Polypterus senegalus (gray bichir): 120543104
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Entry
120543104 CDS
T08668
Symbol
srebf1
Name
(RefSeq) sterol regulatory element-binding protein 1 isoform X1
KO
K07197
sterol regulatory element-binding transcription factor 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120543104 (srebf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120543104 (srebf1)
04131 Membrane trafficking [BR:
psex04131
]
120543104 (srebf1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
120543104 (srebf1)
Membrane trafficking [BR:
psex04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120543104 (srebf1)
Autophagy
Mitophagy
Other mitophagy associated proteins
120543104 (srebf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
ZapB
Motif
Other DBs
NCBI-GeneID:
120543104
NCBI-ProteinID:
XP_039631891
LinkDB
All DBs
Position
13:153315877..153341583
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AA seq
1123 aa
AA seq
DB search
MEPLPFDDASLYTLDASLVLNEPNDIDCALLNDIDDMLQLINSHDVEFPSLFDHQSFVTM
QDTPPPLLPPPPPPVQAPSSSPLLDGLLGPSSKPAKSPILEGSKVFQPSPPQPAAPPVIP
ATAPPGSSSPRHLVKLDQSPKQQSPPPPARPQQSVQPSPPAAPIMTSGFQTAAPFTPQQP
HLIGYQPSGGFSAVQSVGTSQPMPNILASPQQIQSVTIPASQLLATTASSTSSTVSPVLL
QPQFIKADSLLLTTLKPDGSSLVTAVKSPCITTLSTSNSPGHNASIQALVSGGTILTTVP
LMVDADKLPINRIPANGKLSSLPNKGEKRTAHNAIEKRYRSSINDKILELKELVVGKEGK
LNKSAVLKKAIDYIRYLQQANQKLKQENLALKMVAQKNKTLKDLVASAGISMEMEVDGIK
AEMLTPPPSDAGSPSNSSHFSNCSSDSEPDSPLCDDAKTSHKQEMPCSTLMGMLDRSRIA
LCIFTFLFLTFNPLSSVIKPSTGLSESSSFQGPGRNMLGFQSAADNLGWLDWMLPTLFLW
LLNGVLVLLLFIRLFVYGEPVTRMHSGSSVLFWRHRKQADLELARGDYAQASQNLWMCLK
ALGRPLPTSHLDLACSLLWSMLRLILQRLWLGRWLAGRAGGLSRDQQLQEDVRRSSRDAA
LVYHKLNQLHMTGKLPGSNLAAINMALSAVNLAECAGETISVATLAEVYVLAAMRIKSSL
HRTLHFLTRFFLSSARQICLSPSGTVPPAMQWLCHPLGHRFFVDGDWTVRSTPRESIYSL
AGNSIDPLAQVTQAFREHLLDRALYCIAKPESNEVQAEGAGEFSDALQYLQLLNSCCDAA
GTTAQTFAIGSSVTTSTGTDPLAKWWTSLVVVAVNWLQGDDEAAERLYAVVDYMPKALHG
NENPLPRAALCTFRSVRTLLSSQENNQLTLAHCDKASGYLKESLSIVPLGSIDKVMQLLL
CDLLLVTRTSFWQQQRPSLGNSLQVSPLELCGFQQDLSTLRRLSQSFRPAMRRLFLHEAT
ARLMAGASPTRAHQLLDRSLRRRTTPTRRAGELASCPGKREQAEAVLLACRHLPPSFLSA
PGQRVGMLVDAARTLERLGAKRTLHDCQQMIIKLGSGTTVAST
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggagcccctaccgtttgatgatgcttccctgtacactcttgatgccagccttgttctt
aacgagccaaacgacatcgactgtgctttgctgaacgatatagatgatatgctacagctg
attaacagccatgatgtggagtttcccagcctgtttgaccatcagtcatttgtgacgatg
caggacacgccaccccctcttcttcctcctcctcctcctcctgtgcaagcaccaagcagc
tccccgctcctggatggcttgctggggccttccagtaagccagcaaagagccccattctg
gaaggcagcaaggttttccagccgtcaccaccccagcctgctgcccccccagtcattccg
gccacagcacctcctggctcttcttccccccggcaccttgtcaagctggatcagagcccc
aagcagcagagtccaccaccgcctgcacgaccacaacagtctgtacagccaagtccccct
gctgcgcccataatgacttcaggctttcagacagctgccccgtttaccccacagcagccg
catctgattggttatcagccctcgggtggcttttcagcagtgcagtcggtaggtaccagt
caaccgatgcccaacatcttggcttctccgcagcagatccagtccgttacaatccctgct
tctcagcttctggccacaaccgccagttccacttcatccactgtctctccagtgcttctg
cagccccaattcatcaaggccgattcgctgctcttgacgacactcaagccagacggcagc
tccttggtcactgcagtcaaatctccatgcatcaccactctaagcacgtctaactcccca
gggcataacgcttctatccaggcgctggtcagtggcggtacaattctcaccacagttcct
ttgatggtggatgctgacaaactgcccattaacagaattcctgccaatggcaagctgtcg
agcctgccgaacaagggggaaaagcgcactgcacacaatgccattgagaagcgctaccgc
tcatcaattaatgacaagattctcgaactcaaagagttagtggtggggaaggagggcaag
ctcaacaagtcggctgttctgaagaaagccattgattacatccgctacctgcagcaagcc
aatcagaagctaaaacaagagaacctggcactaaagatggtggctcaaaagaacaaaaca
cttaaggacctggtggcatcagctgggatctccatggagatggaggttgacgggattaaa
gctgaaatgctgactcctccaccttcagatgctggctccccttctaacagcagccatttc
tcaaactgcagcagtgactctgaaccagatagccccttatgtgatgatgcaaagacctcc
cacaagcaagagatgccttgctctactctcatgggcatgctggatcgctcccggattgca
ctgtgcatcttcaccttcctcttcctcacattcaatccgttgtcatctgtaataaaacct
tcaacaggcttgtctgagagcagcagttttcaaggccctgggagaaacatgctggggttc
cagtctgcagcagacaaccttggctggcttgactggatgctgccgacactcttcctctgg
ttgcttaatggtgtactggtactgctcctcttcatcaggctatttgtctacggtgaaccc
gtcacccgtatgcattcgggatcttcagtgctcttttggaggcatcgcaagcaggcggac
ctcgaattggccaggggtgactatgctcaggcttcccaaaacttgtggatgtgcctaaag
gctttaggccgccccctgcccacctctcatctggacctggcctgtagtctgctgtggtcc
atgttgcggctgattctgcaacgtctttggctggggcggtggctggcaggacgcgctgga
ggtctgagtcgtgaccagcaattgcaagaggatgtgcggaggagctcacgagatgctgct
cttgtgtaccacaagctgaatcagctgcacatgacaggaaagctccctggcagcaacctg
gcagcaatcaacatggccctgagcgccgtcaacttggctgaatgtgctggcgagacaatc
tccgtggcaacattggctgaagtctatgtactggcagcaatgcgtatcaaaagtagcctg
cacaggacgctgcatttcttaacgaggttcttcttgagcagtgccaggcagatctgttta
tctcccagtggcacagtgcctccagccatgcagtggctctgccacccccttgggcaccgc
ttcttcgttgatggagactggactgtgcgcagcacaccccgagagagcatctacagcttg
gcaggcaactcaatcgatcctttggctcaggtgactcaggcctttcgggagcacctgctc
gaccgagccttgtactgcatcgccaaaccagaaagtaatgaggttcaggctgaaggggca
ggagagttttctgacgctctgcagtacctgcagctcctgaacagctgctgtgacgccgca
ggaaccactgctcagacgttcgccattggatccagcgtgaccaccagcacagggactgat
cctttggccaagtggtggacgtctctggtggtggtggcagtgaactggttacagggcgat
gacgaggcagccgagcgcctctacgcagtggtggactacatgcccaaggctctgcatggc
aatgagaaccccttacctcgggcagcactctgcaccttcaggtctgtacgcacccttctg
tccagccaggagaacaaccagttgacgctggcacactgcgacaaggccagtgggtaccta
aaagagagcctgtccatagtgccccttggcagcattgacaaggtgatgcagttgctactt
tgtgacctgctccttgtcaccaggacgagtttttggcagcagcagcgtccatcgctgggt
aactccttgcaagtgtcacccttggagctgtgtggcttccagcaggatttgagtacgctc
cgtcggctgtctcagagcttccggccagcaatgcggagactctttctgcacgaggccaca
gctcggctcatggctggcgccagtcctactcgggctcaccaactgctggaccgtagcctg
cggagaaggaccacaccgaccagaagagcaggagagctggcgtcgtgccctggaaaacgc
gagcaggcagaagcggttctgcttgcctgccgtcatctccctccttccttcctctctgcg
ccagggcaacgtgtcggaatgctagtggatgccgcccggaccttggagaggctcggtgct
aagaggacacttcacgactgtcaacaaatgatcatcaaactgggcagcggcacaactgtg
gcatccacatag
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