Polypterus senegalus (gray bichir): 120543179
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Entry
120543179 CDS
T08668
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120543179 (lrsam1)
04121 Ubiquitin system [BR:
psex04121
]
120543179 (lrsam1)
Enzymes [BR:
psex01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120543179 (lrsam1)
Membrane trafficking [BR:
psex04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
120543179 (lrsam1)
Ubiquitin system [BR:
psex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120543179 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_1
LRR_4
SAM_1
SAM_2
Prok-RING_4
LRR_LRWD1
Diphthami_syn_2
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
120543179
NCBI-ProteinID:
XP_039632036
LinkDB
All DBs
Position
13:complement(3121174..3138712)
Genome browser
AA seq
720 aa
AA seq
DB search
MPLFFRKKKPSEDAKKRLEYQLCLAREAGADDILDISACELTEIPASAFSTCKVLQKKVF
IVHDNQLRSLVPRNCSITDLSTLKVLDVHGNSLTSLPDDIGQLRSLQILNLEKNRLQNLP
ESIGELGQLQTLNVRGNCLCQLRPALGRLGSLRSLDVSENGVRELPVELGHIRTLETLTL
DATLMAFPPAGVCSGGTESIQRFLCAELGTEYCPPSQYLLPVLENEEVDPKEDIDRWNRQ
VQDQVDAGWQNKFQAYEKKKEQKTQEKLEFERRLGEEQREQAQLVLLSSSHKEDMLESIK
QEQQRLEDGVSQQQRALQVERQRLLEQLRLAEEGISERIELLLLEGQRQKEESPLFQDLE
NERLRLERLMAITQEEAESLRRKEVAAAMQQMLSESYSIQLIQEACESRRQRLVSETYSS
MEQLDKNFERVLSLQHLDQSRAISRILQEAEMQKVAFEALQLQRDGAHRYIRRQIRLIES
ELMQLTRLEVKRRDLDAETLQEVLSEQRRALSDLLQQLLKQKDQREGELRDILVEMQLKS
EAAQENFWLIQYQRLLDSKPLSLQVQEAGLPQELVDLLRQLSAQQYLPILAHHRVTQESL
RGMTPADLLKLGIVEVGVQHSLLAWARALPSSPLAERVKPEEVPTPAPSAPSLPLTPPSA
QDKRHTEAEHMECVVCMENESQVVFLPCGHICCCLPCSEVLRSCPLCRSDIAQHIRIYRL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgttcttcaggaagaagaagccaagtgaggatgcaaagaagaggctggaatat
cagctgtgcctggccagggaggcgggtgctgacgacattttggacatttctgcctgtgag
ctcacagagattcctgccagcgctttctccacgtgtaaggtgttgcagaagaaggtcttc
atcgttcacgacaatcagctgagaagcttagtgccgcggaactgcagcattacagatctg
tcaacgctgaaggtcctggatgttcatggaaacagcctgacgtcgctgccagatgacatc
ggacagctgcgctctttgcagatcctgaacctcgagaagaatcgactgcagaacctcccg
gagtccattggggagctcggccaactgcagactcttaacgtccgaggaaactgcctgtgc
cagctgaggcctgctctgggtcgtctgggcagcctgcgcagtcttgacgtcagtgaaaat
ggagtgagggagctgcccgtggagttgggccacatccggaccttggagactttgactttg
gacgcgactctcatggccttcccgccggctggcgtctgctctggtggcactgagagcatt
cagcggttcttgtgtgcagagctgggcaccgagtactgccccccgtcccagtacctgctg
cctgtgttagagaacgaggaggtggacccaaaggaggacattgacagatggaacagacaa
gttcaggaccaagtggatgctggttggcagaacaaattccaggcctacgagaagaagaag
gagcagaagacgcaggagaaactggaatttgagcgacggctgggggaagagcagagggag
caggcgcaactcgttctgctgagcagctcgcataaagaagacatgctggagtccatcaag
caggaacagcagcggctggaggatggagtgtcacaacagcagagggcgctgcaggtggag
cggcagaggttactggagcagctcagactggcagaggagggcatcagtgagagaattgag
ctgctgctgctggagggtcagaggcagaaagaagagtcgccgctctttcaggacttggaa
aatgagaggttgcgacttgagaggttgatggcaatcacgcaggaggaggccgagtcactg
cgcagaaaggaggtggcagcggccatgcagcagatgctgtctgaaagttattccatccaa
ctcatccaggaggcgtgcgagtcccgtcggcagaggctcgtctccgagacttactccagc
atggagcagttggacaagaattttgagcgcgtgctgtccctgcagcacctcgatcaaagc
cgagccatcagtcgcatcctgcaggaggcagaaatgcagaaggtggcatttgaagcgctg
cagcttcagcgagacggggcacacagatacatcaggaggcagattagactaattgagtcg
gaattaatgcagctgacaaggctggaggtaaagagacgtgatctggacgcggagaccctg
caggaagtcctgtcggagcagcggcgcgccctgagtgacctgctgcagcagctgctgaaa
cagaaagaccagcgcgagggcgagctgcgggacatcctggtggagatgcagctgaagagc
gaagctgcccaggagaacttctggctgattcagtaccagaggctgctggactccaagccg
ctgtccctgcaggtccaggaggccggccttccccaggagttggtcgacttgctccgccaa
ctttctgctcagcagtatttgcccattctggcccaccacagagtgacgcaggagagcctg
cgtggcatgacacctgctgacctccttaagctgggtatcgtcgaggtaggagttcagcac
tccctgctggcatgggcacgtgcccttccatcatctccacttgcagagcgcgtcaagcct
gaagaagtccccactccagcacccagtgccccgtcgctcccactgacgcctcccagtgcc
caggacaaacggcacacagaagccgaacacatggagtgtgtggtgtgcatggagaacgag
tctcaggttgtcttcctcccgtgtggacacatctgctgctgcctgccgtgcagtgaggtg
ctgcgaagctgcccgctgtgccgtagtgacatcgcccagcacatccgcatctaccgcctg
taa
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