KEGG   Polypterus senegalus (gray bichir): 120542792
Entry
120542792         CDS       T08668                                 
Symbol
si:dkey-13a21.4
Name
(RefSeq) ras-related protein Rab-7a
  KO
K07897  Ras-related protein Rab-7A
Organism
psex  Polypterus senegalus (gray bichir)
Pathway
psex04137  Mitophagy - animal
psex04140  Autophagy - animal
psex04144  Endocytosis
psex04145  Phagosome
psex04148  Efferocytosis
psex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:psex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120542792 (si:dkey-13a21.4)
   04145 Phagosome
    120542792 (si:dkey-13a21.4)
   04140 Autophagy - animal
    120542792 (si:dkey-13a21.4)
   04137 Mitophagy - animal
    120542792 (si:dkey-13a21.4)
   04148 Efferocytosis
    120542792 (si:dkey-13a21.4)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120542792 (si:dkey-13a21.4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:psex04131]
    120542792 (si:dkey-13a21.4)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:psex04147]
    120542792 (si:dkey-13a21.4)
   04031 GTP-binding proteins [BR:psex04031]
    120542792 (si:dkey-13a21.4)
Membrane trafficking [BR:psex04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120542792 (si:dkey-13a21.4)
Exosome [BR:psex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120542792 (si:dkey-13a21.4)
  Exosomal proteins of other body fluids (saliva and urine)
   120542792 (si:dkey-13a21.4)
  Exosomal proteins of colorectal cancer cells
   120542792 (si:dkey-13a21.4)
  Exosomal proteins of bladder cancer cells
   120542792 (si:dkey-13a21.4)
GTP-binding proteins [BR:psex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120542792 (si:dkey-13a21.4)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase Gtr1_RagA GTP_EFTU Septin cobW AAA_7 AAA_24 AAA_5 IIGP nSTAND3 AIG1 nSTAND1 FeoB_N AAA_16
Other DBs
NCBI-GeneID: 120542792
NCBI-ProteinID: XP_039631379
LinkDB
Position
13:complement(72079068..72111859)
AA seq 205 aa
MALWKKVHLKVILLGNSGVGKSSFMNQYVNHRFTNMYRATIGADFLTKEVNVDERNVVLQ
IWDTAGTERFQSLGVALYRGADCCLLMFDVTSAASFQALDIWKKEFAIQADPVEPDKFPF
VVIGNKTDLDHREVSMRQAQDWCRQNNALYFEASAKEAINVEKAFQGAVRVSLQYHKDNK
MDLPSEHFQLTSDERSQASSSKCTC
NT seq 618 nt   +upstreamnt  +downstreamnt
atggcgctttggaaaaaggtgcacctgaaagtcatcctgctagggaactcgggagttggc
aagtcatccttcatgaaccaatatgtgaaccatcgcttcaccaacatgtacagagcaacc
attggagcagatttcttgacgaaagaagtcaatgtggatgagaggaatgtggtgctgcag
atttgggacacagctgggacagagcgtttccagtcactcggtgtggctttgtaccgagga
gcggattgctgcctgcttatgtttgatgtcacttcagccgcatccttccaagccctggac
atctggaagaaagagtttgcaattcaagcagatcccgtagaacctgacaaatttcctttt
gtagttattggtaataaaacggacttggatcaccgggaggtttccatgaggcaggcccag
gactggtgccggcagaacaacgcgctgtactttgaggcgagtgccaaagaggccatcaat
gtggagaaagcattccagggagcagtgcgggtgtcccttcaatatcacaaggacaacaaa
atggacttgccttctgaacattttcaacttacctctgatgaaagaagccaagcatcttcg
tcgaagtgtacgtgttga

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