Polypterus senegalus (gray bichir): 120543130
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Entry
120543130 CDS
T08668
Symbol
rhbdl1
Name
(RefSeq) rhomboid-related protein 1 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120543130 (rhbdl1)
Enzymes [BR:
psex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
120543130 (rhbdl1)
Peptidases and inhibitors [BR:
psex01002
]
Serine peptidases
Family S54: Rhomboid family
120543130 (rhbdl1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
DUF5580_M
DUF5580
Motif
Other DBs
NCBI-GeneID:
120543130
NCBI-ProteinID:
XP_039631947
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All DBs
Position
13:152798088..152874972
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AA seq
372 aa
AA seq
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MDRSSLFKLIQEQLDPENTGFIAVENFTNLVEHHELQLDPSKLEMLFALVQSNEEGQVCY
QELIELLSSKRSSSFRKAIANGRRTLQREILLDETGLGIYKRFVRYVAYEILPCENDRRW
YFHQNRFCPPPVFMAVITVVQIIVFICYGAKLNKWVLQTYHPDFMKSPLVYHPGHRAQVW
RFFTYIFMHVGLEQLGFNALLQLVIGVPLEMVHGLVRISLLYIAGVLAGSLTVSITDMRA
PLVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSSPQPSFMAHLSGAVVGISMGLLILRSYEESLQRQCSWWVIIFSFATFLIFAIFWNIFA
YELLGVQIPLPP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagttccctgtttaagctcatacaggagcagctggatccagagaacaccggt
ttcattgcagtggagaattttaccaacttggtggagcaccatgagttgcagctcgatccc
tccaaacttgagatgctttttgccttggtgcagagcaatgaggaggggcaagtatgctac
caggagttgattgaactactcagtagtaagcgctccagcagttttcgcaaagcaattgcc
aatggtcgacgtactttgcagagagaaatcctcctggatgagacagggcttggcatttac
aagcgatttgtgcgctatgttgcatatgaaattctaccctgtgaaaacgatagacgctgg
tacttccatcagaatcgtttctgcccaccgcctgtcttcatggcagtcatcacagttgta
caaatcattgtgtttatttgctatggtgccaaactcaacaaatgggttctccaaacatac
cacccagacttcatgaagagtccacttgtttatcatcctggacatcgggcccaggtgtgg
agattcttcacttacatcttcatgcatgttgggttagagcaacttgggttcaatgccctt
ttgcagcttgtcatcggagtaccactcgagatggttcatggccttgtgcgcataagcctt
ctgtatattgctggtgtattagcaggctccctgacagtctccatcactgatatgagggct
ccattggtggggggatccggcggagtctacgctctctgctcagcacatcttgctaacgtt
gtcatgaactgggctggaatgcgctgtccatacaaactacttcggatgatcttggctctt
gtttgcatgagctcagaggtgggtcgtgcagtatggcttcgtttttcccctccattgccc
tcatcaagccctcaacccagtttcatggcacatttatctggagctgtggtagggatcagt
atggggcttctcatcttacgcagctatgaagaaagccttcagcggcagtgttcctggtgg
gtcattattttctcctttgccacattcctcatctttgctatcttctggaatatctttgcc
tatgaactgctgggggtgcaaatcccactccctccttaa
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