
gcattggcaatacaggcagtactacaagctgcacaacaggctgtaatgagtgcaggggat
gcaatggacacatcagacacggggcatgaaggccagcagacaacaattcctattgtgttg
acacagcaggagttggcagcacttgtacaacagcaacatcaacttcaggaggctcaggct
gctgctgctgcagcagccgcagctgttgcacagcagcaagcaaacacacaacaacaccat
catcaagctgcagctttgcctactgaggctctggcacctgcggatagccttaatgaccca
tcaagtgagagcaatggacacagtgagctggctagtgctgtgacaagtgctgtggctgga
ttacttccagcaaccccaactgaaagtttggctccttccagcacgtttgcccctccacaa
cccattgtggtggccagtccagcaaaaatgcaggctgcagctgccttggctgaggtagct
aatgggattgaatctgcaggtttgaagtcagatacaatgactaccccagccccaacaaaa
gttccagttaagaaggagaaccagtggtttgatgttggtgtcatcaagggaacgaatatg
gtagtgacacactactatttacctgctgatgacacgcctgttggagatgaggacacttct
actattccagactataaccagctaaagaaagtagaacttcagcctggcactgcctacaag
tttcgggtagctggaatcaatgcttgtggcagaggtccctttagtgagatttcagcattt
aaaacgtgcttgccaggctttccaggagcaccttgtgccatcaaaatcagcaagagtcca
gatggagcacacttgacatgggagccaccttcagtaacgtcaggaaagatcatagagtat
tctgtttacttagcaatccagagtgcacaggctggggagccgaagacatctgcccccgcc
caacttgcatttatgcgagtgtattgtggacccagcccttcatgtttggtgcagtcgtcc
agtctttccaatgctcacatagattataccaccaagcctgccattatcttccgcattgct
gcccgcaatgagaagggctatggccctgctacccaagtcaggtggcttcaagagtcaaac
aaagatggcacagcagcaaagcctgcagggaagcgacctgtctcctcctccccagaagtg
aaagcctctggtccaaagaaagtgaagtccgatcagtag
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integrated database retrieval system
