Polypterus senegalus (gray bichir): 120543427
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Entry
120543427 CDS
T08668
Symbol
lrit1a
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1a
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
psex04990
]
120543427 (lrit1a)
Domain-containing proteins not elsewhere classified [BR:
psex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120543427 (lrit1a)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
Ig_3
LRR_1
ig
fn3
Ig_2
LRR_5
LRR_14
C2-set_3
Motif
Other DBs
NCBI-GeneID:
120543427
NCBI-ProteinID:
XP_039632493
LinkDB
All DBs
Position
1:255744183..255748529
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AA seq
647 aa
AA seq
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MFLSFSWFCCVALAGLPLAWASCISQCSCFYHNLSDGSKARSVLCNDPEISSVPANFPAD
TSKLRIEKTAIRRIPSEAFHYLSNLEFLWMSFNSLSTINVDSFRGLYSLDELRLDGNELT
SFPWESLIDMPNLRLLDLHNNQLTAVPAEATVHMKNITYLDLSSNNLVTVPSEVLAAWLS
VKPSQGAYSESSKMILGLHDNPWYCDCRLYDLVHFLKSPSSSLAFIDGRLRCSDPESLSG
VLFNEVELRKCQIPTVHTAVARVRSAVGNNVMLRCGTIGVPIPDLTWKRVDGRLLNGTVQ
QEISKEGIIWSILNVPVVSYRDSGKYICRATNFIGSADAIISLVITDFIKPENQTSMSPK
RTRSRRPNGVVKAAYQEKLVARYVVPMTTTVTPNIQINGYSDKYPDLENYSLANGQIPNP
DRSNGQPDGDKTSLSNLASNTSSLQQEPERVVRSVKVIGDTDHTVSLTWRAPQAKNTTMF
SVLYAVFGEREMRRINVDPGKNRITIDGLMPKTKYIACVCVKGLIPKKEQCVIFSTDEAA
SANGTQKLINVVVITVACVIAVPLTLIVCCGALKRRCKKLFRRKAKDIQDSYVTFETLSP
GPKAKGLEGEYLTRSNPEESNRLLSARSSLDSEATAKIEGQPNEYFC
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgtttctcagttttagttggttctgctgtgtggcactggctgggctgcctttggcatgg
gcttcgtgtatttctcagtgcagctgtttctatcataatctcagtgatggatctaaagct
aggagtgttctgtgcaacgatccagaaatatcatcagttccggcaaacttcccagcagac
acttccaaactgcgcatcgagaagacagcgataaggaggatcccaagcgaagccttccat
tacctgtccaatttggagtttctctggatgtcatttaattccttgtctactatcaatgtg
gatagctttcgcgggctttacagcttagatgagctgaggctggatggcaacgaactcact
tcctttccatgggaatctcttattgatatgccaaatttgagactgctcgacttgcacaac
aatcagctgactgcggtgccggcggaagcaacggtgcatatgaagaacatcacctatttg
gacttatcaagcaataatctggtgactgtgccctcggaggtcctcgccgcttggctcagc
gtgaaacccagtcaaggagcctacagcgaaagctcaaagatgattctaggtttacatgat
aatccctggtactgtgactgcagattgtatgaccttgtgcatttcctgaagtctccatca
tcctcactagcatttattgacggcagattaagatgttctgacccagaaagtctatctgga
gttctttttaatgaagttgaactaagaaagtgtcagatccccacagtgcatacggcagta
gcaagggtccgcagtgccgtgggtaacaatgtgatgctacgttgtggcaccattggtgtt
ccaatcccagacctcacctggaaaagagttgatggaagactactcaatgggacagtacaa
caggaaatctcaaaagaaggaataatttggtcgatattaaatgtgcctgtggtatcttac
cgggattccggcaaatacatctgcagagcgacaaacttcataggcagtgctgatgctatc
atttctcttgtaataacagacttcataaagcctgaaaatcagactagtatgtctccaaaa
agaacccggagtaggcgaccaaatggagtagtaaaagctgcatatcaagaaaaacttgtt
gctcgatatgttgttccaatgacaacaacagtgacgccaaacatccagataaatggctat
agtgacaagtaccccgaccttgaaaattatagcctagcaaatgggcaaatcccaaaccca
gacagaagtaatggccaacctgatggagacaaaaccagtctcagcaaccttgcttccaac
acctcatcactccaacaggagccagaacgtgtggtaaggtctgtaaaagtgattggggac
actgatcacacagtttctttgacatggagagctcctcaagcaaaaaataccactatgttc
agtgtgctctatgcagtgtttggagagagagaaatgcgcagaattaatgttgatccagga
aagaacaggataaccattgatggactcatgccaaagacaaagtacattgcctgtgtgtgc
gtcaaagggctgatccccaaaaaagagcagtgtgtaatcttctcaacagatgaagctgcc
agtgctaatggaactcaaaagctcattaatgttgttgtaatcactgttgcctgtgtaata
gctgtccccctgacactgattgtctgctgtggggccttgaaaaggagatgcaaaaagttg
tttaggagaaaggcaaaagatattcaagactcatatgtgacatttgagactttgtctcca
gggcctaaagcaaaaggtctcgagggagaatatctgacacggtccaaccccgaggagtct
aatcggcttttgtcagccaggtctagcttggattctgaagccacggctaagattgaaggg
caacccaatgagtacttctgttga
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