Pseudarthrobacter psychrotolerans: GU243_02100
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Entry
GU243_02100 CDS
T06403
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GU243_02100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_02100
Enzymes [BR:
psey01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
GU243_02100
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GU243_02100
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GU243_02100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
Cys_rich_KTR
TMEM106_N
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QHK18766
UniProt:
A0A6P1NEP8
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All DBs
Position
contig_1:complement(439421..440290)
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AA seq
289 aa
AA seq
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MPELPEVAGLAGFLDEHLRGAVVRKIQIVSFAVLKTADPPFTELENCTVTGVRRFGKFVS
IDTGGPSLVFHLARAGWVRFTDSPADTQLRLGKGYIAARLAFSGPDGAHGMDLTEAGTKK
SLAVYVVRDPQDVPGIAALGPDPFSASFDADMLAEILGSTSQQIKGVLRSQGVIAGIGNA
YSDEILHAARISPFATAKSLDRGTVQVLYDAIHSVLGTALAEAEGKPPSELKDVKRSHMR
VHARAGEACPVCGDTVREVSFADTSLQYCPTCQTKGKILADRRTSKFLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctacccgaggttgcaggcctggccggtttcctggacgagcacctgcgcgga
gcggtggtgcggaagatccagatcgtttcctttgcggtgctgaagacagcggatccgccg
ttcactgagctggagaactgcaccgtcacgggcgtacggcggttcggaaagtttgtcagc
attgacaccggcggtccgtcattggtcttccacctcgcccgggcggggtgggtccgcttc
accgactcccccgcagacacccagctccggctgggaaagggctacatcgccgcacggctg
gcgttcagcgggccggacggcgcccatggcatggatctcaccgaggcggggaccaaaaag
agcctggccgtgtacgtggtgcgcgatccccaggatgtgccgggcatcgcggccctcggg
ccggacccgttcagcgcatccttcgacgccgacatgctcgccgaaattctcggctccacg
tcgcagcagatcaagggcgtcctgcggagccagggcgtgatcgcggggatcgggaacgct
tacagcgacgagattctgcatgctgccaggatctctccctttgccaccgccaagtccttg
gaccgcggcacagtgcaggtgctgtatgacgccatccacagcgtgctcggaactgccctg
gctgaggccgagggcaagccacccagcgagctcaaggacgtcaaacgcagccacatgcgg
gtccacgcccgcgccggcgaggcttgcccggtgtgtggcgacacagtccgggaggtgtcc
ttcgccgatacgtccctgcagtactgtcccacgtgccagaccaaaggaaagatcctggcg
gaccgcaggacatcaaagttcctgaaataa
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