Polypterus senegalus (gray bichir): 120542866
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Entry
120542866 CDS
T08668
Symbol
thoc3
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03013
Nucleocytoplasmic transport
psex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120542866 (thoc3)
09122 Translation
03013 Nucleocytoplasmic transport
120542866 (thoc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120542866 (thoc3)
03041 Spliceosome [BR:
psex03041
]
120542866 (thoc3)
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
120542866 (thoc3)
Spliceosome [BR:
psex03041
]
Complex C
Other components
EJC/TREX
120542866 (thoc3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
120542866 (thoc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
WD40
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_WDR36-Utp21_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
eIF2A
Beta-prop_Vps41
Beta-prop_NOL10_N
DSE1_N
WD40_RFWD3
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
RMC1_N
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
Tricorn_2nd
NBCH_WD40
WDR90_beta-prop_4th
PAC11
B-prop_COPA_B_2nd
TRM82_WD
Beta-prop_ACSF4
Beta-prop_NUP159_NUP214
Beta-prop_WDR75_1st
PD40
ASA1
Beta-prop_SPT8
Beta-prop_EIPR1
Peptidase_S9_N
Beta-prop_WDR11_1st
Beta-prop_Nup120_160
Beta-prop_ELP1_1st
Cytochrom_D1
YNCE
Beta-prop_SCAP
PROPPIN
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
120542866
NCBI-ProteinID:
XP_039631502
UniProt:
A0ABS2YZ24
LinkDB
All DBs
Position
13:63514096..63529916
Genome browser
AA seq
322 aa
AA seq
DB search
MASQYYQEMQEIFRNYSKSREFPAHTAKVHSVAWSCDGKRLASGSFDKTASVFVLEKDRL
VKEDTYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTIKCVTAINTKGENINICW
SPDGQTIAVGNKDDVVTFIDAKTHRSRADEQFKFEVNEISWNNDNDMFFLTNGNGCINIL
SYPELKPIQSINAHPSNCICIRFDPMGKYFATGSADALVSLWDVEELVCVRCFSRLDWPV
RTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAYACDDK
DGKYDSGRESGTVKLFGLPGDS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctcaatattaccaagagatgcaagaaatcttcagaaattacagcaaaagccgc
gagtttcctgctcacacagcaaaggtgcattcagtcgcatggagttgcgacgggaagaga
ctggcgtcaggttccttcgataaaaccgccagcgtatttgtattggaaaaagaccggctg
gtcaaagaagatacataccgtggccatggagatagtgtggatcagctgtgttggcatcca
agcaacccagacctctttgttacagcatctggagacaagacaattcgcatctgggatgtt
cggactataaaatgtgtaacagcaattaatactaaaggtgagaatattaatatttgctgg
agccctgacgggcagacaattgctgtggggaataaggatgacgttgtcacatttattgat
gcaaagactcatcgatcaagagctgatgagcagtttaagtttgaagtgaatgagatctct
tggaataacgataatgacatgtttttcctaaccaatggaaatggctgtattaatatcctg
agctatccagaattaaagcctatccagtcaatcaatgcccatccctccaactgcatctgc
atcagatttgatcctatgggaaaatactttgcaactggcagtgctgatgccctagttagc
ctttgggatgttgaagagttggtgtgtgttcgctgcttctcaagacttgactggcctgta
agaactctgagttttagtcatgatggaaaaatgctggcctctgcatctgaagaccatttt
atagatattgcggaagtggaaacaggagagaagctatgggaagtacagtgtgaatcacca
acattcacagtggcctggcatcccaagagacctttattggcatatgcatgtgatgacaaa
gatggaaaatacgacagtggtcgagagtctgggactgtgaaactgtttggtttacccggt
gactcctaa
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