Polypterus senegalus (gray bichir): 120542909
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Entry
120542909 CDS
T08668
Name
(RefSeq) synapsin-1-like isoform X1
KO
K19941
synapsin
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120542909
Membrane trafficking [BR:
psex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120542909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
DUF7138
Motif
Other DBs
NCBI-GeneID:
120542909
NCBI-ProteinID:
XP_039631568
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Position
13:80575319..80878305
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AA seq
743 aa
AA seq
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MNYLRRRLSDSNFMSNLPNGYMSDLQRPDPPQPSPAVSPAPPERRQSTSQSGGGGFFSSI
SNAVKQTTAAAAATFSEATSGSSGASRAKILLVVDDQSTDWAKFFRGKKVNGEFEIRVEQ
AEFSELNLVAHATGSYSVDIDALRNGAKVTKSIRPDFVLVRQHAFSMAKNGDFRNIVIGL
QYAGLPGVNSLHSVYNFCDKPWVFSQLTRLYKKLGPDDFPLIEQTYYPNHKEMITTPKFP
VVVKMGHAHSGMGKVKVDNHYDFQDIASVVALTKTYATSEPFIDAKYDVRVQKIGNNYKA
YMRTSISGNWKTNTGSAMLEQVAMSDRYRLWVDSCSELFGGLDICAVEALHGKDGKDYII
EVVGCSMPLIGEHQDEDRGLIADLVLSKMNQTMARTPIPSPVRPPTAQTAQTAQPTMQQA
VSPQPAQAQQRLPGAQQGPPAQQRPPPQGGPQQPPQSSQGVRQGPPSQQRPPPQGQPIQG
LSQPPPQQQQQRAPSPSTQHPTSPAPVQQQRQPSPGGGGQAGPPQQRQPGPGAQQPQQKP
SSGQGSPQRSQSGSPQMQRQQPAPSQQQPQQRPTGASVQKPIGVQQQQRPPQQRSQGQGA
QPQPPRQPTQGVPQASQQQQQRASSQGPPPQQQGRPMAPTTQQPRPSAQGQGGPLGMGGP
GSVGNRPPVQQKPLPPQKPSQEQSQGMGLPSQPHPQLNKSQSLTNAFNIPETSATPRSSL
SQDEVKAETIRSLRKSFASLFSD
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgaattacctgcgccgccgcctgtctgacagtaatttcatgtccaacctgccgaatggc
tacatgagcgacctgcagaggccagatccccctcaacctagtccagccgtgtctcccgcc
ccccccgagcgccgccagtctaccagccagtccggtggtggaggcttcttctcctccatc
tcgaatgccgtgaagcagaccaccgccgcggcagctgccaccttcagcgaagccacctct
ggcagcagcggggcgtcccgtgccaaaatcctgctggtcgtggacgatcagagcaccgac
tgggccaagttcttcaggggaaagaaggtgaatggggaatttgagatcagagtggagcag
gcagaattttctgaactcaacctggtggcacatgcaactggcagctattcagtggacatt
gatgcactccgcaatggcgccaaggtcacaaagtccatcaggccagattttgtcctggtt
cgtcagcatgccttcagcatggcaaagaacggcgacttccgcaacattgtcattggactg
cagtatgctggactgcctggtgtcaactccctgcactccgtgtacaacttttgtgacaag
ccctgggtgttttctcagctgaccaggctatataagaagctgggaccagatgacttcccg
ctgattgaacagacctactatccaaaccataaagagatgatcacaactccaaagtttcca
gtggtggtgaaaatgggacatgcgcactccggcatgggaaaggtgaaggtggataatcac
tatgacttccaggacattgctagtgtggtggctctgaccaagacgtatgccacatctgag
cctttcattgatgctaaatatgatgtgcgtgttcaaaagattggcaacaactacaaagcc
tacatgagaacgtccatttctggaaactggaaaaccaatacaggatctgcaatgctggag
caggtggcaatgtctgacaggtatagactgtgggtggattcctgctcagagctgtttggg
ggccttgatatttgtgctgtagaggctctccatggaaaggatggcaaagattacattatt
gaggtggtcggctgctctatgcctctcattggagaacatcaggatgaagaccgtggtctc
atagcagacctggttctcagtaagatgaaccagaccatggcgagaacaccaattccatct
ccagttcggccgcctacagcccagacagcccagacagctcagcccacaatgcagcaagct
gtctcacctcagcctgcccaagcacagcaaagacttcctggtgcccagcaaggaccccca
gcccagcagcgtcctcctccacaaggtgggcctcaacagcctcctcaaagttctcaaggt
gttcgtcaaggccctccctcacagcagagaccaccacctcaggggcagccaatacaaggc
ttaagtcaaccaccaccccagcagcagcagcagagagctccaagccctagcacccagcac
cctacatctccagccccagtacagcagcaaaggcagcctagtcctgggggtggaggccaa
gcagggccaccacaacaacgacagccaggaccaggtgctcagcagccacagcagaaacca
tcatctggtcaaggatcaccacaaagaagtcaatcaggatctcctcagatgcaaaggcag
cagcctgccccatctcagcaacagccacaacagaggccaactggtgcatcagtgcagaaa
cccattggggttcagcaacagcaaaggccaccacagcaaaggtcacaagggcaaggggca
cagccacagcctcctcgacagcccacacaaggggttccacaagcctctcaacagcagcaa
cagagggcatcatcccagggtcctccaccacagcaacagggtagacccatggcacccaca
actcagcagcctcggccttcagctcaagggcaagggggtcccttaggaatgggaggtcct
ggaagtgtagggaaccgccctcctgtacagcaaaaaccattgcctccacagaagcccagc
caggaacagagccaaggaatgggattgccttcgcagccgcatccccaactcaacaaatcc
cagtctcttaccaatgccttcaacattccagaaacctcggcgactccccgttcaagcctt
agccaggatgaagtgaaggccgagaccatccgcagcctgcgcaagtcctttgcgagtctc
ttctcggattga
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