Polypterus senegalus (gray bichir): 120543376
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Entry
120543376 CDS
T08668
Symbol
cdx1b
Name
(RefSeq) homeobox protein CDX-1b
KO
K09312
homeobox protein CDX1/4
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120543376 (cdx1b)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120543376 (cdx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF707
YdaS_toxin
Motif
Other DBs
NCBI-GeneID:
120543376
NCBI-ProteinID:
XP_039632353
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Position
13:21160314..21181567
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AA seq
259 aa
AA seq
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MYVSYLLDKDTSMYPNSVRHPSLNLNPQNFVPPPPPPQYSDFTGYHHVPGINSEPHHSQP
GGTWSPAYAPARDDWHSYGPGPTTSSSNPGQISFNPADFNPVQPPGAALLPPPINTSVAP
LSPTSQRRNPYEWLRRNVPPNSTGGKTRTKDKYRVVYTDHQRLELEKEFHYSRYITIRRK
TELAASLGLSERQVKIWFQNRRAKERKVNKKKMQQSQQATTTTPTPPGIGAAGTVGMVSS
SSGLVSPPIPITIKEEYLS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgagctaccttttggataaggacaccagcatgtacccgaattctgtgcgtcat
cccagcctgaatttgaatccacagaattttgttcctcctcctcctcctccacaatattcg
gattttacaggctatcatcacgtacctggaattaactctgagcctcaccacagtcagcca
gggggtacatggagccctgcttatgcacctgccagggatgactggcattcttacggacct
gggccaacaacgtcatcttcgaacccaggacagataagtttcaatcctgctgattttaac
cctgtacaacccccgggtgctgctttgcttcctccccctattaacacttcagtagcaccc
ctatcaccaacctcgcagagaagaaacccgtacgaatggctaaggcggaatgttccgccg
aacagtacaggaggaaaaaccagaacgaaagacaagtacagagtggtttatacagatcac
cagcgcctggagttggagaaagagttccactatagtcgatatattacgatcaggaggaaa
acggaactagcagcatctttgggtctctctgaacgacaggtaaaaatctggtttcaaaac
cgtcgagcaaaagaaagaaaggtaaacaagaaaaaaatgcagcagtcccagcaggccaca
acaacaacccctacacccccaggaattggagctgctgggacagtggggatggtcagcagc
agcagtggactggtttctcctcccatcccaattactattaaagaagagtacttgtcttag
DBGET
integrated database retrieval system
