Pseudarthrobacter psychrotolerans: GU243_04965
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Entry
GU243_04965 CDS
T06403
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey03030
DNA replication
psey03430
Mismatch repair
psey03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GU243_04965 (holA)
03430 Mismatch repair
GU243_04965 (holA)
03440 Homologous recombination
GU243_04965 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psey03032
]
GU243_04965 (holA)
03400 DNA repair and recombination proteins [BR:
psey03400
]
GU243_04965 (holA)
Enzymes [BR:
psey01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GU243_04965 (holA)
DNA replication proteins [BR:
psey03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GU243_04965 (holA)
DNA repair and recombination proteins [BR:
psey03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GU243_04965 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_gamma3
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QHK19211
UniProt:
A0A6P1NR29
LinkDB
All DBs
Position
contig_1:complement(1065619..1066635)
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AA seq
338 aa
AA seq
DB search
MAAAQTTRTRTPASNTATWRDVTPAEIVLVGGPEEYLGIRAMDHIRAQVRTAFPDVEVSR
LTAGTYETGTLAMNVSPSLFGERKLIEVEGVESMNDAFLADALTYLARPEPDAVLVLRHA
GGVRGKKLLDAVKAGGWPVVDCQPLKKDADKATFVATEFRAAGRKISSDAVQTLVNAVGA
NLSELAAACSQLIADATGAVTPEMVDRYYGGRIEATAFKVADAAMAGNGPVALSTLRHAL
ATGADPVPLVAALAAKLRTVAKVAGAQGSPAQIARELGMQPWLVEQAQRDVRRWTPEGLV
RSIQATAEADAQVKGLSRDPVYAVEHAVTVIATSVRGH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagcccagaccacacgaaccaggactccggcgtccaacacggccacctggcgg
gacgtgacgcctgccgaaatcgtcctggtgggcggaccggaggaatacctcggcatccgt
gccatggaccatatccgcgcccaggtgcgaacggcgttccccgacgtcgaagtcagccgc
ctcacggccggcacctacgaaaccgggaccctcgccatgaacgtcagcccctcccttttc
ggtgagcgcaaactgatcgaggtcgaaggcgttgaaagcatgaacgatgccttcctggcc
gacgcactgacctacctggcccgcccggagccggatgcggtgctcgtcctgcgccacgcc
gggggagtccgcggcaagaagctcctcgatgccgtcaaagcgggcggctggcccgtagtg
gactgccagcccctgaagaaggatgcggataaggccacgttcgtggcaactgaattcagg
gccgccggacggaaaatcagctcggacgccgtacagacgctggtcaatgccgtcggcgcc
aacctttcggaactcgcggcggcgtgcagccaactgatcgcagatgccaccggtgcagtg
accccggagatggtggaccgctactacggcggccggatcgaagccacggccttcaaggtc
gcggacgccgccatggccggaaacgggccagtagcgctctccacccttcgccacgcgctg
gccaccggagccgatccggttccgttggtggcggcgctggcagccaagctccggacggtg
gccaaagttgccggcgcccaggggtccccggcgcagatcgcccgggaactgggcatgcag
ccctggcttgtggagcaggcccagcgcgatgtgcgccggtggaccccggagggcctggtc
cgctccatccaggccactgccgaggctgatgcgcaggtcaagggtctttcgcgcgatcct
gtctatgccgttgaacatgcggtgaccgtcattgcaacctctgtgcgcgggcactga
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