Polypterus senegalus (gray bichir): 120543019
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Entry
120543019 CDS
T08668
Name
(RefSeq) serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03015
mRNA surveillance pathway
psex04261
Adrenergic signaling in cardiomyocytes
psex04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120543019
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120543019
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
120543019
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
psex01009
]
120543019
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psex03019
]
120543019
03036 Chromosome and associated proteins [BR:
psex03036
]
120543019
Protein phosphatases and associated proteins [BR:
psex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
120543019
Messenger RNA biogenesis [BR:
psex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
120543019
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
120543019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
120543019
NCBI-ProteinID:
XP_039631769
LinkDB
All DBs
Position
13:complement(6394035..6592890)
Genome browser
AA seq
449 aa
AA seq
DB search
MLAGLGGTSSDLQWRFSQVKGAEELNVTEADIISTVEFNHTGELLATGDKGGRVVIFQRE
QESKNQPHRRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQQNAAYFLLSTNDKT
VKLWKVSERGRRPEGYNLKDDDGRIRDPSTITMLRVPVLQPMDLMVEATPRRVFSNAHTY
HINSISVNSDYETYMSADDLRINLWNLEITNRSFNIVDIKPANMEELTEVITAAEFHPNQ
CNTFVYSSSKGTIRLCDMRAAALCDKHSKFFEEPEDPSNRSFFSEIISSISDVKFSHSGR
YMMTRDYLTVKVWDLNMESRPLETYQVHDYLRSKLCSLYENDCIFDKFECVWNGSDSVIM
TGSYNNFFRMFDRNTKRDVTLEASRENSKPRAILKPRKVCVGGKRRKDEISVDSLDFSKK
ILHSAWHPTENIIAVAATNNLYIFQDKVN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctggccggactcgggggcacctcgagcgacctgcagtggcgcttctcacaggtaaag
ggcgccgaggagctcaacgtcaccgaagctgacataatctccacggttgaatttaaccac
acaggggagttgctggcgactggagacaagggcggccgtgtggtgatcttccagcgcgag
caggagagtaaaaaccagcctcaccggcgaggggagtacaatgtttacagcacctttcag
agccacgagcccgaattcgattacctgaagagtttggagatcgaggagaagatcaacaaa
atccgatggctgccccagcagaacgccgcctacttcctgctctccaccaacgacaagacg
gtgaagctatggaaggtcagcgagcgcggcaggaggccagaaggctacaatctcaaggac
gatgacggccgcattcgagacccttctaccatcaccatgctgcgggttcctgttctgcag
cccatggacttgatggtggaggccacaccgcggcgggtcttctccaacgcgcacacgtat
cacatcaactcgatatcggtgaacagtgactacgagacgtacatgtcggccgatgacttg
aggatcaacctgtggaacctggagatcaccaacaggagcttcaacattgtggacatcaaa
ccggccaacatggaggagctgaccgaggtgatcacggcggccgagtttcacccaaaccag
tgcaacacgtttgtgtacagcagcagcaaaggaaccattcggctgtgcgacatgagggcc
gccgcgctgtgtgacaagcactccaagttcttcgaagagcctgaagaccccagtaacagg
tccttcttctccgagatcatctcctccatctcggacgtcaagttcagccacagcgggcgg
tacatgatgacccgggactaccttactgtaaaagtgtgggacctgaatatggagagccgg
ccgctggagacatatcaggtgcacgactatctcagaagcaagctgtgctccctttacgaa
aacgactgcatctttgataaatttgaatgtgtgtggaacggctcggacagtgtcatcatg
accggctcctacaacaacttcttccgaatgtttgaccgcaacaccaagcgggacgtcacg
ctggaagcttcccgggagaacagcaaaccccgagccatcctgaagccccgcaaagtgtgc
gtggggggcaagcggcggaaggacgagatcagcgtggacagcctggactttagcaaaaag
atcctacacagcgcctggcacccgacggagaacatcatcgccgtggccgccaccaacaac
ctgtacatattccaggacaaggtgaactag
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