Pseudarthrobacter psychrotolerans: GU243_06320
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Entry
GU243_06320 CDS
T06403
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20539
IclR family transcriptional regulator, blcABC operon repressor
Organism
psey
Pseudarthrobacter psychrotolerans
Pathway
psey02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
psey00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GU243_06320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psey03000
]
GU243_06320
Transcription factors [BR:
psey03000
]
Prokaryotic type
Helix-turn-helix
IclR family
GU243_06320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
MarR
HTH_24
DUF7343
HTH_20
HTH_Crp_2
HTH_CodY
DUF5800
TrmB
TFIIE_alpha
HTH_27
HTH_9
Rrf2
DUF4423
Dimerisation
HTH_10
DUF4143
HTH_Cmi2_C
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
QHK19424
UniProt:
A0A6P1NLM5
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All DBs
Position
contig_1:complement(1338004..1338801)
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AA seq
265 aa
AA seq
DB search
MADSRTPRSSEGLGSTSPAPAVTRAAAVMDALAASATGRLTLSDLARELGIPKSSTSNLL
LALEEARLISRQGAEFTLGRKLVELGAAYLSRLDEVQEFYKFCEQAPTLSGETVRIAMLD
GTNVIYLARYEGHPAVRLTSNIGDKMPVSLCAVGKALIARLHDHDIEAMFSDDAELPVLT
PKSLRTGAELKAQLTTIREQGYAFEDEESTTGVVCLAVSVPTRGAHGPSLGLSVTALKAT
YSEEQGSRMVKELNELARSLGNPMG
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggccgattcccgcaccccccgctcctccgagggtttggggagcacatcgcccgccccg
gcggtcacgcgtgccgccgccgtcatggacgcgctggcggcctctgctaccggaaggctg
acactgagcgacctggcccgcgagctgggaatccccaagtcgtccacctccaacctgttg
ctggcgttggaagaagccaggctgatcagccgccagggcgccgaattcacgctgggccgc
aagctcgtggagctcggtgccgcgtatctcagccggctcgacgaagtgcaggagttctac
aagttctgcgagcaggcgccgacactttccggggagacagtacgcatcgccatgctggac
ggaaccaacgtgatctatctggcccgctacgaggggcatccggcggtccgcctgacgtcc
aacatcggcgacaagatgccagtgtcactgtgtgccgtgggcaaggccctgattgcccgc
cttcatgaccacgacatcgaggcaatgttttccgatgacgccgagcttcccgtactgacc
cccaagtccctccgcacaggggccgagttgaaggcccagctgaccaccatccgtgaacag
ggctatgcgttcgaagatgaggaatccactacgggagtagtctgcctggccgtctcggtt
ccgacgcgcggcgcccatggccccagccttggtttgtcagtcacggcactgaaggccaca
tactccgaggagcagggttcccggatggtcaaggaactgaacgaactggcgcggtccttg
ggcaaccccatgggctaa
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