Pseudarthrobacter psychrotolerans: GU243_04135
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Entry
GU243_04135 CDS
T06403
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey03030
DNA replication
psey03410
Base excision repair
psey03420
Nucleotide excision repair
psey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU243_04135 (polA)
03410 Base excision repair
GU243_04135 (polA)
03420 Nucleotide excision repair
GU243_04135 (polA)
03440 Homologous recombination
GU243_04135 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psey03032
]
GU243_04135 (polA)
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_04135 (polA)
Enzymes [BR:
psey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU243_04135 (polA)
DNA replication proteins [BR:
psey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GU243_04135 (polA)
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GU243_04135 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GU243_04135 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
HHH_5
DNA_pol_lambd_f
Adhesin_P1_C
HHH
DUF536
Motif
Other DBs
NCBI-ProteinID:
QHK19076
UniProt:
A0A6P1NFM1
LinkDB
All DBs
Position
contig_1:883424..886261
Genome browser
AA seq
945 aa
AA seq
DB search
MATRLAPVSETTKPAPFPTETTALDAADALQDISVLAVGGQATATEAPVVPSTGQPRLLV
LDGHSMAFRAFFALPADKFSTATGQHTNAIHGFTSMLINLIKDQKPTHICVAFDVSDETT
HRKAEYSEYKGGRNETPREMSGQIDLIDKVMGAWGIKTIKLPGYEADDILATLATMGEKA
GFEVLLVSGDRDAFQLITDNVFVLYPRKGVSDIPRMDAAAIQEKYFVTPAEYSDLAALVG
ETADNLPGVPGVGPKTAAKWINLYGGLEGVLEHVDAVGGKVGESLRANVEDVKRNRRLNR
LHTDLELPLTLDDLAEPRPDEAALETLFDELEFKTIRTRLFALYGSEEVESAERESIATP
DFVFPAGAAELGAFLAAGTGKTSAVAVDLVPGRIGEDAAALAIVRDDAAAYVDLATQDAA
AENVLSDWLRDENSPKVMHGYKAALKALSARGLGMEGVVDDTSISGYLIQPDRRTYELAE
LAQHHLNVSVSSETSKAGQLELAFDGDDAAAAAVLVHVAAVVLALSRHFESELTERKAGD
LLTTLELPVSRVLADMETAGIAIDLPRMDEQIADLAKVIDNAQELAFAAIGHEVNLGSPK
QLQTVLFDELELPKTKKIKSGYTTDAASLKNLLEKTGHEFLVQLMAHRESSKLRQMLESL
KKSVTEDGRIHTTYAQNVAATGRISSNNPNLQNIPIRSEEGRRVRGIFVVSDGYECLLSA
DYSQIEMRIMAHLSGDAGLIQAYQDGEDLHRFVGSNIFHVPTEEVTSAMRSKVKAMSYGL
AYGLTSFGLSKQLEISVDEARTLMKDYFGRFGAVRDYLRGVVDQARVDGYTATIEGRRRY
LPDLTSTDRQLRENAERIALNSPIQGSAADIIKRAMLGVHAELAAQGLKSRMLLQVHDEL
VLEVAAGEREAVEKLVTEQMGSAADLSVPLDVQIGVGPSWYDAGH
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcaactaggctggcacctgtgagtgaaactaccaaaccggcccccttcccgaccgaa
actactgcgcttgacgctgctgatgccttacaggacatcagcgtcctggcggtcggaggc
caggctactgctacggaggcccccgtggttcccagcaccggccagccgcggcttctggtg
cttgacgggcactcaatggcgttccgtgcgttcttcgccctcccggcggacaagttctcc
acggccaccggacagcacaccaacgcgatccacggcttcacgtccatgctcatcaacctg
atcaaggaccagaagcccacccacatttgcgtcgccttcgacgtctcggacgagactact
caccgcaaggcggagtacagcgagtacaagggtggacgcaacgagactccccgtgagatg
agcggccagatcgacctcatcgacaaggtcatgggcgcctggggtatcaagaccatcaaa
ctccccggctatgaagccgatgacattctcgcaaccctcgccaccatgggggaaaaggcc
ggtttcgaggtgctcctcgtctcgggcgaccgcgacgccttccagctcattacggacaac
gtgtttgtgctctacccgcggaagggcgtcagtgacattccccggatggacgcggccgcc
atccaggagaaatattttgtgacgcccgccgagtattcggaccttgctgctttggtgggg
gagaccgcggataaccttccgggtgttccgggcgtcggcccgaagaccgcagcaaagtgg
atcaacctttacggcggtctcgagggggttctcgagcacgttgatgcggtcggtggaaaa
gtaggggaatccctgcgcgccaacgtcgaggacgtcaaacgcaaccgacggctgaacagg
ctccatactgacctcgaactcccgctcacgctggacgatctcgcggaaccgcgcccggac
gaggctgccttggagacgctgttcgacgaactcgaattcaagaccatccgtacccggctt
tttgccctgtacggcagcgaagaagtggaatctgcggaacgcgaaagcatcgccactccg
gactttgtgtttcccgccggggcagccgagctgggcgctttcctggcggcgggcactggc
aagacgtcggcagtcgccgtagacctggtgccggggcgaattggcgaagacgccgccgca
ctggccattgtgcgtgacgacgccgccgcctatgtcgacctcgccacccaggatgccgcc
gccgaaaacgtcctctcggactggctgcgcgatgaaaactccccgaaggtcatgcacggc
tacaaggctgcgctgaaggccctgtccgcccgtggcctgggcatggaaggcgtggtggac
gacacctcaatttccggatacctcatccagccggaccgccgcacgtatgaactcgcggag
ctggcccagcaccacctcaacgtcagcgtctcatcggagacctccaaggcgggccagctg
gagctggcgttcgacggcgacgacgccgccgctgccgctgtcctggttcatgtggcggct
gtggtcctggccctgagccggcacttcgaatcagaactcactgaacgcaaggcaggggac
ctgctgactacccttgagttgcccgtcagccgggtgctggcggacatggaaaccgcgggc
atcgccatcgacctgccgcgcatggacgagcagatcgccgatctggccaaggtgatcgac
aacgcccaggaactggccttcgccgcgatcgggcacgaggtcaatctcggttcgcccaaa
cagctgcagaccgtgctctttgacgaacttgagctgccgaaaacgaagaagatcaagtcc
ggctacaccaccgatgccgcgtcgctgaagaacctgctggagaagaccgggcacgaattc
ctggtccagctgatggcccaccgggagtcctcaaagctgcgtcagatgctggagtcgctc
aagaagtccgtgaccgaagacggccggatccacaccacctatgcacagaacgtggcagcg
accggccggatctcctcgaacaaccccaacctgcagaacatccccatccgcagcgaagag
ggccggcgcgtccgtggcatctttgtggtcagtgacggctacgagtgcctgttgtccgcg
gactactcgcagatcgaaatgcggatcatggcgcacctctcgggggatgcaggcctgatc
caggcctaccaggacggcgaggacctccaccggtttgtgggttcgaacatcttccacgtg
cccaccgaggaagtcaccagcgccatgcgctccaaggtcaaagccatgtcctacggcctc
gcctacggcctgacctcgttcggcctgtccaagcagctggaaatttccgtggacgaggcc
cgcaccctgatgaaggactacttcggccggttcggcgccgtccgcgactacctgcgcggc
gtggtggaccaggcccgggtggacggctacacggccaccatcgaggggcgtcgccgctac
ctgccggacctcaccagcacggaccggcagctgcgcgaaaacgcggagcgcatcgcactg
aactcacccatccagggatctgccgcggacatcattaaacgcgccatgctgggtgtacat
gctgaactggcggcccagggcctgaagtcgcgtatgctcctgcaggtccacgacgaactg
gtgcttgaagtcgccgccggcgagcgggaagcggtggagaagctcgttaccgagcagatg
ggctctgccgcggacctcagcgtcccgctggatgtccagatcggcgtgggccccagctgg
tacgacgccggccactag
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