Polypterus senegalus (gray bichir): 120543072
Help
Entry
120543072 CDS
T08668
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120543072 (fgd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_11
FYVE_2
PH_13
RHG20_PH
C1_1
zf-KKT2_KKT3
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
120543072
NCBI-ProteinID:
XP_039631856
LinkDB
All DBs
Position
13:complement(71259068..71452184)
Genome browser
AA seq
971 aa
AA seq
DB search
MHLNRPKSAFINCSPPVSPTDQPGSYSHQFKTMRFSYHIRGGMPSPQQSLRRSGSTSSPR
VLTKSLSLEPGPCAGGRETPHRLCSDPGPFSPEDCNGTSEKPAPKPKPLPSGPKPQVPPK
PAHLQSGNRPRGNEQHIPPPPSRPLPADPRGGRGTLSRLDSAPAPSCVLSLIEKFEREQI
ILVPDSSGLLPCLPRVPDPSLDVSSTTESTPINPSDCQAVQGSETEVISASADVPDSVIH
QPPNSKRRLSAESGYSTADKLSDALEMKDLLADQSGYSTDCSERLSLPSGGLLPQTDSKL
ANRDSGIDSISSPSHSEELCFAGEEDRERERAATPLQSLPSVSAVGRGRPSSSVRDREHD
SEGDSDLEEGSGDESEATLPPKAERQDSIELSAQQKVFNIANELLLTEKAYVARLHLLDK
VFCAQLMEEARTRNSFPADVVMGIFSNICSIYCFHQQFLLPELEKRMQDWESNPRIGDIL
QKLAPFLKMYGEYVKNFDRAMELVNSWIERSSQFKAIIHNIQREAVCGNLTLQHHMLEPV
QRIPRYEMLLKDYLNKLPSDSPDVKDAEKSLELIATAAEHSNAAIQKMERMHKLLKVYEL
LGGEEDIVNPTNELIKEGHILKLSAKNGTTQDRYLILFNDRLLYCVPKLRLIGQKFGVRA
RIDVAGMEVKETGSANSSKTFIVSGKQRSLELQTGTEEEKRDWIQAIQATIQMHVQTLET
LKVLNSSLREEDYTPPNSPNTDLGKRAPTPIREKEVTLCMKCQESFNSITKRRHHCKACG
YVVCGKCSEFRARLLYDNNRPNRVCIDCYTMLHGAPPSPGCPGQAPQRRKSILEKQASVV
AENSVLCSYMHYMEKGSGKGWQKAWFVIPENEPLVLYVYGAPQDVKAQRSVPLIGFEVAL
PDSSDRLDRRGAFKISQSHLTLYFSAESEGLQHRWMEVLSRAGRGEEFSGHASILEAEEE
GLEATSVEENT
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgaaccgaccaaagagcgccttcatcaactgctctcctcccgtgtctcccact
gaccagcctggatcctactcccatcagttcaaaaccatgcgcttctcttaccacatccga
gggggtatgccgagcccccagcagtcgctacgcaggtcaggctctacctccagcccaagg
gttctaaccaagagcctttccctggagccaggcccctgtgcaggaggaagggaaacccca
catcgcctctgctcggaccctggacccttcagccccgaggactgtaacgggacaagtgag
aagccagcgccaaagccgaaaccgctgccttcagggcccaagccacaggtacccccgaag
ccagcacatctgcaaagtggaaaccggccaagaggcaacgagcagcacatccccccaccg
ccgtcacgacccctgcctgcagacccacgaggaggacgggggaccctttcccggctggac
tctgcgcctgcaccctcctgtgtgctgtcactcattgaaaagtttgaaagagagcagatc
atcctggtcccggacagcagcggcctcttaccatgtcttccacgagttcccgatcccagt
ctggatgtgagttccacgacagaaagtactcccatcaacccttcagactgccaagctgtg
caaggtagtgaaacagaagtcatctctgcctctgcagatgttccagattcggtcatccat
cagccccctaattccaagagacgcctgtcagctgaatcgggttacagcacggctgacaag
ctttcggacgcgctggagatgaaggacttgttggcagaccaatctggatactctacggac
tgctcggaacggctgagtctaccctcagggggccttctgcctcagacggacagtaaactg
gccaacagggacagtggcatcgacagcatcagctcaccgtcgcacagtgaggagctgtgc
ttcgcaggagaggaggacagagagagggagcgggcagccactcctttacagagcctgcca
tcggtcagtgctgtgggacgtgggcgtccgtcaagcagtgtcagggacagggagcatgat
tctgagggggacagcgatctggaagaaggcagcggagatgaaagcgaagcaactctgcca
cccaaagccgagaggcaggactccattgagttgtccgctcagcagaaagtgttcaacatt
gctaatgagctgctcctgacagagaaggcctatgtggctcggctccacctgctggacaag
gtgttctgtgcccagctgatggaggaggctcgaactcgcaattctttccctgctgatgtt
gtgatgggaatcttttccaacatttgttcaatctactgtttccatcaacagttcttgttg
ccagagctggagaagcgcatgcaggactgggagtcaaatccccgaattggagacattctt
cagaagttggcacctttcttgaaaatgtatggcgagtatgtaaaaaattttgaccgtgcc
atggagcttgtcaactcctggatagaaagatcgtcacaattcaaagccatcattcacaat
atccagagggaggctgtttgtggaaatctaaccttgcagcaccacatgttggagcccgtg
cagaggattccacgctatgaaatgctcctcaaggactacctgaacaagcttccatctgac
tcccctgatgtgaaggatgctgaaaagtccctggagctgatcgcaactgccgctgaacat
tccaatgcagccattcagaaaatggagcgtatgcacaagcttctcaaagtctatgagcta
cttggcggagaagaagacattgtgaatcccactaatgagctaattaaagaaggacacatc
ttgaaactctctgccaagaatgggactacacaggaccgctatctcatactgttcaacgac
aggctactgtactgtgttcccaagttacgtctaattggtcagaaatttggtgtgcgtgcc
aggattgatgtggcaggaatggaggttaaagaaacgggcagtgcaaattcctcaaaaacg
ttcatagtgtccggaaaacaaaggtccttggaactgcagacgggaactgaagaggagaag
agggactggattcaggctatccaagctactattcagatgcatgtccagactttggaaact
ctgaaagttctcaacagttccttaagagaagaagactacactccacccaactcgcctaac
acagacctgggtaaaagagctccgacccccattagagaaaaggaagtgacgctgtgtatg
aaatgccaagaatcctttaactccattacaaagaggaggcaccactgcaaggcctgtgga
tatgtggtttgtgggaagtgctcagagttccgggctcgcctgctctatgacaacaatcgc
cctaatcgggtgtgcattgattgttatactatgctacatggagccccacctagccctgga
tgtcctggacaagcccctcaacggcgcaagtcaattctggagaagcaggcctcagtggta
gccgagaacagtgttttatgcagctacatgcactacatggaaaagggcagtggcaaaggc
tggcagaaagcctggtttgttattccagaaaacgagcctcttgtcctgtacgtctatggc
gccccccaggacgtgaaagcccagcgtagcgtaccactcattggatttgaggtagcgttg
cccgattcttcagacaggctggaccggcgtggtgccttcaagataagccaaagtcacttg
acgctgtacttcagtgccgagagtgagggattacagcatcgctggatggaagtgttgtcc
agagctggtcgaggagaagagttttcaggacacgcatccatcttggaggcggaagaagaa
gggttagaggccacatctgtagaggagaatacgtga
DBGET
integrated database retrieval system
